RNA–Protein interactions for RNA: ENST00000414781.1

RAPGEF1-204, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

TSL 5

Gene RAPGEF1, Length 957 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-204ENST00000414781 GAGE12IP0CL82 117 aa9.4□□□□□ -0.9
RAPGEF1-204ENST00000414781 DEFB130BP0DP73 79 aa9.4□□□□□ -0.9
RAPGEF1-204ENST00000414781 DEFB130AP0DP74 79 aa9.4□□□□□ -0.9
RAPGEF1-204ENST00000414781 CAMPP49913 170 aa9.4□□□□□ -0.9
RAPGEF1-204ENST00000414781 DAD1P61803 113 aa9.4□□□□□ -0.9
RAPGEF1-204ENST00000414781 TTC32Q5I0X7 151 aa9.4□□□□□ -0.9
RAPGEF1-204ENST00000414781 MRPL54Q6P161 138 aaKnown RBP9.4□□□□□ -0.9
RAPGEF1-204ENST00000414781 Q6ZTI0 123 aa9.4□□□□□ -0.9
RAPGEF1-204ENST00000414781 CBLN2Q8IUK8 224 aa9.4□□□□□ -0.9
RAPGEF1-204ENST00000414781 LINC00612Q8N6U2 182 aa9.4□□□□□ -0.9
RAPGEF1-204ENST00000414781 OR4C5Q8NGB2 326 aa9.4□□□□□ -0.9
RAPGEF1-204ENST00000414781 PGPEP1Q9NXJ5 209 aa9.4□□□□□ -0.9
RAPGEF1-204ENST00000414781 PLA2G2DQ9UNK4 145 aa9.4□□□□□ -0.9
RAPGEF1-204ENST00000414781 HTN3P15516 51 aa9.39□□□□□ -0.91
RAPGEF1-204ENST00000414781 CDPF1Q6NVV7 123 aa9.39□□□□□ -0.91
RAPGEF1-204ENST00000414781 ZFP2Q6ZN57 461 aa9.39□□□□□ -0.91
RAPGEF1-204ENST00000414781 TMEM191AQ9H0A3 160 aa9.39□□□□□ -0.91
RAPGEF1-204ENST00000414781 TRAV4A0A0B4J268 109 aa9.38□□□□□ -0.91
RAPGEF1-204ENST00000414781 A0A1B0GXF2 115 aa9.38□□□□□ -0.91
RAPGEF1-204ENST00000414781 RS1O15537 224 aa9.38□□□□□ -0.91
RAPGEF1-204ENST00000414781 MT-ND6P03923 174 aa9.38□□□□□ -0.91
RAPGEF1-204ENST00000414781 RAB4BP61018 213 aa9.38□□□□□ -0.91
RAPGEF1-204ENST00000414781 C14orf178Q8N769 122 aaPredicted RBP9.38□□□□□ -0.91
RAPGEF1-204ENST00000414781 GNB1LQ9BYB4 327 aa9.38□□□□□ -0.91
RAPGEF1-204ENST00000414781 DPH3P1Q9H4G8 78 aa9.38□□□□□ -0.91
RAPGEF1-204ENST00000414781 MSRB1Q9NZV6 116 aa9.38□□□□□ -0.91
RAPGEF1-204ENST00000414781 TGIF2-C20orf24A0A0A6YYL0 155 aa9.37□□□□□ -0.91
RAPGEF1-204ENST00000414781 EVI2AP22794 236 aa9.37□□□□□ -0.91
RAPGEF1-204ENST00000414781 CCL18P55774 89 aa9.37□□□□□ -0.91
RAPGEF1-204ENST00000414781 SLAQ13239 276 aa9.37□□□□□ -0.91
RAPGEF1-204ENST00000414781 CFAP126Q5VTH2 177 aa9.37□□□□□ -0.91
RAPGEF1-204ENST00000414781 GATD1Q8NB37 220 aa9.37□□□□□ -0.91
RAPGEF1-204ENST00000414781 SCO1O75880 301 aa9.36□□□□□ -0.91
RAPGEF1-204ENST00000414781 HLA-DQA1P01909 254 aa9.36□□□□□ -0.91
RAPGEF1-204ENST00000414781 ATP5G1P05496 136 aa9.36□□□□□ -0.91
RAPGEF1-204ENST00000414781 YPEL4Q96NS1 127 aa9.36□□□□□ -0.91
RAPGEF1-204ENST00000414781 F5H697 171 aa9.35□□□□□ -0.91
RAPGEF1-204ENST00000414781 CRYGDP07320 174 aa9.35□□□□□ -0.91
RAPGEF1-204ENST00000414781 FAM74A4Q5TZK3 123 aa9.35□□□□□ -0.91
RAPGEF1-204ENST00000414781 A0A087WWL8 130 aa9.34□□□□□ -0.91
RAPGEF1-204ENST00000414781 TRGV4A0A0C4DH28 118 aa9.34□□□□□ -0.91
RAPGEF1-204ENST00000414781 COLCA2A8K830 154 aa9.34□□□□□ -0.91
RAPGEF1-204ENST00000414781 H7C1H1 209 aa9.34□□□□□ -0.91
RAPGEF1-204ENST00000414781 EREGO14944 169 aa9.34□□□□□ -0.91
RAPGEF1-204ENST00000414781 PPP1R17O96001 155 aa9.34□□□□□ -0.91
RAPGEF1-204ENST00000414781 SMR3BP02814 79 aaPredicted RBP9.34□□□□□ -0.91
RAPGEF1-204ENST00000414781 FAM104BQ5XKR9 115 aa9.34□□□□□ -0.91
RAPGEF1-204ENST00000414781 JPT2Q9H910 190 aa9.34□□□□□ -0.91
RAPGEF1-204ENST00000414781 KIF25-AS1Q9Y6Z4 181 aa9.34□□□□□ -0.91
RAPGEF1-204ENST00000414781 APCSP02743 223 aa9.33□□□□□ -0.92
RAPGEF1-204ENST00000414781 PPBPP02775 128 aa9.33□□□□□ -0.92
RAPGEF1-204ENST00000414781 MGPP08493 103 aa9.33□□□□□ -0.92
RAPGEF1-204ENST00000414781 RAB4AP20338 218 aa9.33□□□□□ -0.92
RAPGEF1-204ENST00000414781 RAB5AP20339 215 aa9.33□□□□□ -0.92
RAPGEF1-204ENST00000414781 ZNF56Q15929 161 aa9.33□□□□□ -0.92
RAPGEF1-204ENST00000414781 TMEM136Q6ZRR5 245 aa9.33□□□□□ -0.92
RAPGEF1-204ENST00000414781 MRAP2Q96G30 205 aa9.33□□□□□ -0.92
RAPGEF1-204ENST00000414781 ZNF479Q96JC4 524 aa9.33□□□□□ -0.92
RAPGEF1-204ENST00000414781 SAMD10Q9BYL1 202 aa9.33□□□□□ -0.92
RAPGEF1-204ENST00000414781 TRAPPC1Q9Y5R8 145 aa9.33□□□□□ -0.92
RAPGEF1-204ENST00000414781 IGHV3-53P01767 116 aa9.32□□□□□ -0.92
RAPGEF1-204ENST00000414781 RPS10P46783 165 aaKnown RBP9.32□□□□□ -0.92
RAPGEF1-204ENST00000414781 UFSP1Q6NVU6 142 aa9.32□□□□□ -0.92
RAPGEF1-204ENST00000414781 AMN1Q8IY45 258 aa9.32□□□□□ -0.92
RAPGEF1-204ENST00000414781 HHLA3Q9XRX5 114 aa9.32□□□□□ -0.92
RAPGEF1-204ENST00000414781 TRBV6-4A0A1B0GX49 114 aa9.31□□□□□ -0.92
RAPGEF1-204ENST00000414781 CKS2P33552 79 aa9.31□□□□□ -0.92
RAPGEF1-204ENST00000414781 LINC00315P59091 139 aa9.31□□□□□ -0.92
RAPGEF1-204ENST00000414781 FABP9Q0Z7S8 132 aa9.31□□□□□ -0.92
RAPGEF1-204ENST00000414781 FHL2Q14192 279 aa9.31□□□□□ -0.92
RAPGEF1-204ENST00000414781 PRADC1Q9BSG0 188 aa9.31□□□□□ -0.92
RAPGEF1-204ENST00000414781 Q9H8V8 135 aa9.31□□□□□ -0.92
RAPGEF1-204ENST00000414781 PRO0255Q9UI72 69 aa9.31□□□□□ -0.92
RAPGEF1-204ENST00000414781 LINC00588Q9Y4M8 146 aa9.31□□□□□ -0.92
RAPGEF1-204ENST00000414781 RNF213Q63HN8 5207 aa9.3□□□□□ -0.92
RAPGEF1-204ENST00000414781 IGHV3-73A0A0B4J1V6 119 aa9.3□□□□□ -0.92
RAPGEF1-204ENST00000414781 TRBV10-1A0A0K0K1A3 114 aa9.3□□□□□ -0.92
RAPGEF1-204ENST00000414781 F5H768 121 aa9.3□□□□□ -0.92
RAPGEF1-204ENST00000414781 GATA1P15976 413 aaPredicted RBP9.3□□□□□ -0.92
RAPGEF1-204ENST00000414781 ORMDL3Q8N138 153 aa9.3□□□□□ -0.92
RAPGEF1-204ENST00000414781 RNF185Q96GF1 192 aa9.3□□□□□ -0.92
RAPGEF1-204ENST00000414781 MRPL18Q9H0U6 180 aaKnown RBP9.3□□□□□ -0.92
RAPGEF1-204ENST00000414781 NUDT3O95989 172 aa9.29□□□□□ -0.92
RAPGEF1-204ENST00000414781 RHOHQ15669 191 aa9.29□□□□□ -0.92
RAPGEF1-204ENST00000414781 MRPL51Q4U2R6 128 aaKnown RBP9.29□□□□□ -0.92
RAPGEF1-204ENST00000414781 DNAJC30Q96LL9 226 aa9.29□□□□□ -0.92
RAPGEF1-204ENST00000414781 KRTAP1-5Q9BYS1 174 aa9.29□□□□□ -0.92
RAPGEF1-204ENST00000414781 LAMTOR2Q9Y2Q5 125 aa9.29□□□□□ -0.92
RAPGEF1-204ENST00000414781 M0QY20 66 aa9.28□□□□□ -0.92
RAPGEF1-204ENST00000414781 PHOX2AO14813 284 aa9.28□□□□□ -0.92
RAPGEF1-204ENST00000414781 KRTAP10-1P60331 282 aa9.28□□□□□ -0.92
RAPGEF1-204ENST00000414781 SUMO4Q6EEV6 95 aa9.28□□□□□ -0.92
RAPGEF1-204ENST00000414781 SREK1IP1Q8N9Q2 155 aaPredicted RBP9.28□□□□□ -0.92
RAPGEF1-204ENST00000414781 NIT2Q9NQR4 276 aa9.28□□□□□ -0.92
RAPGEF1-204ENST00000414781 H3BNG1 76 aa9.27□□□□□ -0.93
RAPGEF1-204ENST00000414781 K7EQD1 137 aa9.27□□□□□ -0.93
RAPGEF1-204ENST00000414781 PAX4O43316 350 aa9.27□□□□□ -0.93
RAPGEF1-204ENST00000414781 CRYBA4P53673 196 aa9.27□□□□□ -0.93
RAPGEF1-204ENST00000414781 SLC25A29Q8N8R3 303 aa9.27□□□□□ -0.93
RAPGEF1-204ENST00000414781 TNFRSF18Q9Y5U5 241 aa9.27□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 186.4 ms