RNA–Protein interactions for RNA: ENST00000418518.2

LINCMD1-201, Transcript of long intergenic non-protein coding RNA, muscle differentiation 1, humanhuman

TSL 5 BASIC

Gene LINCMD1, Length 462 nt, Biotype lincRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINCMD1-201ENST00000418518 FGF6P10767 208 aa6.56□□□□□ -1.36
LINCMD1-201ENST00000418518 ANKRD39Q53RE8 183 aa6.56□□□□□ -1.36
LINCMD1-201ENST00000418518 FAM74A4Q5TZK3 123 aa6.56□□□□□ -1.36
LINCMD1-201ENST00000418518 CFAP126Q5VTH2 177 aa6.56□□□□□ -1.36
LINCMD1-201ENST00000418518 C2orf66Q6UXQ4 117 aa6.56□□□□□ -1.36
LINCMD1-201ENST00000418518 ZFP2Q6ZN57 461 aa6.56□□□□□ -1.36
LINCMD1-201ENST00000418518 ERASQ7Z444 233 aa6.56□□□□□ -1.36
LINCMD1-201ENST00000418518 RNASE8Q8TDE3 154 aaKnown RBP6.56□□□□□ -1.36
LINCMD1-201ENST00000418518 TMEM263Q8WUH6 116 aaKnown RBP6.56□□□□□ -1.36
LINCMD1-201ENST00000418518 KIR2DL4Q99706 377 aa6.56□□□□□ -1.36
LINCMD1-201ENST00000418518 XCL2Q9UBD3 114 aa6.56□□□□□ -1.36
LINCMD1-201ENST00000418518 DKK2Q9UBU2 259 aa6.56□□□□□ -1.36
LINCMD1-201ENST00000418518 CYSLTR1Q9Y271 337 aa6.56□□□□□ -1.36
LINCMD1-201ENST00000418518 IGKCP01834 107 aa6.55□□□□□ -1.36
LINCMD1-201ENST00000418518 PRSS1P07477 247 aa6.55□□□□□ -1.36
LINCMD1-201ENST00000418518 LURAP1LQ8IV03 231 aa6.55□□□□□ -1.36
LINCMD1-201ENST00000418518 NEXN-AS1Q8NBZ9 246 aa6.55□□□□□ -1.36
LINCMD1-201ENST00000418518 SCGB3A1Q96QR1 104 aa6.55□□□□□ -1.36
LINCMD1-201ENST00000418518 TIMM17AQ99595 171 aa6.55□□□□□ -1.36
LINCMD1-201ENST00000418518 CITED1Q99966 193 aa6.55□□□□□ -1.36
LINCMD1-201ENST00000418518 C1QTNF4Q9BXJ3 329 aa6.55□□□□□ -1.36
LINCMD1-201ENST00000418518 HHLA3Q9XRX5 114 aa6.55□□□□□ -1.36
LINCMD1-201ENST00000418518 IGIPA6NJ69 53 aa6.54□□□□□ -1.36
LINCMD1-201ENST00000418518 F8VRH5 84 aa6.54□□□□□ -1.36
LINCMD1-201ENST00000418518 TSHBP01222 138 aa6.54□□□□□ -1.36
LINCMD1-201ENST00000418518 IGHV3-53P01767 116 aa6.54□□□□□ -1.36
LINCMD1-201ENST00000418518 AZU1P20160 251 aa6.54□□□□□ -1.36
LINCMD1-201ENST00000418518 C9orf66Q5T8R8 295 aa6.54□□□□□ -1.36
LINCMD1-201ENST00000418518 NEGR1Q7Z3B1 354 aa6.54□□□□□ -1.36
LINCMD1-201ENST00000418518 BOD1L2Q8IYS8 172 aa6.54□□□□□ -1.36
LINCMD1-201ENST00000418518 CSNK1G2-AS1Q8NCQ2 148 aa6.54□□□□□ -1.36
LINCMD1-201ENST00000418518 BAALCQ8WXS3 180 aa6.54□□□□□ -1.36
LINCMD1-201ENST00000418518 TMEM141Q96I45 108 aa6.54□□□□□ -1.36
LINCMD1-201ENST00000418518 MRPL35Q9NZE8 188 aaKnown RBP6.54□□□□□ -1.36
LINCMD1-201ENST00000418518 NOTCH3Q9UM47 2321 aa6.54□□□□□ -1.36
LINCMD1-201ENST00000418518 I3L3M4 83 aa6.53□□□□□ -1.36
LINCMD1-201ENST00000418518 PRM2P04554 102 aa6.53□□□□□ -1.36
LINCMD1-201ENST00000418518 HTN1P15515 57 aa6.53□□□□□ -1.36
LINCMD1-201ENST00000418518 PLNP26678 52 aa6.53□□□□□ -1.36
LINCMD1-201ENST00000418518 DAZ2Q13117 558 aaKnown RBP6.53□□□□□ -1.36
LINCMD1-201ENST00000418518 C2orf91Q6ZV80 131 aa6.53□□□□□ -1.36
LINCMD1-201ENST00000418518 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP6.53□□□□□ -1.36
LINCMD1-201ENST00000418518 DNAJC30Q96LL9 226 aa6.53□□□□□ -1.36
LINCMD1-201ENST00000418518 WFDC10AQ9H1F0 79 aa6.53□□□□□ -1.36
LINCMD1-201ENST00000418518 TP53TG1Q9Y2A0 90 aa6.53□□□□□ -1.36
LINCMD1-201ENST00000418518 TEP1Q99973 2627 aaKnown RBP6.52□□□□□ -1.37
LINCMD1-201ENST00000418518 PLAC8L1A1L4L8 177 aa6.52□□□□□ -1.37
LINCMD1-201ENST00000418518 SIVA1O15304 175 aa6.52□□□□□ -1.37
LINCMD1-201ENST00000418518 WIPF1O43516 503 aa6.52□□□□□ -1.37
LINCMD1-201ENST00000418518 NPSP0C0P6 89 aa6.52□□□□□ -1.37
LINCMD1-201ENST00000418518 STPG4Q8N801 248 aa6.52□□□□□ -1.37
LINCMD1-201ENST00000418518 C20orf203Q8NBC4 194 aa6.52□□□□□ -1.37
LINCMD1-201ENST00000418518 C16orf74Q96GX8 76 aa6.52□□□□□ -1.37
LINCMD1-201ENST00000418518 TMEM208Q9BTX3 173 aa6.52□□□□□ -1.37
LINCMD1-201ENST00000418518 MRPL16Q9NX20 251 aaKnown RBP6.52□□□□□ -1.37
LINCMD1-201ENST00000418518 TRAV4A0A0B4J268 109 aa6.51□□□□□ -1.37
LINCMD1-201ENST00000418518 CIDEAO60543 219 aa6.51□□□□□ -1.37
LINCMD1-201ENST00000418518 P0DMU3 169 aa6.51□□□□□ -1.37
LINCMD1-201ENST00000418518 FAM231AP0DMU4 169 aa6.51□□□□□ -1.37
LINCMD1-201ENST00000418518 FAM231CP0DMU5 169 aa6.51□□□□□ -1.37
LINCMD1-201ENST00000418518 Q6ZSN1 163 aa6.51□□□□□ -1.37
LINCMD1-201ENST00000418518 OVOL2Q9BRP0 275 aa6.51□□□□□ -1.37
LINCMD1-201ENST00000418518 TP73-AS1Q9UF72 201 aa6.51□□□□□ -1.37
LINCMD1-201ENST00000418518 CHTOPQ9Y3Y2 248 aaKnown RBP6.51□□□□□ -1.37
LINCMD1-201ENST00000418518 ATRQ13535 2644 aa6.5□□□□□ -1.37
LINCMD1-201ENST00000418518 TRBV10-1A0A0K0K1A3 114 aa6.5□□□□□ -1.37
LINCMD1-201ENST00000418518 A0A1B0GV90 55 aa6.5□□□□□ -1.37
LINCMD1-201ENST00000418518 PRSS29PA6NIE9 313 aa6.5□□□□□ -1.37
LINCMD1-201ENST00000418518 RPL35AP18077 110 aaKnown RBP6.5□□□□□ -1.37
LINCMD1-201ENST00000418518 CRYBA4P53673 196 aa6.5□□□□□ -1.37
LINCMD1-201ENST00000418518 RPL39P62891 51 aaKnown RBP6.5□□□□□ -1.37
LINCMD1-201ENST00000418518 PMVKQ15126 192 aa6.5□□□□□ -1.37
LINCMD1-201ENST00000418518 PAPPA-AS1Q5QFB9 102 aa6.5□□□□□ -1.37
LINCMD1-201ENST00000418518 COL5A1-AS1Q5SY13 56 aa6.5□□□□□ -1.37
LINCMD1-201ENST00000418518 ZC2HC1BQ5TFG8 222 aa6.5□□□□□ -1.37
LINCMD1-201ENST00000418518 WFDC9Q8NEX5 89 aa6.5□□□□□ -1.37
LINCMD1-201ENST00000418518 HIGD1BQ9P298 99 aa6.5□□□□□ -1.37
LINCMD1-201ENST00000418518 PYGO1Q9Y3Y4 419 aa6.5□□□□□ -1.37
LINCMD1-201ENST00000418518 FLNBO75369 2602 aaKnown RBP6.49□□□□□ -1.37
LINCMD1-201ENST00000418518 NIPBLQ6KC79 2804 aaeCLIP6.49□□□□□ -1.37
LINCMD1-201ENST00000418518 IGLV4-69A0A075B6H9 119 aa6.49□□□□□ -1.37
LINCMD1-201ENST00000418518 IGKV2D-26A0A0A0MRZ7 120 aa6.49□□□□□ -1.37
LINCMD1-201ENST00000418518 C12orf54Q6X4T0 127 aa6.49□□□□□ -1.37
LINCMD1-201ENST00000418518 SPATA3Q8NHX4 192 aa6.49□□□□□ -1.37
LINCMD1-201ENST00000418518 TNFRSF18Q9Y5U5 241 aa6.49□□□□□ -1.37
LINCMD1-201ENST00000418518 TENM1Q9UKZ4 2725 aa6.49□□□□□ -1.37
LINCMD1-201ENST00000418518 IGHV3OR16-12A0A075B7B8 117 aa6.48□□□□□ -1.37
LINCMD1-201ENST00000418518 TRGV1A0A0A0MS02 117 aa6.48□□□□□ -1.37
LINCMD1-201ENST00000418518 IGHV3-73A0A0B4J1V6 119 aa6.48□□□□□ -1.37
LINCMD1-201ENST00000418518 RRN3P1Q2M238 152 aa6.48□□□□□ -1.37
LINCMD1-201ENST00000418518 BVES-AS1Q5T3Y7 98 aa6.48□□□□□ -1.37
LINCMD1-201ENST00000418518 Q6ZTI0 123 aa6.48□□□□□ -1.37
LINCMD1-201ENST00000418518 GTSCR1Q86UQ5 136 aa6.48□□□□□ -1.37
LINCMD1-201ENST00000418518 NFE4Q86UQ8 179 aa6.48□□□□□ -1.37
LINCMD1-201ENST00000418518 PCP2Q8IVA1 136 aa6.48□□□□□ -1.37
LINCMD1-201ENST00000418518 LINC00612Q8N6U2 182 aa6.48□□□□□ -1.37
LINCMD1-201ENST00000418518 OR4C5Q8NGB2 326 aa6.48□□□□□ -1.37
LINCMD1-201ENST00000418518 CHCHD7Q9BUK0 85 aa6.48□□□□□ -1.37
LINCMD1-201ENST00000418518 CST9LQ9H4G1 147 aa6.48□□□□□ -1.37
LINCMD1-201ENST00000418518 VWFP04275 2813 aa6.48□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 59.3 ms