RNA–Protein interactions for RNA: ENST00000417496.6

HDAC9-208, Transcript of histone deacetylase 9, humanhuman

TSL 2 BASIC

Gene HDAC9, Length 2,524 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-208ENST00000417496 RBMY1A1P0DJD3 496 aaKnown RBP10.69□□□□□ -0.7
HDAC9-208ENST00000417496 RBMY1CP0DJD4 496 aa10.69□□□□□ -0.7
HDAC9-208ENST00000417496 HOXD3P31249 432 aaPredicted RBP10.69□□□□□ -0.7
HDAC9-208ENST00000417496 RBMY1FQ15415 496 aaKnown RBP10.69□□□□□ -0.7
HDAC9-208ENST00000417496 TMEM141Q96I45 108 aa10.69□□□□□ -0.7
HDAC9-208ENST00000417496 TIMM17AQ99595 171 aa10.69□□□□□ -0.7
HDAC9-208ENST00000417496 TSSC4Q9Y5U2 329 aaPredicted RBP10.69□□□□□ -0.7
HDAC9-208ENST00000417496 NAV2Q8IVL1 2488 aa10.69□□□□□ -0.7
HDAC9-208ENST00000417496 KNCNA6PVL3 124 aa10.68□□□□□ -0.7
HDAC9-208ENST00000417496 UBE2D1P51668 147 aa10.68□□□□□ -0.7
HDAC9-208ENST00000417496 Q9UF83 564 aa10.68□□□□□ -0.7
HDAC9-208ENST00000417496 HERVK_113P61574 105 aa10.68□□□□□ -0.7
HDAC9-208ENST00000417496 BEX4Q9NWD9 120 aaPredicted RBP10.68□□□□□ -0.7
HDAC9-208ENST00000417496 ZNF580Q9UK33 172 aa10.68□□□□□ -0.7
HDAC9-208ENST00000417496 TRBV6-5A0A0K0K1A5 114 aa10.67□□□□□ -0.7
HDAC9-208ENST00000417496 PSMB2P49721 201 aa10.67□□□□□ -0.7
HDAC9-208ENST00000417496 SYT8Q8NBV8 401 aa10.67□□□□□ -0.7
HDAC9-208ENST00000417496 ZNF469Q96JG9 3925 aaPredicted RBP10.67□□□□□ -0.7
HDAC9-208ENST00000417496 TMEM238C9JI98 176 aa10.67□□□□□ -0.7
HDAC9-208ENST00000417496 DUX3Q96PT4 197 aa10.67□□□□□ -0.7
HDAC9-208ENST00000417496 TMEM238LA0A1B0GVL6 79 aa10.66□□□□□ -0.7
HDAC9-208ENST00000417496 A6NJY4 79 aa10.66□□□□□ -0.7
HDAC9-208ENST00000417496 J3QQQ9 107 aa10.66□□□□□ -0.7
HDAC9-208ENST00000417496 PAPPA-AS1Q5QFB9 102 aa10.66□□□□□ -0.7
HDAC9-208ENST00000417496 LINC01356Q8N9X3 169 aa10.66□□□□□ -0.7
HDAC9-208ENST00000417496 AMELXQ99217 191 aa10.66□□□□□ -0.7
HDAC9-208ENST00000417496 EPG5Q9HCE0 2579 aa10.66□□□□□ -0.7
HDAC9-208ENST00000417496 SMCPP49901 116 aaPredicted RBP10.66□□□□□ -0.7
HDAC9-208ENST00000417496 SAMD13Q5VXD3 122 aa10.66□□□□□ -0.7
HDAC9-208ENST00000417496 CEMP1Q6PRD7 247 aaPredicted RBP10.66□□□□□ -0.7
HDAC9-208ENST00000417496 NDUFA11Q86Y39 141 aa10.66□□□□□ -0.7
HDAC9-208ENST00000417496 SONP18583 2426 aaKnown RBP10.66□□□□□ -0.7
HDAC9-208ENST00000417496 IGHV3-30P01768 117 aa10.65□□□□□ -0.7
HDAC9-208ENST00000417496 CFC1BP0CG36 223 aa10.65□□□□□ -0.7
HDAC9-208ENST00000417496 CFC1P0CG37 223 aa10.65□□□□□ -0.7
HDAC9-208ENST00000417496 IGHV3-30-5P0DP03 117 aa10.65□□□□□ -0.7
HDAC9-208ENST00000417496 SMAGPQ0VAQ4 97 aa10.65□□□□□ -0.7
HDAC9-208ENST00000417496 TCTEX1D4Q5JR98 221 aa10.65□□□□□ -0.7
HDAC9-208ENST00000417496 ZNF418Q8TF45 676 aaPredicted RBP10.65□□□□□ -0.7
HDAC9-208ENST00000417496 NOTCH3Q9UM47 2321 aa10.65□□□□□ -0.7
HDAC9-208ENST00000417496 SETD2Q9BYW2 2564 aaPredicted RBP10.65□□□□□ -0.7
HDAC9-208ENST00000417496 NF1P21359 2839 aa10.65□□□□□ -0.7
HDAC9-208ENST00000417496 A0A0J9YXV3 536 aa10.65□□□□□ -0.7
HDAC9-208ENST00000417496 AZU1P20160 251 aa10.65□□□□□ -0.7
HDAC9-208ENST00000417496 SLURP1P55000 103 aa10.65□□□□□ -0.7
HDAC9-208ENST00000417496 RNASE13Q5GAN3 156 aaKnown RBP10.65□□□□□ -0.7
HDAC9-208ENST00000417496 TRPT1Q86TN4 253 aaKnown RBP10.65□□□□□ -0.7
HDAC9-208ENST00000417496 PTH2Q96A98 100 aa10.65□□□□□ -0.7
HDAC9-208ENST00000417496 GAGE12HA6NDE8 117 aa10.64□□□□□ -0.71
HDAC9-208ENST00000417496 SLC25A29Q8N8R3 303 aa10.64□□□□□ -0.71
HDAC9-208ENST00000417496 C20orf203Q8NBC4 194 aa10.64□□□□□ -0.71
HDAC9-208ENST00000417496 ODF3Q96PU9 254 aa10.64□□□□□ -0.71
HDAC9-208ENST00000417496 CHD6Q8TD26 2715 aa10.64□□□□□ -0.71
HDAC9-208ENST00000417496 LGALS3P17931 250 aaKnown RBP10.64□□□□□ -0.71
HDAC9-208ENST00000417496 GATA3P23771 443 aa10.64□□□□□ -0.71
HDAC9-208ENST00000417496 NIPBLQ6KC79 2804 aaeCLIP10.64□□□□□ -0.71
HDAC9-208ENST00000417496 ADARB2-AS1A8MUL3 147 aa10.63□□□□□ -0.71
HDAC9-208ENST00000417496 DEFB131AP59861 70 aa10.63□□□□□ -0.71
HDAC9-208ENST00000417496 NSUN5P1Q3KNT7 163 aa10.63□□□□□ -0.71
HDAC9-208ENST00000417496 A0A096LNT2 108 aa10.63□□□□□ -0.71
HDAC9-208ENST00000417496 I3L3M4 83 aa10.63□□□□□ -0.71
HDAC9-208ENST00000417496 PRB1P04280 392 aa10.63□□□□□ -0.71
HDAC9-208ENST00000417496 CFAP126Q5VTH2 177 aa10.63□□□□□ -0.71
HDAC9-208ENST00000417496 DLX4Q92988 240 aaPredicted RBP10.63□□□□□ -0.71
HDAC9-208ENST00000417496 ZNF702PQ9H963 129 aa10.63□□□□□ -0.71
HDAC9-208ENST00000417496 RAX2Q96IS3 184 aa10.62□□□□□ -0.71
HDAC9-208ENST00000417496 VPREB3Q9UKI3 123 aa10.62□□□□□ -0.71
HDAC9-208ENST00000417496 IGLV4-3A0A075B6K6 122 aa10.62□□□□□ -0.71
HDAC9-208ENST00000417496 TMEM223A0PJW6 202 aa10.62□□□□□ -0.71
HDAC9-208ENST00000417496 NFE4Q86UQ8 179 aa10.62□□□□□ -0.71
HDAC9-208ENST00000417496 SPXQ9BT56 116 aa10.62□□□□□ -0.71
HDAC9-208ENST00000417496 VCX2Q9H322 139 aa10.62□□□□□ -0.71
HDAC9-208ENST00000417496 WNK1Q9H4A3 2382 aa10.62□□□□□ -0.71
HDAC9-208ENST00000417496 ZNF22P17026 224 aaPredicted RBP10.61□□□□□ -0.71
HDAC9-208ENST00000417496 Q6ZSN1 163 aa10.61□□□□□ -0.71
HDAC9-208ENST00000417496 SIGMAR1Q99720 223 aa10.61□□□□□ -0.71
HDAC9-208ENST00000417496 RBMY1BA6NDE4 496 aaKnown RBP10.61□□□□□ -0.71
HDAC9-208ENST00000417496 RBMY1EA6NEQ0 496 aaKnown RBP10.61□□□□□ -0.71
HDAC9-208ENST00000417496 H7C2G1 150 aa10.61□□□□□ -0.71
HDAC9-208ENST00000417496 EIF4EBP3O60516 100 aaPredicted RBP10.61□□□□□ -0.71
HDAC9-208ENST00000417496 TCL1BO95988 128 aa10.61□□□□□ -0.71
HDAC9-208ENST00000417496 RBMY1DP0C7P1 496 aaKnown RBP10.61□□□□□ -0.71
HDAC9-208ENST00000417496 UBE2D3P61077 147 aa10.61□□□□□ -0.71
HDAC9-208ENST00000417496 UBE2D2P62837 147 aa10.61□□□□□ -0.71
HDAC9-208ENST00000417496 RHOHQ15669 191 aa10.61□□□□□ -0.71
HDAC9-208ENST00000417496 TRAV2A0A0B4J234 112 aa10.6□□□□□ -0.71
HDAC9-208ENST00000417496 A4D1N5 150 aa10.6□□□□□ -0.71
HDAC9-208ENST00000417496 J3QR89 54 aa10.6□□□□□ -0.71
HDAC9-208ENST00000417496 RHODO00212 210 aa10.6□□□□□ -0.71
HDAC9-208ENST00000417496 FAM104AQ969W3 186 aa10.6□□□□□ -0.71
HDAC9-208ENST00000417496 UBE2E2Q96LR5 201 aa10.6□□□□□ -0.71
HDAC9-208ENST00000417496 AKAP9Q99996 3911 aa10.6□□□□□ -0.71
HDAC9-208ENST00000417496 C2CD3Q4AC94 2353 aa10.59□□□□□ -0.71
HDAC9-208ENST00000417496 TRGV11A0A075B6L2 103 aa10.59□□□□□ -0.71
HDAC9-208ENST00000417496 TRAV8-3A0A0A6YYJ7 113 aa10.59□□□□□ -0.71
HDAC9-208ENST00000417496 TMEM89A2RUT3 159 aa10.59□□□□□ -0.71
HDAC9-208ENST00000417496 ELANEP08246 267 aa10.59□□□□□ -0.71
HDAC9-208ENST00000417496 DSCR9P59020 149 aa10.59□□□□□ -0.71
HDAC9-208ENST00000417496 Q6YL49 198 aa10.59□□□□□ -0.71
HDAC9-208ENST00000417496 C10orf126Q8N4M7 172 aa10.59□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms