RNA–Protein interactions for RNA: ENST00000414879.5

PTPRF-205, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 2

Gene PTPRF, Length 4,836 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-205ENST00000414879 SPINK8P0C7L1 97 aa9.03□□□□□ -0.96
PTPRF-205ENST00000414879 BVES-AS1Q5T3Y7 98 aa9.03□□□□□ -0.96
PTPRF-205ENST00000414879 KIR2DL5BA0A0G2JN68 375 aa9.02□□□□□ -0.96
PTPRF-205ENST00000414879 KIR2DL5BA0A0G2JPC4 375 aa9.02□□□□□ -0.96
PTPRF-205ENST00000414879 GATA1P15976 413 aaPredicted RBP9.02□□□□□ -0.96
PTPRF-205ENST00000414879 KIR2DL5AQ8N109 375 aa9.02□□□□□ -0.96
PTPRF-205ENST00000414879 C11orf86A6NJI1 115 aa9.02□□□□□ -0.97
PTPRF-205ENST00000414879 CDK2AP2O75956 126 aa9.02□□□□□ -0.97
PTPRF-205ENST00000414879 RPL32P62910 135 aaKnown RBP9.02□□□□□ -0.97
PTPRF-205ENST00000414879 DEFB135Q30KP9 77 aa9.02□□□□□ -0.97
PTPRF-205ENST00000414879 SIGMAR1Q99720 223 aa9.02□□□□□ -0.97
PTPRF-205ENST00000414879 CSPG4Q6UVK1 2322 aa9.02□□□□□ -0.97
PTPRF-205ENST00000414879 F8W1H4 67 aa9.02□□□□□ -0.97
PTPRF-205ENST00000414879 LINC01006Q8NI28 216 aa9.02□□□□□ -0.97
PTPRF-205ENST00000414879 SNHG12Q9BXW3 62 aa9.02□□□□□ -0.97
PTPRF-205ENST00000414879 CHD7Q9P2D1 2997 aa9.02□□□□□ -0.97
PTPRF-205ENST00000414879 XCL1P47992 114 aa9.02□□□□□ -0.97
PTPRF-205ENST00000414879 SOCS3O14543 225 aa9.01□□□□□ -0.97
PTPRF-205ENST00000414879 KIR2DL5BQ8NHK3 375 aa9.01□□□□□ -0.97
PTPRF-205ENST00000414879 CITED1Q99966 193 aa9.01□□□□□ -0.97
PTPRF-205ENST00000414879 CPAMD8Q8IZJ3 1885 aa9.01□□□□□ -0.97
PTPRF-205ENST00000414879 TRAV8-3A0A0A6YYJ7 113 aa9.01□□□□□ -0.97
PTPRF-205ENST00000414879 AMTNQ6UX39 209 aa9.01□□□□□ -0.97
PTPRF-205ENST00000414879 Q9H8V8 135 aa9.01□□□□□ -0.97
PTPRF-205ENST00000414879 CDSNQ15517 529 aa9.01□□□□□ -0.97
PTPRF-205ENST00000414879 TLN1Q9Y490 2541 aaKnown RBP9.01□□□□□ -0.97
PTPRF-205ENST00000414879 MRAPQ8TCY5 172 aa9.01□□□□□ -0.97
PTPRF-205ENST00000414879 C9JAW5 83 aa9□□□□□ -0.97
PTPRF-205ENST00000414879 SPATA25Q9BR10 227 aa9□□□□□ -0.97
PTPRF-205ENST00000414879 MDFICQ9P1T7 246 aa9□□□□□ -0.97
PTPRF-205ENST00000414879 A0A096LPF7 62 aa9□□□□□ -0.97
PTPRF-205ENST00000414879 E9PLD3 99 aa9□□□□□ -0.97
PTPRF-205ENST00000414879 H0YGX0 51 aa9□□□□□ -0.97
PTPRF-205ENST00000414879 PRR14LQ5THK1 2151 aa9□□□□□ -0.97
PTPRF-205ENST00000414879 NPSP0C0P6 89 aa9□□□□□ -0.97
PTPRF-205ENST00000414879 COX7B2Q8TF08 81 aa9□□□□□ -0.97
PTPRF-205ENST00000414879 DEFB125Q8N687 156 aa8.99□□□□□ -0.97
PTPRF-205ENST00000414879 ZFAND2AQ8N6M9 145 aa8.99□□□□□ -0.97
PTPRF-205ENST00000414879 PTPN13Q12923 2485 aa8.99□□□□□ -0.97
PTPRF-205ENST00000414879 NDUFA1O15239 70 aa8.99□□□□□ -0.97
PTPRF-205ENST00000414879 ZNF80P51504 273 aaPredicted RBP8.99□□□□□ -0.97
PTPRF-205ENST00000414879 C14orf177Q52M58 125 aa8.99□□□□□ -0.97
PTPRF-205ENST00000414879 CAMK2N2Q96S95 79 aa8.99□□□□□ -0.97
PTPRF-205ENST00000414879 TNCP24821 2201 aa8.99□□□□□ -0.97
PTPRF-205ENST00000414879 Q6ZQT7 251 aa8.98□□□□□ -0.97
PTPRF-205ENST00000414879 VSIG2Q96IQ7 327 aa8.98□□□□□ -0.97
PTPRF-205ENST00000414879 A0A0J9YXV3 536 aa8.98□□□□□ -0.97
PTPRF-205ENST00000414879 BAALCQ8WXS3 180 aa8.98□□□□□ -0.97
PTPRF-205ENST00000414879 PCP4P48539 62 aa8.98□□□□□ -0.97
PTPRF-205ENST00000414879 TRBV6-4A0A1B0GX49 114 aa8.98□□□□□ -0.97
PTPRF-205ENST00000414879 NXPH4O95158 308 aa8.98□□□□□ -0.97
PTPRF-205ENST00000414879 CFC1BP0CG36 223 aa8.98□□□□□ -0.97
PTPRF-205ENST00000414879 CFC1P0CG37 223 aa8.98□□□□□ -0.97
PTPRF-205ENST00000414879 SCRT2Q9NQ03 307 aa8.98□□□□□ -0.97
PTPRF-205ENST00000414879 GAGE2BQ13066 116 aa8.97□□□□□ -0.97
PTPRF-205ENST00000414879 GAGE2EQ4V326 116 aa8.97□□□□□ -0.97
PTPRF-205ENST00000414879 GAGE2DQ9UEU5 116 aa8.97□□□□□ -0.97
PTPRF-205ENST00000414879 F8W735 103 aaPredicted RBP8.97□□□□□ -0.97
PTPRF-205ENST00000414879 MRGPRG-AS1Q2M3A8 158 aa8.97□□□□□ -0.97
PTPRF-205ENST00000414879 C11orf45Q8TAV5 145 aa8.97□□□□□ -0.97
PTPRF-205ENST00000414879 PPDPFLQ8WWR9 84 aa8.97□□□□□ -0.97
PTPRF-205ENST00000414879 C16orf95Q9H693 158 aa8.97□□□□□ -0.97
PTPRF-205ENST00000414879 K7EP34 96 aa8.97□□□□□ -0.97
PTPRF-205ENST00000414879 C12orf74Q32Q52 190 aa8.97□□□□□ -0.97
PTPRF-205ENST00000414879 TDRG1Q3Y452 100 aa8.97□□□□□ -0.97
PTPRF-205ENST00000414879 TMEM126AQ9H061 195 aa8.97□□□□□ -0.97
PTPRF-205ENST00000414879 TRBV6-5A0A0K0K1A5 114 aa8.96□□□□□ -0.97
PTPRF-205ENST00000414879 A0A1W2PPM0 123 aa8.96□□□□□ -0.97
PTPRF-205ENST00000414879 C5orf38Q86SI9 138 aa8.96□□□□□ -0.98
PTPRF-205ENST00000414879 KLLNB2CW77 178 aa8.96□□□□□ -0.98
PTPRF-205ENST00000414879 RS1O15537 224 aa8.96□□□□□ -0.98
PTPRF-205ENST00000414879 C20orf173Q96LM9 149 aa8.96□□□□□ -0.98
PTPRF-205ENST00000414879 IGHV4-4A0A075B6R2 117 aa8.95□□□□□ -0.98
PTPRF-205ENST00000414879 IGHV1-58A0A0C4DH39 117 aa8.95□□□□□ -0.98
PTPRF-205ENST00000414879 TINCRA0A1B0GVN0 87 aa8.95□□□□□ -0.98
PTPRF-205ENST00000414879 RNASE13Q5GAN3 156 aaKnown RBP8.95□□□□□ -0.98
PTPRF-205ENST00000414879 ODF1Q14990 250 aa8.94□□□□□ -0.98
PTPRF-205ENST00000414879 NAA38Q9BRA0 125 aaKnown RBP8.94□□□□□ -0.98
PTPRF-205ENST00000414879 GTSF1LQ9H1H1 148 aa8.94□□□□□ -0.98
PTPRF-205ENST00000414879 EDA2RQ9HAV5 297 aa8.94□□□□□ -0.98
PTPRF-205ENST00000414879 U3KQK5 164 aa8.94□□□□□ -0.98
PTPRF-205ENST00000414879 LINC00322Q6ZN03 302 aaPredicted RBP8.94□□□□□ -0.98
PTPRF-205ENST00000414879 ZFAND6Q6FIF0 208 aa8.94□□□□□ -0.98
PTPRF-205ENST00000414879 CLPSL2Q6UWE3 100 aa8.94□□□□□ -0.98
PTPRF-205ENST00000414879 LURAP1LQ8IV03 231 aa8.93□□□□□ -0.98
PTPRF-205ENST00000414879 UBL5Q9BZL1 73 aa8.93□□□□□ -0.98
PTPRF-205ENST00000414879 IGLV2-11P01706 119 aa8.93□□□□□ -0.98
PTPRF-205ENST00000414879 DEFB1P60022 68 aa8.93□□□□□ -0.98
PTPRF-205ENST00000414879 RPL39P62891 51 aaKnown RBP8.92□□□□□ -0.98
PTPRF-205ENST00000414879 FAM222AQ5U5X8 452 aa8.92□□□□□ -0.98
PTPRF-205ENST00000414879 Q9HAA7 133 aa8.92□□□□□ -0.98
PTPRF-205ENST00000414879 SND1-IT1Q9HBX3 110 aa8.92□□□□□ -0.98
PTPRF-205ENST00000414879 Q6ZTI0 123 aa8.92□□□□□ -0.98
PTPRF-205ENST00000414879 PYGO1Q9Y3Y4 419 aa8.92□□□□□ -0.98
PTPRF-205ENST00000414879 COL27A1Q8IZC6 1860 aaPredicted RBP8.92□□□□□ -0.98
PTPRF-205ENST00000414879 UBE2BP63146 152 aa8.92□□□□□ -0.98
PTPRF-205ENST00000414879 DSCR8Q96T75 97 aa8.92□□□□□ -0.98
PTPRF-205ENST00000414879 PCP2Q8IVA1 136 aa8.92□□□□□ -0.98
PTPRF-205ENST00000414879 C15orf53Q8NAA6 179 aa8.92□□□□□ -0.98
PTPRF-205ENST00000414879 DCANP1Q8TF63 244 aa8.92□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 116 ms