RNA–Protein interactions for RNA: ENST00000414700.7

SHMT2-202, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 1 (best) BASIC

Gene SHMT2, Length 2,006 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-202ENST00000414700 CKS1BP61024 79 aa11.38□□□□□ -0.59
SHMT2-202ENST00000414700 PHLDA1Q8WV24 401 aaPredicted RBP11.38□□□□□ -0.59
SHMT2-202ENST00000414700 LOC389332A0A1B0GUA5 103 aa11.38□□□□□ -0.59
SHMT2-202ENST00000414700 KLLNB2CW77 178 aa11.38□□□□□ -0.59
SHMT2-202ENST00000414700 SH2D1AO60880 128 aa11.38□□□□□ -0.59
SHMT2-202ENST00000414700 RNASE4P34096 147 aaKnown RBP11.38□□□□□ -0.59
SHMT2-202ENST00000414700 CMC4P56277 68 aaPredicted RBP11.38□□□□□ -0.59
SHMT2-202ENST00000414700 PRELID3AQ96N28 172 aa11.38□□□□□ -0.59
SHMT2-202ENST00000414700 D6R8Y8 96 aa11.37□□□□□ -0.59
SHMT2-202ENST00000414700 RPL35AP18077 110 aaKnown RBP11.37□□□□□ -0.59
SHMT2-202ENST00000414700 ODF3Q96PU9 254 aa11.37□□□□□ -0.59
SHMT2-202ENST00000414700 CHAC1Q9BUX1 264 aa11.37□□□□□ -0.59
SHMT2-202ENST00000414700 C11orf21Q9P2W6 132 aa11.37□□□□□ -0.59
SHMT2-202ENST00000414700 C18orf15Q96N68 181 aa11.36□□□□□ -0.59
SHMT2-202ENST00000414700 TRBV7-9A0A0J9YWB2 115 aa11.36□□□□□ -0.59
SHMT2-202ENST00000414700 E9PLD3 99 aa11.36□□□□□ -0.59
SHMT2-202ENST00000414700 K7ERJ3 54 aa11.36□□□□□ -0.59
SHMT2-202ENST00000414700 ORMDL3Q8N138 153 aa11.36□□□□□ -0.59
SHMT2-202ENST00000414700 MRAP2Q96G30 205 aa11.36□□□□□ -0.59
SHMT2-202ENST00000414700 TRAV12-3A0A0B4J271 114 aa11.35□□□□□ -0.59
SHMT2-202ENST00000414700 RBMY1A1P0DJD3 496 aaKnown RBP11.35□□□□□ -0.59
SHMT2-202ENST00000414700 RBMY1CP0DJD4 496 aa11.35□□□□□ -0.59
SHMT2-202ENST00000414700 WFDC2Q14508 124 aa11.35□□□□□ -0.59
SHMT2-202ENST00000414700 RBMY1FQ15415 496 aaKnown RBP11.35□□□□□ -0.59
SHMT2-202ENST00000414700 KRTAP21-3Q3LHN1 58 aa11.35□□□□□ -0.59
SHMT2-202ENST00000414700 FAM104BQ5XKR9 115 aa11.35□□□□□ -0.59
SHMT2-202ENST00000414700 ZNF575Q86XF7 245 aa11.35□□□□□ -0.59
SHMT2-202ENST00000414700 TM2D2Q9BX73 214 aa11.35□□□□□ -0.59
SHMT2-202ENST00000414700 DKK2Q9UBU2 259 aa11.35□□□□□ -0.59
SHMT2-202ENST00000414700 FABP5P3A8MUU1 101 aa11.34□□□□□ -0.59
SHMT2-202ENST00000414700 GIG44P09565 113 aaPredicted RBP11.34□□□□□ -0.59
SHMT2-202ENST00000414700 LEPP41159 167 aa11.34□□□□□ -0.59
SHMT2-202ENST00000414700 XCL2Q9UBD3 114 aa11.34□□□□□ -0.59
SHMT2-202ENST00000414700 TMSB15BA0A087X1C1 80 aa11.33□□□□□ -0.6
SHMT2-202ENST00000414700 CEND1Q8N111 149 aa11.33□□□□□ -0.6
SHMT2-202ENST00000414700 NHP2Q9NX24 153 aaKnown RBP11.33□□□□□ -0.6
SHMT2-202ENST00000414700 IGKV3D-20A0A0C4DH25 116 aa11.33□□□□□ -0.6
SHMT2-202ENST00000414700 IGLL5B9A064 214 aa11.33□□□□□ -0.6
SHMT2-202ENST00000414700 PRB2P02812 416 aaPredicted RBP11.33□□□□□ -0.6
SHMT2-202ENST00000414700 TPPP3Q9BW30 176 aa11.33□□□□□ -0.6
SHMT2-202ENST00000414700 ZMAT4Q9H898 229 aa11.33□□□□□ -0.6
SHMT2-202ENST00000414700 TRAV26-1A0A087WT03 109 aa11.32□□□□□ -0.6
SHMT2-202ENST00000414700 ORM1P02763 201 aa11.32□□□□□ -0.6
SHMT2-202ENST00000414700 AMN1Q8IY45 258 aa11.32□□□□□ -0.6
SHMT2-202ENST00000414700 MTURNQ8N3F0 131 aa11.32□□□□□ -0.6
SHMT2-202ENST00000414700 ZNF479Q96JC4 524 aa11.32□□□□□ -0.6
SHMT2-202ENST00000414700 IGKV2D-26A0A0A0MRZ7 120 aa11.31□□□□□ -0.6
SHMT2-202ENST00000414700 TRAV21A0A0B4J279 112 aa11.31□□□□□ -0.6
SHMT2-202ENST00000414700 PRM2P04554 102 aa11.31□□□□□ -0.6
SHMT2-202ENST00000414700 IGHV4-30-4P0DP06 118 aa11.31□□□□□ -0.6
SHMT2-202ENST00000414700 MRPL51Q4U2R6 128 aaKnown RBP11.31□□□□□ -0.6
SHMT2-202ENST00000414700 CRYBA4P53673 196 aa11.31□□□□□ -0.6
SHMT2-202ENST00000414700 TRBV25-1A0A075B6N4 114 aa11.3□□□□□ -0.6
SHMT2-202ENST00000414700 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP11.3□□□□□ -0.6
SHMT2-202ENST00000414700 ODF1Q14990 250 aa11.3□□□□□ -0.6
SHMT2-202ENST00000414700 ETDBQ3ZM63 59 aa11.3□□□□□ -0.6
SHMT2-202ENST00000414700 LYZL1Q6UWQ5 148 aa11.3□□□□□ -0.6
SHMT2-202ENST00000414700 EVI2AP22794 236 aa11.3□□□□□ -0.6
SHMT2-202ENST00000414700 TAL2Q16559 108 aa11.3□□□□□ -0.6
SHMT2-202ENST00000414700 ANXA2RQ3ZCQ2 193 aa11.3□□□□□ -0.6
SHMT2-202ENST00000414700 LINC01559Q495D7 138 aa11.3□□□□□ -0.6
SHMT2-202ENST00000414700 GAGE13Q4V321 117 aa11.3□□□□□ -0.6
SHMT2-202ENST00000414700 SH2D6Q7Z4S9 175 aa11.3□□□□□ -0.6
SHMT2-202ENST00000414700 MRPL16Q9NX20 251 aaKnown RBP11.3□□□□□ -0.6
SHMT2-202ENST00000414700 HHLA3Q9XRX5 114 aa11.3□□□□□ -0.6
SHMT2-202ENST00000414700 NPYP01303 97 aa11.29□□□□□ -0.6
SHMT2-202ENST00000414700 GEMIN7Q9H840 131 aaKnown RBP11.29□□□□□ -0.6
SHMT2-202ENST00000414700 PRO0461Q9UI25 63 aa11.29□□□□□ -0.6
SHMT2-202ENST00000414700 LINC01546A6NGU7 62 aa11.28□□□□□ -0.6
SHMT2-202ENST00000414700 H3BMG7 143 aa11.28□□□□□ -0.6
SHMT2-202ENST00000414700 IGKCP01834 107 aa11.28□□□□□ -0.6
SHMT2-202ENST00000414700 CKS2P33552 79 aa11.28□□□□□ -0.6
SHMT2-202ENST00000414700 GNRH2O43555 120 aa11.28□□□□□ -0.6
SHMT2-202ENST00000414700 HTN1P15515 57 aa11.28□□□□□ -0.6
SHMT2-202ENST00000414700 C1orf158Q8N1D5 194 aa11.28□□□□□ -0.6
SHMT2-202ENST00000414700 TTTY13Q9BZ97 58 aa11.28□□□□□ -0.6
SHMT2-202ENST00000414700 IGHV3OR16-12A0A075B7B8 117 aa11.27□□□□□ -0.61
SHMT2-202ENST00000414700 INSP01308 110 aa11.27□□□□□ -0.61
SHMT2-202ENST00000414700 C12orf74Q32Q52 190 aa11.27□□□□□ -0.61
SHMT2-202ENST00000414700 CSNK1G2-AS1Q8NCQ2 148 aa11.27□□□□□ -0.61
SHMT2-202ENST00000414700 MUC4Q99102 2169 aa11.26□□□□□ -0.61
SHMT2-202ENST00000414700 SPRY2O43597 315 aa11.26□□□□□ -0.61
SHMT2-202ENST00000414700 DPM2O94777 84 aa11.26□□□□□ -0.61
SHMT2-202ENST00000414700 RRN3P1Q2M238 152 aa11.26□□□□□ -0.61
SHMT2-202ENST00000414700 FAM159AQ6UWV7 190 aa11.26□□□□□ -0.61
SHMT2-202ENST00000414700 MAP1LC3AQ9H492 121 aa11.26□□□□□ -0.61
SHMT2-202ENST00000414700 SMKR1H3BMG3 65 aa11.26□□□□□ -0.61
SHMT2-202ENST00000414700 FCER1GP30273 86 aa11.26□□□□□ -0.61
SHMT2-202ENST00000414700 KPRPQ5T749 579 aaPredicted RBP11.26□□□□□ -0.61
SHMT2-202ENST00000414700 MORN3Q6PF18 240 aaPredicted RBP11.26□□□□□ -0.61
SHMT2-202ENST00000414700 ATP6V0E2Q8NHE4 81 aa11.26□□□□□ -0.61
SHMT2-202ENST00000414700 ATP5LO75964 103 aa11.25□□□□□ -0.61
SHMT2-202ENST00000414700 IGHV1OR15-1A0A075B7D0 117 aa11.25□□□□□ -0.61
SHMT2-202ENST00000414700 TWIST1Q15672 202 aa11.25□□□□□ -0.61
SHMT2-202ENST00000414700 LINC01587Q99440 93 aa11.25□□□□□ -0.61
SHMT2-202ENST00000414700 APOMO95445 188 aa11.24□□□□□ -0.61
SHMT2-202ENST00000414700 PRSS1P07477 247 aa11.24□□□□□ -0.61
SHMT2-202ENST00000414700 MDFICQ9P1T7 246 aa11.24□□□□□ -0.61
SHMT2-202ENST00000414700 CYSLTR1Q9Y271 337 aa11.24□□□□□ -0.61
SHMT2-202ENST00000414700 TENM3Q9P273 2699 aa11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms