RNA–Protein interactions for RNA: ENST00000416004.1

CHRNA1-206, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

TSL 2

Gene CHRNA1, Length 1,879 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-206ENST00000416004 RBMY1A1P0DJD3 496 aaKnown RBP6.73□□□□□ -1.33
CHRNA1-206ENST00000416004 RBMY1CP0DJD4 496 aa6.73□□□□□ -1.33
CHRNA1-206ENST00000416004 FOXA3P55318 350 aaPredicted RBP6.73□□□□□ -1.33
CHRNA1-206ENST00000416004 SMAGPQ0VAQ4 97 aa6.73□□□□□ -1.33
CHRNA1-206ENST00000416004 RBMY1FQ15415 496 aaKnown RBP6.73□□□□□ -1.33
CHRNA1-206ENST00000416004 TRPT1Q86TN4 253 aaKnown RBP6.73□□□□□ -1.33
CHRNA1-206ENST00000416004 KIR2DL5BQ8NHK3 375 aa6.73□□□□□ -1.33
CHRNA1-206ENST00000416004 TPPP3Q9BW30 176 aa6.73□□□□□ -1.33
CHRNA1-206ENST00000416004 KRTAP3-3Q9BYR6 98 aa6.73□□□□□ -1.33
CHRNA1-206ENST00000416004 KRTAP3-2Q9BYR7 98 aa6.73□□□□□ -1.33
CHRNA1-206ENST00000416004 H3BUT2 72 aa6.72□□□□□ -1.33
CHRNA1-206ENST00000416004 IGLC6P0CF74 106 aa6.72□□□□□ -1.33
CHRNA1-206ENST00000416004 CRYBA4P53673 196 aa6.72□□□□□ -1.33
CHRNA1-206ENST00000416004 ANXA2RQ3ZCQ2 193 aa6.72□□□□□ -1.33
CHRNA1-206ENST00000416004 URB1-AS1Q96HZ7 61 aa6.72□□□□□ -1.33
CHRNA1-206ENST00000416004 GTSF1LQ9H1H1 148 aa6.72□□□□□ -1.33
CHRNA1-206ENST00000416004 ARMS2P0C7Q2 107 aa6.71□□□□□ -1.34
CHRNA1-206ENST00000416004 CASC10Q5T4H9 136 aa6.71□□□□□ -1.34
CHRNA1-206ENST00000416004 LYZL1Q6UWQ5 148 aa6.71□□□□□ -1.34
CHRNA1-206ENST00000416004 STHQ8IWL8 128 aa6.71□□□□□ -1.34
CHRNA1-206ENST00000416004 OR11H2Q8NH07 326 aa6.71□□□□□ -1.34
CHRNA1-206ENST00000416004 TP53TG1Q9Y2A0 90 aa6.71□□□□□ -1.34
CHRNA1-206ENST00000416004 TRAV26-1A0A087WT03 109 aa6.7□□□□□ -1.34
CHRNA1-206ENST00000416004 F8W1H4 67 aa6.7□□□□□ -1.34
CHRNA1-206ENST00000416004 GNRH2O43555 120 aa6.7□□□□□ -1.34
CHRNA1-206ENST00000416004 SPRY2O43597 315 aa6.7□□□□□ -1.34
CHRNA1-206ENST00000416004 FGF6P10767 208 aa6.7□□□□□ -1.34
CHRNA1-206ENST00000416004 RPL35AP18077 110 aaKnown RBP6.7□□□□□ -1.34
CHRNA1-206ENST00000416004 HBBP68871 147 aa6.7□□□□□ -1.34
CHRNA1-206ENST00000416004 BOD1L2Q8IYS8 172 aa6.7□□□□□ -1.34
CHRNA1-206ENST00000416004 RETNQ9HD89 108 aa6.7□□□□□ -1.34
CHRNA1-206ENST00000416004 DNAH9Q9NYC9 4486 aa6.7□□□□□ -1.34
CHRNA1-206ENST00000416004 LOC100996750A0A140TA64 210 aa6.7□□□□□ -1.34
CHRNA1-206ENST00000416004 TEX48A0A1B0GUV7 120 aa6.7□□□□□ -1.34
CHRNA1-206ENST00000416004 TSPAN13O95857 204 aa6.7□□□□□ -1.34
CHRNA1-206ENST00000416004 GIG44P09565 113 aaPredicted RBP6.7□□□□□ -1.34
CHRNA1-206ENST00000416004 CAMPP49913 170 aa6.7□□□□□ -1.34
CHRNA1-206ENST00000416004 RPL24P83731 157 aaKnown RBP6.7□□□□□ -1.34
CHRNA1-206ENST00000416004 KRTAP4-6Q9BYQ5 205 aa6.7□□□□□ -1.34
CHRNA1-206ENST00000416004 EDA2RQ9HAV5 297 aa6.7□□□□□ -1.34
CHRNA1-206ENST00000416004 MRPL16Q9NX20 251 aaKnown RBP6.7□□□□□ -1.34
CHRNA1-206ENST00000416004 PRM2P04554 102 aa6.69□□□□□ -1.34
CHRNA1-206ENST00000416004 ZFAND6Q6FIF0 208 aa6.69□□□□□ -1.34
CHRNA1-206ENST00000416004 XCL2Q9UBD3 114 aa6.69□□□□□ -1.34
CHRNA1-206ENST00000416004 TP73-AS1Q9UF72 201 aa6.69□□□□□ -1.34
CHRNA1-206ENST00000416004 A0A1B0GUT8 65 aa6.68□□□□□ -1.34
CHRNA1-206ENST00000416004 H3BVH4 76 aa6.68□□□□□ -1.34
CHRNA1-206ENST00000416004 RNASE3P12724 160 aaKnown RBP6.68□□□□□ -1.34
CHRNA1-206ENST00000416004 DEFB135Q30KP9 77 aa6.68□□□□□ -1.34
CHRNA1-206ENST00000416004 FAM159AQ6UWV7 190 aa6.68□□□□□ -1.34
CHRNA1-206ENST00000416004 GEMIN7Q9H840 131 aaKnown RBP6.68□□□□□ -1.34
CHRNA1-206ENST00000416004 TIMM8BQ9Y5J9 83 aaPredicted RBP6.68□□□□□ -1.34
CHRNA1-206ENST00000416004 OVOL2Q9BRP0 275 aa6.68□□□□□ -1.34
CHRNA1-206ENST00000416004 CNFNQ9BYD5 112 aa6.68□□□□□ -1.34
CHRNA1-206ENST00000416004 SPANXB1Q9NS25 103 aaPredicted RBP6.68□□□□□ -1.34
CHRNA1-206ENST00000416004 MSRB1Q9NZV6 116 aa6.68□□□□□ -1.34
CHRNA1-206ENST00000416004 TENM3Q9P273 2699 aa6.67□□□□□ -1.34
CHRNA1-206ENST00000416004 IGHV1OR15-1A0A075B7D0 117 aa6.67□□□□□ -1.34
CHRNA1-206ENST00000416004 SNAI2O43623 268 aa6.67□□□□□ -1.34
CHRNA1-206ENST00000416004 SMIM13P0DJ93 91 aa6.67□□□□□ -1.34
CHRNA1-206ENST00000416004 ASIPP42127 132 aa6.67□□□□□ -1.34
CHRNA1-206ENST00000416004 RIGQ13278 110 aa6.67□□□□□ -1.34
CHRNA1-206ENST00000416004 MORN3Q6PF18 240 aaPredicted RBP6.67□□□□□ -1.34
CHRNA1-206ENST00000416004 C1orf158Q8N1D5 194 aa6.67□□□□□ -1.34
CHRNA1-206ENST00000416004 RNF183Q96D59 192 aa6.67□□□□□ -1.34
CHRNA1-206ENST00000416004 MDFICQ9P1T7 246 aa6.67□□□□□ -1.34
CHRNA1-206ENST00000416004 IGHV3-16A0A0C4DH30 117 aa6.66□□□□□ -1.34
CHRNA1-206ENST00000416004 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP6.66□□□□□ -1.34
CHRNA1-206ENST00000416004 INSP01308 110 aa6.66□□□□□ -1.34
CHRNA1-206ENST00000416004 HTN1P15515 57 aa6.66□□□□□ -1.34
CHRNA1-206ENST00000416004 LGALS9BQ3B8N2 356 aa6.66□□□□□ -1.34
CHRNA1-206ENST00000416004 LGALS9CQ6DKI2 356 aa6.66□□□□□ -1.34
CHRNA1-206ENST00000416004 HIGD1BQ9P298 99 aa6.66□□□□□ -1.34
CHRNA1-206ENST00000416004 S100A4P26447 101 aaKnown RBP6.66□□□□□ -1.34
CHRNA1-206ENST00000416004 TWIST1Q15672 202 aa6.66□□□□□ -1.34
CHRNA1-206ENST00000416004 LINC00173Q6ZV60 143 aa6.66□□□□□ -1.34
CHRNA1-206ENST00000416004 ZNF479Q96JC4 524 aa6.66□□□□□ -1.34
CHRNA1-206ENST00000416004 C1QTNF4Q9BXJ3 329 aa6.66□□□□□ -1.34
CHRNA1-206ENST00000416004 STAB2Q8WWQ8 2551 aa6.65□□□□□ -1.34
CHRNA1-206ENST00000416004 GATD1Q8NB37 220 aa6.65□□□□□ -1.34
CHRNA1-206ENST00000416004 CSNK1G2-AS1Q8NCQ2 148 aa6.65□□□□□ -1.34
CHRNA1-206ENST00000416004 PGPEP1Q9NXJ5 209 aa6.65□□□□□ -1.34
CHRNA1-206ENST00000416004 IGHV3OR16-12A0A075B7B8 117 aa6.64□□□□□ -1.35
CHRNA1-206ENST00000416004 A0A0J9YWU9 116 aa6.64□□□□□ -1.35
CHRNA1-206ENST00000416004 NUPR2A6NF83 97 aa6.64□□□□□ -1.35
CHRNA1-206ENST00000416004 M0R381 172 aa6.64□□□□□ -1.35
CHRNA1-206ENST00000416004 MED14OSP0DP75 135 aa6.64□□□□□ -1.35
CHRNA1-206ENST00000416004 ATP6V0E2Q8NHE4 81 aa6.64□□□□□ -1.35
CHRNA1-206ENST00000416004 C9orf85Q96MD7 179 aa6.64□□□□□ -1.35
CHRNA1-206ENST00000416004 LINC01587Q99440 93 aa6.64□□□□□ -1.35
CHRNA1-206ENST00000416004 AP5S1Q9NUS5 200 aa6.64□□□□□ -1.35
CHRNA1-206ENST00000416004 CYSLTR1Q9Y271 337 aa6.64□□□□□ -1.35
CHRNA1-206ENST00000416004 KLK5Q9Y337 293 aaPredicted RBP6.64□□□□□ -1.35
CHRNA1-206ENST00000416004 IGHV4-4A0A075B6R2 117 aa6.64□□□□□ -1.35
CHRNA1-206ENST00000416004 A0A1B0GW15 77 aa6.64□□□□□ -1.35
CHRNA1-206ENST00000416004 H0Y8G0 127 aa6.64□□□□□ -1.35
CHRNA1-206ENST00000416004 SPANXN1Q5VSR9 72 aa6.64□□□□□ -1.35
CHRNA1-206ENST00000416004 ZNF493Q6ZR52 646 aa6.64□□□□□ -1.35
CHRNA1-206ENST00000416004 LINC00467Q9BRT7 94 aa6.64□□□□□ -1.35
CHRNA1-206ENST00000416004 VCX2Q9H322 139 aa6.64□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 68.2 ms