RNA–Protein interactions for RNA: ENST00000413232.5

CPSF7-204, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 3

Gene CPSF7, Length 727 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-204ENST00000413232 C1orf43Q9BWL3 253 aa12.47□□□□□ -0.41
CPSF7-204ENST00000413232 UMAD1C9J7I0 102 aa12.46□□□□□ -0.41
CPSF7-204ENST00000413232 ANGP03950 147 aaKnown RBP12.46□□□□□ -0.41
CPSF7-204ENST00000413232 CCL20P78556 96 aa12.46□□□□□ -0.41
CPSF7-204ENST00000413232 DERL1Q9BUN8 251 aa12.46□□□□□ -0.41
CPSF7-204ENST00000413232 F5H697 171 aa12.45□□□□□ -0.42
CPSF7-204ENST00000413232 SPANXN1Q5VSR9 72 aa12.45□□□□□ -0.42
CPSF7-204ENST00000413232 CHCHD5Q9BSY4 110 aa12.45□□□□□ -0.42
CPSF7-204ENST00000413232 FAT3Q8TDW7 4589 aa12.44□□□□□ -0.42
CPSF7-204ENST00000413232 HMSDA8MTL9 139 aa12.44□□□□□ -0.42
CPSF7-204ENST00000413232 USP17L23D6RBM5 183 aa12.44□□□□□ -0.42
CPSF7-204ENST00000413232 PFDN1O60925 122 aa12.44□□□□□ -0.42
CPSF7-204ENST00000413232 H2AFB1P0C5Y9 115 aa12.44□□□□□ -0.42
CPSF7-204ENST00000413232 GZMBP10144 247 aa12.44□□□□□ -0.42
CPSF7-204ENST00000413232 RPL35P42766 123 aaKnown RBP12.44□□□□□ -0.42
CPSF7-204ENST00000413232 KRTAP26-1Q6PEX3 210 aa12.44□□□□□ -0.42
CPSF7-204ENST00000413232 VAX2Q9UIW0 290 aa12.44□□□□□ -0.42
CPSF7-204ENST00000413232 BCL2L11O43521 198 aa12.43□□□□□ -0.42
CPSF7-204ENST00000413232 CRPP02741 224 aa12.43□□□□□ -0.42
CPSF7-204ENST00000413232 PRSS1P07477 247 aa12.43□□□□□ -0.42
CPSF7-204ENST00000413232 CLPSL2Q6UWE3 100 aa12.43□□□□□ -0.42
CPSF7-204ENST00000413232 PKHD1L1Q86WI1 4243 aa12.42□□□□□ -0.42
CPSF7-204ENST00000413232 IGLV2-8P01709 118 aa12.42□□□□□ -0.42
CPSF7-204ENST00000413232 HLA-DQA1P01909 254 aa12.42□□□□□ -0.42
CPSF7-204ENST00000413232 GAGE6Q13070 117 aa12.42□□□□□ -0.42
CPSF7-204ENST00000413232 PRR34Q9NV39 138 aa12.42□□□□□ -0.42
CPSF7-204ENST00000413232 A0A0D9SG52 128 aa12.41□□□□□ -0.42
CPSF7-204ENST00000413232 RBX1P62877 108 aa12.41□□□□□ -0.42
CPSF7-204ENST00000413232 C14orf177Q52M58 125 aa12.41□□□□□ -0.42
CPSF7-204ENST00000413232 KANTRA0A1W2PQU2 76 aa12.4□□□□□ -0.42
CPSF7-204ENST00000413232 MIAQ16674 131 aa12.4□□□□□ -0.42
CPSF7-204ENST00000413232 LINC00269Q8N2A0 174 aa12.4□□□□□ -0.42
CPSF7-204ENST00000413232 C11orf52Q96A22 123 aa12.4□□□□□ -0.42
CPSF7-204ENST00000413232 M0QY20 66 aa12.39□□□□□ -0.43
CPSF7-204ENST00000413232 IGLC6P0CF74 106 aa12.39□□□□□ -0.43
CPSF7-204ENST00000413232 AP1S3Q96PC3 154 aa12.39□□□□□ -0.43
CPSF7-204ENST00000413232 GNG13Q9P2W3 67 aa12.39□□□□□ -0.43
CPSF7-204ENST00000413232 PANO1I0J062 215 aa12.38□□□□□ -0.43
CPSF7-204ENST00000413232 SMIM17P0DL12 118 aa12.38□□□□□ -0.43
CPSF7-204ENST00000413232 CENPWQ5EE01 88 aa12.38□□□□□ -0.43
CPSF7-204ENST00000413232 RAB19A4D1S5 217 aa12.37□□□□□ -0.43
CPSF7-204ENST00000413232 C19orf71A6NCJ1 209 aa12.37□□□□□ -0.43
CPSF7-204ENST00000413232 IQCJQ1A5X6 159 aa12.37□□□□□ -0.43
CPSF7-204ENST00000413232 TMEM97Q5BJF2 176 aa12.37□□□□□ -0.43
CPSF7-204ENST00000413232 SUMO4Q6EEV6 95 aa12.37□□□□□ -0.43
CPSF7-204ENST00000413232 TPPP3Q9BW30 176 aa12.37□□□□□ -0.43
CPSF7-204ENST00000413232 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP12.37□□□□□ -0.43
CPSF7-204ENST00000413232 TRBV25-1A0A075B6N4 114 aa12.36□□□□□ -0.43
CPSF7-204ENST00000413232 MGPP08493 103 aa12.36□□□□□ -0.43
CPSF7-204ENST00000413232 HNRNPA3P51991 378 aaKnown RBP12.36□□□□□ -0.43
CPSF7-204ENST00000413232 PKIAP61925 76 aa12.36□□□□□ -0.43
CPSF7-204ENST00000413232 C9orf163Q8N9P6 203 aa12.36□□□□□ -0.43
CPSF7-204ENST00000413232 SREK1IP1Q8N9Q2 155 aaPredicted RBP12.36□□□□□ -0.43
CPSF7-204ENST00000413232 FER1L6-AS1Q8NA97 138 aa12.36□□□□□ -0.43
CPSF7-204ENST00000413232 C20orf203Q8NBC4 194 aa12.36□□□□□ -0.43
CPSF7-204ENST00000413232 OR2D3Q8NGH3 330 aa12.36□□□□□ -0.43
CPSF7-204ENST00000413232 IGLV10-54A0A075B6I4 117 aa12.35□□□□□ -0.43
CPSF7-204ENST00000413232 TRAV1-1A0A0B4J248 108 aa12.35□□□□□ -0.43
CPSF7-204ENST00000413232 DGAT2L7PQ6IED9 249 aa12.35□□□□□ -0.43
CPSF7-204ENST00000413232 GFRA4Q9GZZ7 299 aa12.35□□□□□ -0.43
CPSF7-204ENST00000413232 MANBALQ9NQG1 85 aa12.35□□□□□ -0.43
CPSF7-204ENST00000413232 TRBV20OR9-2A0A075B6H5 130 aa12.34□□□□□ -0.43
CPSF7-204ENST00000413232 IGHV1-24A0A0C4DH33 117 aa12.34□□□□□ -0.43
CPSF7-204ENST00000413232 DAZAP1Q96EP5 407 aaKnown RBP12.34□□□□□ -0.43
CPSF7-204ENST00000413232 IGLV4-60A0A075B6I1 120 aa12.33□□□□□ -0.44
CPSF7-204ENST00000413232 NKX2-5P52952 324 aaPredicted RBP12.33□□□□□ -0.44
CPSF7-204ENST00000413232 EIF5AP63241 154 aaKnown RBP12.33□□□□□ -0.44
CPSF7-204ENST00000413232 REG3AQ06141 175 aa12.33□□□□□ -0.44
CPSF7-204ENST00000413232 SDIM1Q6ZPB5 146 aa12.33□□□□□ -0.44
CPSF7-204ENST00000413232 OXTP01178 125 aa12.32□□□□□ -0.44
CPSF7-204ENST00000413232 RPL37AP61513 92 aaKnown RBP12.32□□□□□ -0.44
CPSF7-204ENST00000413232 RPS20P60866 119 aaKnown RBP12.31□□□□□ -0.44
CPSF7-204ENST00000413232 CACNG7P62955 275 aa12.31□□□□□ -0.44
CPSF7-204ENST00000413232 LYZL1Q6UWQ5 148 aa12.31□□□□□ -0.44
CPSF7-204ENST00000413232 SLPIP03973 132 aa12.3□□□□□ -0.44
CPSF7-204ENST00000413232 GNG4P50150 75 aa12.3□□□□□ -0.44
CPSF7-204ENST00000413232 RASL11AQ6T310 242 aa12.3□□□□□ -0.44
CPSF7-204ENST00000413232 H7C1H1 209 aa12.29□□□□□ -0.44
CPSF7-204ENST00000413232 NTF3P20783 257 aa12.29□□□□□ -0.44
CPSF7-204ENST00000413232 SULT1A2P50226 295 aa12.29□□□□□ -0.44
CPSF7-204ENST00000413232 RAB5CP51148 216 aa12.29□□□□□ -0.44
CPSF7-204ENST00000413232 MEF2BQ02080 365 aaPredicted RBP12.29□□□□□ -0.44
CPSF7-204ENST00000413232 TMEM243Q9BU79 118 aa12.29□□□□□ -0.44
CPSF7-204ENST00000413232 HMCN2Q8NDA2 5059 aa12.29□□□□□ -0.44
CPSF7-204ENST00000413232 A0A1B0GUV1 79 aa12.28□□□□□ -0.44
CPSF7-204ENST00000413232 P01737 135 aa12.28□□□□□ -0.44
CPSF7-204ENST00000413232 NIT2Q9NQR4 276 aa12.28□□□□□ -0.44
CPSF7-204ENST00000413232 MED9Q9NWA0 146 aa12.28□□□□□ -0.44
CPSF7-204ENST00000413232 F2Z2F3 143 aa12.27□□□□□ -0.45
CPSF7-204ENST00000413232 IFNA1P01562 189 aa12.27□□□□□ -0.45
CPSF7-204ENST00000413232 C9orf62Q8N4C0 152 aa12.27□□□□□ -0.45
CPSF7-204ENST00000413232 CLRN3Q8NCR9 226 aa12.27□□□□□ -0.45
CPSF7-204ENST00000413232 NUDT10Q8NFP7 164 aa12.27□□□□□ -0.45
CPSF7-204ENST00000413232 SMIM12Q96EX1 92 aa12.27□□□□□ -0.45
CPSF7-204ENST00000413232 NUDT11Q96G61 164 aa12.27□□□□□ -0.45
CPSF7-204ENST00000413232 DPH3P1Q9H4G8 78 aa12.27□□□□□ -0.45
CPSF7-204ENST00000413232 hDV102S1A0JD36 115 aa12.26□□□□□ -0.45
CPSF7-204ENST00000413232 CNBPP62633 177 aaKnown RBP12.26□□□□□ -0.45
CPSF7-204ENST00000413232 SERTAD4-AS1Q5TG53 156 aa12.26□□□□□ -0.45
CPSF7-204ENST00000413232 PGLYRP4Q96LB8 373 aa12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 61.4 ms