RNA–Protein interactions for RNA: ENST00000417137.5

SMARCB1-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 3

Gene SMARCB1, Length 889 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-205ENST00000417137 UBE2D2P62837 147 aa15.79■□□□□ 0.12
SMARCB1-205ENST00000417137 C1orf134Q5TEV5 83 aa15.79■□□□□ 0.12
SMARCB1-205ENST00000417137 SUMO4Q6EEV6 95 aa15.79■□□□□ 0.12
SMARCB1-205ENST00000417137 NUP35Q8NFH5 326 aa15.79■□□□□ 0.12
SMARCB1-205ENST00000417137 DNAJC30Q96LL9 226 aa15.79■□□□□ 0.12
SMARCB1-205ENST00000417137 TNFRSF18Q9Y5U5 241 aa15.79■□□□□ 0.12
SMARCB1-205ENST00000417137 TMEM218A2RU14 115 aa15.78■□□□□ 0.12
SMARCB1-205ENST00000417137 LINC00862A6NCI5 91 aa15.78■□□□□ 0.12
SMARCB1-205ENST00000417137 WFDC10BQ8IUB3 73 aa15.78■□□□□ 0.12
SMARCB1-205ENST00000417137 MT-ND4LP03901 98 aa15.77■□□□□ 0.12
SMARCB1-205ENST00000417137 RASL11AQ6T310 242 aa15.77■□□□□ 0.12
SMARCB1-205ENST00000417137 IGHV3-38A0A0C4DH36 116 aa15.76■□□□□ 0.11
SMARCB1-205ENST00000417137 F8W036 122 aa15.76■□□□□ 0.11
SMARCB1-205ENST00000417137 DNAH10OSP0CZ25 163 aa15.76■□□□□ 0.11
SMARCB1-205ENST00000417137 BTF3P20290 206 aaKnown RBP15.76■□□□□ 0.11
SMARCB1-205ENST00000417137 ANAPC16Q96DE5 110 aa15.76■□□□□ 0.11
SMARCB1-205ENST00000417137 LINC00336Q6ZUF6 198 aa15.75■□□□□ 0.11
SMARCB1-205ENST00000417137 DAZ4Q86SG3 579 aaKnown RBP15.75■□□□□ 0.11
SMARCB1-205ENST00000417137 NIT2Q9NQR4 276 aa15.75■□□□□ 0.11
SMARCB1-205ENST00000417137 DAZ3Q9NR90 486 aaKnown RBP15.75■□□□□ 0.11
SMARCB1-205ENST00000417137 DNAH6Q9C0G6 4158 aa15.75■□□□□ 0.11
SMARCB1-205ENST00000417137 TMEM97Q5BJF2 176 aa15.74■□□□□ 0.11
SMARCB1-205ENST00000417137 C6orf223Q8N319 242 aa15.74■□□□□ 0.11
SMARCB1-205ENST00000417137 FRZBQ92765 325 aa15.74■□□□□ 0.11
SMARCB1-205ENST00000417137 TMEM191AQ9H0A3 160 aa15.74■□□□□ 0.11
SMARCB1-205ENST00000417137 A0A1B0GW15 77 aa15.73■□□□□ 0.11
SMARCB1-205ENST00000417137 C10orf126Q8N4M7 172 aa15.73■□□□□ 0.11
SMARCB1-205ENST00000417137 SEC11CQ9BY50 192 aa15.73■□□□□ 0.11
SMARCB1-205ENST00000417137 LINC01556Q5JQF7 62 aa15.72■□□□□ 0.11
SMARCB1-205ENST00000417137 GATD1Q8NB37 220 aa15.71■□□□□ 0.11
SMARCB1-205ENST00000417137 KRTAP1-5Q9BYS1 174 aa15.71■□□□□ 0.11
SMARCB1-205ENST00000417137 S100A8P05109 93 aa15.7■□□□□ 0.1
SMARCB1-205ENST00000417137 TRBV6-8A0A0A6YYG3 113 aa15.69■□□□□ 0.1
SMARCB1-205ENST00000417137 RTL8CO15255 209 aa15.69■□□□□ 0.1
SMARCB1-205ENST00000417137 ADCYAP1P18509 176 aa15.69■□□□□ 0.1
SMARCB1-205ENST00000417137 KCNIP4Q6PIL6 250 aa15.69■□□□□ 0.1
SMARCB1-205ENST00000417137 KRTAP17-1Q9BYP8 105 aa15.69■□□□□ 0.1
SMARCB1-205ENST00000417137 TRAV26-2A0A0B4J265 109 aa15.68■□□□□ 0.1
SMARCB1-205ENST00000417137 URGCP-MRPS24S4R325 110 aa15.68■□□□□ 0.1
SMARCB1-205ENST00000417137 CAMPP49913 170 aa15.67■□□□□ 0.1
SMARCB1-205ENST00000417137 MRAP2Q96G30 205 aa15.67■□□□□ 0.1
SMARCB1-205ENST00000417137 IGHV3-30P01768 117 aa15.66■□□□□ 0.1
SMARCB1-205ENST00000417137 IGHV3-33P01772 117 aa15.66■□□□□ 0.1
SMARCB1-205ENST00000417137 IGHV3-30-3P0DP02 117 aa15.66■□□□□ 0.1
SMARCB1-205ENST00000417137 IGHV3-30-5P0DP03 117 aa15.66■□□□□ 0.1
SMARCB1-205ENST00000417137 RAB4AP20338 218 aa15.66■□□□□ 0.1
SMARCB1-205ENST00000417137 NFE4Q86UQ8 179 aa15.66■□□□□ 0.1
SMARCB1-205ENST00000417137 PRSS29PA6NIE9 313 aa15.65■□□□□ 0.1
SMARCB1-205ENST00000417137 HBBP68871 147 aa15.65■□□□□ 0.1
SMARCB1-205ENST00000417137 MRPL54Q6P161 138 aaKnown RBP15.65■□□□□ 0.1
SMARCB1-205ENST00000417137 ATP5L2Q7Z4Y8 100 aa15.65■□□□□ 0.1
SMARCB1-205ENST00000417137 AMN1Q8IY45 258 aa15.65■□□□□ 0.1
SMARCB1-205ENST00000417137 RNF185Q96GF1 192 aa15.65■□□□□ 0.1
SMARCB1-205ENST00000417137 PKIAP61925 76 aa15.64■□□□□ 0.09
SMARCB1-205ENST00000417137 NIT1Q86X76 327 aa15.64■□□□□ 0.09
SMARCB1-205ENST00000417137 CHCHD7Q9BUK0 85 aa15.64■□□□□ 0.09
SMARCB1-205ENST00000417137 CTDSP1Q9GZU7 261 aa15.64■□□□□ 0.09
SMARCB1-205ENST00000417137 TRBV25-1A0A075B6N4 114 aa15.63■□□□□ 0.09
SMARCB1-205ENST00000417137 A0A087WX48 190 aa15.63■□□□□ 0.09
SMARCB1-205ENST00000417137 PPP1R17O96001 155 aa15.63■□□□□ 0.09
SMARCB1-205ENST00000417137 C10orf91Q5T1B1 145 aa15.63■□□□□ 0.09
SMARCB1-205ENST00000417137 FAM104BQ5XKR9 115 aa15.63■□□□□ 0.09
SMARCB1-205ENST00000417137 RPL39LQ96EH5 51 aaKnown RBP15.63■□□□□ 0.09
SMARCB1-205ENST00000417137 IGHV1-24A0A0C4DH33 117 aa15.62■□□□□ 0.09
SMARCB1-205ENST00000417137 IBA57-AS1B1ANH7 110 aa15.62■□□□□ 0.09
SMARCB1-205ENST00000417137 TMEM262E9PQX1 116 aa15.62■□□□□ 0.09
SMARCB1-205ENST00000417137 IMMP2LQ96T52 175 aa15.62■□□□□ 0.09
SMARCB1-205ENST00000417137 CHCHD5Q9BSY4 110 aa15.62■□□□□ 0.09
SMARCB1-205ENST00000417137 A0A1B0GXF2 115 aa15.61■□□□□ 0.09
SMARCB1-205ENST00000417137 COTL1Q14019 142 aa15.61■□□□□ 0.09
SMARCB1-205ENST00000417137 NTM-AS1Q6ZSK4 140 aa15.61■□□□□ 0.09
SMARCB1-205ENST00000417137 ST20Q9HBF5 79 aa15.61■□□□□ 0.09
SMARCB1-205ENST00000417137 CARHSP1Q9Y2V2 147 aaKnown RBP15.61■□□□□ 0.09
SMARCB1-205ENST00000417137 TRBV6-5A0A0K0K1A5 114 aa15.6■□□□□ 0.09
SMARCB1-205ENST00000417137 ELOBQ15370 118 aa15.6■□□□□ 0.09
SMARCB1-205ENST00000417137 IQCJQ1A5X6 159 aa15.6■□□□□ 0.09
SMARCB1-205ENST00000417137 BTF3L4Q96K17 158 aa15.6■□□□□ 0.09
SMARCB1-205ENST00000417137 SDHAF1A6NFY7 115 aa15.59■□□□□ 0.09
SMARCB1-205ENST00000417137 LAGE3Q14657 143 aa15.59■□□□□ 0.09
SMARCB1-205ENST00000417137 PMCHP20382 165 aa15.57■□□□□ 0.08
SMARCB1-205ENST00000417137 NDUFA5Q16718 116 aa15.57■□□□□ 0.08
SMARCB1-205ENST00000417137 MRPL51Q4U2R6 128 aaKnown RBP15.57■□□□□ 0.08
SMARCB1-205ENST00000417137 TMEM243Q9BU79 118 aa15.57■□□□□ 0.08
SMARCB1-205ENST00000417137 TMEM242Q9NWH2 141 aa15.57■□□□□ 0.08
SMARCB1-205ENST00000417137 TRAV8-3A0A0A6YYJ7 113 aa15.56■□□□□ 0.08
SMARCB1-205ENST00000417137 I3L3M4 83 aa15.56■□□□□ 0.08
SMARCB1-205ENST00000417137 NCR2O95944 276 aa15.56■□□□□ 0.08
SMARCB1-205ENST00000417137 CKS2P33552 79 aa15.56■□□□□ 0.08
SMARCB1-205ENST00000417137 Q8N3U1 123 aa15.56■□□□□ 0.08
SMARCB1-205ENST00000417137 C7orf77A4D0Y5 90 aa15.55■□□□□ 0.08
SMARCB1-205ENST00000417137 GAS8-AS1O95177 125 aa15.55■□□□□ 0.08
SMARCB1-205ENST00000417137 S100PP25815 95 aa15.55■□□□□ 0.08
SMARCB1-205ENST00000417137 AMTP48728 403 aa15.55■□□□□ 0.08
SMARCB1-205ENST00000417137 RHEBQ15382 184 aa15.55■□□□□ 0.08
SMARCB1-205ENST00000417137 CLRN3Q8NCR9 226 aa15.55■□□□□ 0.08
SMARCB1-205ENST00000417137 SMKR1H3BMG3 65 aa15.54■□□□□ 0.08
SMARCB1-205ENST00000417137 RPS10P46783 165 aaKnown RBP15.54■□□□□ 0.08
SMARCB1-205ENST00000417137 TNP2Q05952 138 aa15.54■□□□□ 0.08
SMARCB1-205ENST00000417137 GAGE6Q13070 117 aa15.54■□□□□ 0.08
SMARCB1-205ENST00000417137 Q6ZRN7 208 aaPredicted RBP15.54■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 174 ms