RNA–Protein interactions for RNA: ENST00000414419.6

RFFL-204, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 4

Gene RFFL, Length 559 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-204ENST00000414419 RPP21Q9H633 154 aaKnown RBP7.52□□□□□ -1.21
RFFL-204ENST00000414419 DAZ3Q9NR90 486 aaKnown RBP7.52□□□□□ -1.21
RFFL-204ENST00000414419 DYNC1H1Q14204 4646 aaKnown RBP7.51□□□□□ -1.21
RFFL-204ENST00000414419 K7EN84 100 aa7.51□□□□□ -1.21
RFFL-204ENST00000414419 TMEM97Q5BJF2 176 aa7.51□□□□□ -1.21
RFFL-204ENST00000414419 NIT1Q86X76 327 aa7.51□□□□□ -1.21
RFFL-204ENST00000414419 Q8N3U1 123 aa7.51□□□□□ -1.21
RFFL-204ENST00000414419 RMI2Q96E14 147 aa7.51□□□□□ -1.21
RFFL-204ENST00000414419 CHCHD7Q9BUK0 85 aa7.51□□□□□ -1.21
RFFL-204ENST00000414419 COX11Q9Y6N1 276 aa7.51□□□□□ -1.21
RFFL-204ENST00000414419 KIF25-AS1Q9Y6Z4 181 aa7.51□□□□□ -1.21
RFFL-204ENST00000414419 KIAA1109Q2LD37 5005 aa7.51□□□□□ -1.21
RFFL-204ENST00000414419 TRBV6-8A0A0A6YYG3 113 aa7.5□□□□□ -1.21
RFFL-204ENST00000414419 GATCO43716 136 aaKnown RBP7.5□□□□□ -1.21
RFFL-204ENST00000414419 FUSP35637 526 aaKnown RBP eCLIP7.5□□□□□ -1.21
RFFL-204ENST00000414419 TWIST1Q15672 202 aa7.5□□□□□ -1.21
RFFL-204ENST00000414419 WDR73Q6P4I2 378 aa7.5□□□□□ -1.21
RFFL-204ENST00000414419 DNAJC30Q96LL9 226 aa7.5□□□□□ -1.21
RFFL-204ENST00000414419 DPH3P1Q9H4G8 78 aa7.5□□□□□ -1.21
RFFL-204ENST00000414419 KLK12Q9UKR0 248 aa7.5□□□□□ -1.21
RFFL-204ENST00000414419 PKIAP61925 76 aa7.49□□□□□ -1.21
RFFL-204ENST00000414419 SUMO4Q6EEV6 95 aa7.49□□□□□ -1.21
RFFL-204ENST00000414419 SMIM15Q7Z3B0 74 aa7.49□□□□□ -1.21
RFFL-204ENST00000414419 SMIM7Q9BQ49 75 aa7.49□□□□□ -1.21
RFFL-204ENST00000414419 CHCHD5Q9BSY4 110 aa7.49□□□□□ -1.21
RFFL-204ENST00000414419 TRBV25-1A0A075B6N4 114 aa7.48□□□□□ -1.21
RFFL-204ENST00000414419 IGLV5-52A0A0A0MRZ9 124 aa7.48□□□□□ -1.21
RFFL-204ENST00000414419 LRCOL1A6NCL2 159 aa7.48□□□□□ -1.21
RFFL-204ENST00000414419 ZNF727A8MUV8 499 aa7.48□□□□□ -1.21
RFFL-204ENST00000414419 A8MWL6 223 aa7.48□□□□□ -1.21
RFFL-204ENST00000414419 M0QY20 66 aa7.48□□□□□ -1.21
RFFL-204ENST00000414419 NDUFS6O75380 124 aaKnown RBP7.48□□□□□ -1.21
RFFL-204ENST00000414419 CTRLP40313 264 aa7.48□□□□□ -1.21
RFFL-204ENST00000414419 Q0VG73 95 aa7.48□□□□□ -1.21
RFFL-204ENST00000414419 RASL11AQ6T310 242 aa7.48□□□□□ -1.21
RFFL-204ENST00000414419 FAM231DQ6ZW35 169 aa7.48□□□□□ -1.21
RFFL-204ENST00000414419 MAPKAPK5-AS1Q8N8E1 139 aa7.48□□□□□ -1.21
RFFL-204ENST00000414419 UBE2WQ96B02 151 aa7.48□□□□□ -1.21
RFFL-204ENST00000414419 IGKV2D-24A0A075B6R9 120 aa7.47□□□□□ -1.21
RFFL-204ENST00000414419 CRPP02741 224 aa7.47□□□□□ -1.21
RFFL-204ENST00000414419 GCSHP23434 173 aa7.47□□□□□ -1.21
RFFL-204ENST00000414419 Q8N814 137 aa7.47□□□□□ -1.21
RFFL-204ENST00000414419 NTN5Q8WTR8 489 aaPredicted RBP7.47□□□□□ -1.21
RFFL-204ENST00000414419 BORCS7Q96B45 105 aa7.47□□□□□ -1.21
RFFL-204ENST00000414419 HERC2O95714 4834 aa7.46□□□□□ -1.21
RFFL-204ENST00000414419 ANGP03950 147 aaKnown RBP7.46□□□□□ -1.22
RFFL-204ENST00000414419 SRP19P09132 144 aaKnown RBP7.46□□□□□ -1.22
RFFL-204ENST00000414419 C15orf54Q8N8G6 183 aa7.46□□□□□ -1.22
RFFL-204ENST00000414419 GTSF1Q8WW33 167 aa7.46□□□□□ -1.22
RFFL-204ENST00000414419 PGLYRP4Q96LB8 373 aa7.46□□□□□ -1.22
RFFL-204ENST00000414419 CNFNQ9BYD5 112 aa7.46□□□□□ -1.22
RFFL-204ENST00000414419 NIT2Q9NQR4 276 aa7.46□□□□□ -1.22
RFFL-204ENST00000414419 IGHV1-24A0A0C4DH33 117 aa7.45□□□□□ -1.22
RFFL-204ENST00000414419 FAM74A3Q4VXF1 159 aa7.45□□□□□ -1.22
RFFL-204ENST00000414419 MPV17L2Q567V2 206 aa7.45□□□□□ -1.22
RFFL-204ENST00000414419 CT83Q5H943 113 aa7.45□□□□□ -1.22
RFFL-204ENST00000414419 TEX261Q6UWH6 196 aa7.45□□□□□ -1.22
RFFL-204ENST00000414419 NTM-AS1Q6ZSK4 140 aa7.45□□□□□ -1.22
RFFL-204ENST00000414419 LINC01551Q86U37 167 aa7.45□□□□□ -1.22
RFFL-204ENST00000414419 LECT2O14960 151 aa7.44□□□□□ -1.22
RFFL-204ENST00000414419 GAGE6Q13070 117 aa7.44□□□□□ -1.22
RFFL-204ENST00000414419 PEA15Q15121 130 aa7.44□□□□□ -1.22
RFFL-204ENST00000414419 TMEM241Q24JQ0 296 aa7.44□□□□□ -1.22
RFFL-204ENST00000414419 ATRAIDQ6UW56 229 aa7.44□□□□□ -1.22
RFFL-204ENST00000414419 BAALCQ8WXS3 180 aa7.44□□□□□ -1.22
RFFL-204ENST00000414419 FRZBQ92765 325 aa7.44□□□□□ -1.22
RFFL-204ENST00000414419 C1orf43Q9BWL3 253 aa7.44□□□□□ -1.22
RFFL-204ENST00000414419 OSTCQ9NRP0 149 aa7.44□□□□□ -1.22
RFFL-204ENST00000414419 UBE2L6O14933 153 aa7.43□□□□□ -1.22
RFFL-204ENST00000414419 FOXA3P55318 350 aaPredicted RBP7.43□□□□□ -1.22
RFFL-204ENST00000414419 KRTAP10-1P60331 282 aa7.43□□□□□ -1.22
RFFL-204ENST00000414419 COTL1Q14019 142 aa7.43□□□□□ -1.22
RFFL-204ENST00000414419 IQCJQ1A5X6 159 aa7.43□□□□□ -1.22
RFFL-204ENST00000414419 Q8N976 141 aa7.43□□□□□ -1.22
RFFL-204ENST00000414419 TSKUQ8WUA8 353 aa7.43□□□□□ -1.22
RFFL-204ENST00000414419 TMEM243Q9BU79 118 aa7.43□□□□□ -1.22
RFFL-204ENST00000414419 GFRA4Q9GZZ7 299 aa7.43□□□□□ -1.22
RFFL-204ENST00000414419 LRP1BQ9NZR2 4599 aa7.43□□□□□ -1.22
RFFL-204ENST00000414419 TRAV26-2A0A0B4J265 109 aa7.42□□□□□ -1.22
RFFL-204ENST00000414419 FAM231BA6NCW3 169 aa7.42□□□□□ -1.22
RFFL-204ENST00000414419 HIGD1CA8MV81 97 aa7.42□□□□□ -1.22
RFFL-204ENST00000414419 RBX1P62877 108 aa7.42□□□□□ -1.22
RFFL-204ENST00000414419 MIAQ16674 131 aa7.42□□□□□ -1.22
RFFL-204ENST00000414419 ENHOQ6UWT2 76 aa7.42□□□□□ -1.22
RFFL-204ENST00000414419 Q8N1X5 172 aa7.42□□□□□ -1.22
RFFL-204ENST00000414419 GATD1Q8NB37 220 aa7.42□□□□□ -1.22
RFFL-204ENST00000414419 SMDT1Q9H4I9 107 aa7.42□□□□□ -1.22
RFFL-204ENST00000414419 IGLV2-33A0A075B6J2 118 aaPredicted RBP7.41□□□□□ -1.22
RFFL-204ENST00000414419 A0A1B0GUT8 65 aa7.41□□□□□ -1.22
RFFL-204ENST00000414419 AMTP48728 403 aa7.41□□□□□ -1.22
RFFL-204ENST00000414419 WFDC2Q14508 124 aa7.41□□□□□ -1.22
RFFL-204ENST00000414419 ADIRFQ15847 76 aa7.41□□□□□ -1.22
RFFL-204ENST00000414419 LINC00269Q8N2A0 174 aa7.41□□□□□ -1.22
RFFL-204ENST00000414419 DEFB104AQ8WTQ1 72 aa7.41□□□□□ -1.22
RFFL-204ENST00000414419 NAT8Q9UHE5 227 aa7.41□□□□□ -1.22
RFFL-204ENST00000414419 HLA-DQA1P01909 254 aa7.4□□□□□ -1.22
RFFL-204ENST00000414419 RPL23P62829 140 aaKnown RBP7.4□□□□□ -1.22
RFFL-204ENST00000414419 C14orf177Q52M58 125 aa7.4□□□□□ -1.22
RFFL-204ENST00000414419 CLPSL2Q6UWE3 100 aa7.4□□□□□ -1.22
RFFL-204ENST00000414419 ISOC2Q96AB3 205 aa7.4□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 71 ms