RNA–Protein interactions for RNA: ENST00000412342.5

HDAC8-210, Transcript of histone deacetylase 8, humanhuman

TSL 1 (best)

Gene HDAC8, Length 679 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-210ENST00000412342 TWIST1Q15672 202 aa8.93□□□□□ -0.98
HDAC8-210ENST00000412342 C15orf54Q8N8G6 183 aa8.93□□□□□ -0.98
HDAC8-210ENST00000412342 RPL36ALQ969Q0 106 aaKnown RBP8.93□□□□□ -0.98
HDAC8-210ENST00000412342 PGLYRP4Q96LB8 373 aa8.93□□□□□ -0.98
HDAC8-210ENST00000412342 F5H697 171 aa8.92□□□□□ -0.98
HDAC8-210ENST00000412342 MGPP08493 103 aa8.92□□□□□ -0.98
HDAC8-210ENST00000412342 BTF3P20290 206 aaKnown RBP8.92□□□□□ -0.98
HDAC8-210ENST00000412342 LINC01556Q5JQF7 62 aa8.92□□□□□ -0.98
HDAC8-210ENST00000412342 DNAH5Q8TE73 4624 aa8.91□□□□□ -0.98
HDAC8-210ENST00000412342 TRAV8-6A0A0B4J262 113 aa8.91□□□□□ -0.98
HDAC8-210ENST00000412342 IGHV3-38A0A0C4DH36 116 aa8.91□□□□□ -0.98
HDAC8-210ENST00000412342 PRSS29PA6NIE9 313 aa8.91□□□□□ -0.98
HDAC8-210ENST00000412342 OR10J3Q5JRS4 329 aa8.91□□□□□ -0.98
HDAC8-210ENST00000412342 Q6ZRN7 208 aaPredicted RBP8.91□□□□□ -0.98
HDAC8-210ENST00000412342 NUP35Q8NFH5 326 aa8.91□□□□□ -0.98
HDAC8-210ENST00000412342 A0A087WWC5 75 aa8.9□□□□□ -0.98
HDAC8-210ENST00000412342 A0A1B0GUT8 65 aa8.9□□□□□ -0.98
HDAC8-210ENST00000412342 SMIM27A0A1W2PRY6 76 aa8.9□□□□□ -0.98
HDAC8-210ENST00000412342 K7EP13 123 aa8.9□□□□□ -0.98
HDAC8-210ENST00000412342 Q8N3U1 123 aa8.9□□□□□ -0.98
HDAC8-210ENST00000412342 PKHD1P08F94 4074 aa8.9□□□□□ -0.98
HDAC8-210ENST00000412342 H7C1H1 209 aa8.89□□□□□ -0.99
HDAC8-210ENST00000412342 ADCYAP1P18509 176 aa8.89□□□□□ -0.99
HDAC8-210ENST00000412342 TNP2Q05952 138 aa8.89□□□□□ -0.99
HDAC8-210ENST00000412342 RASL11AQ6T310 242 aa8.89□□□□□ -0.99
HDAC8-210ENST00000412342 UQCC3Q6UW78 93 aa8.89□□□□□ -0.99
HDAC8-210ENST00000412342 GATD1Q8NB37 220 aa8.89□□□□□ -0.99
HDAC8-210ENST00000412342 DNAJC30Q96LL9 226 aa8.89□□□□□ -0.99
HDAC8-210ENST00000412342 TNFRSF18Q9Y5U5 241 aa8.89□□□□□ -0.99
HDAC8-210ENST00000412342 PNRC1Q12796 327 aaPredicted RBP8.88□□□□□ -0.99
HDAC8-210ENST00000412342 NTM-AS1Q6ZSK4 140 aa8.88□□□□□ -0.99
HDAC8-210ENST00000412342 TMEM191AQ9H0A3 160 aa8.88□□□□□ -0.99
HDAC8-210ENST00000412342 NAT8BQ9UHF3 227 aa8.88□□□□□ -0.99
HDAC8-210ENST00000412342 TRAV9-2A0A087WT02 112 aa8.87□□□□□ -0.99
HDAC8-210ENST00000412342 TRBV6-8A0A0A6YYG3 113 aa8.87□□□□□ -0.99
HDAC8-210ENST00000412342 TRAV26-2A0A0B4J265 109 aa8.87□□□□□ -0.99
HDAC8-210ENST00000412342 DAZ4Q86SG3 579 aaKnown RBP8.87□□□□□ -0.99
HDAC8-210ENST00000412342 NIT1Q86X76 327 aa8.87□□□□□ -0.99
HDAC8-210ENST00000412342 C10orf126Q8N4M7 172 aa8.87□□□□□ -0.99
HDAC8-210ENST00000412342 BORCS7Q96B45 105 aa8.87□□□□□ -0.99
HDAC8-210ENST00000412342 RNF185Q96GF1 192 aa8.87□□□□□ -0.99
HDAC8-210ENST00000412342 NIT2Q9NQR4 276 aa8.87□□□□□ -0.99
HDAC8-210ENST00000412342 DAZ3Q9NR90 486 aaKnown RBP8.87□□□□□ -0.99
HDAC8-210ENST00000412342 TMEM218A2RU14 115 aa8.86□□□□□ -0.99
HDAC8-210ENST00000412342 LINC00862A6NCI5 91 aa8.86□□□□□ -0.99
HDAC8-210ENST00000412342 IBA57-AS1B1ANH7 110 aa8.86□□□□□ -0.99
HDAC8-210ENST00000412342 IGHV3-30P01768 117 aa8.86□□□□□ -0.99
HDAC8-210ENST00000412342 IGHV3-33P01772 117 aa8.86□□□□□ -0.99
HDAC8-210ENST00000412342 IGHV3-30-3P0DP02 117 aa8.86□□□□□ -0.99
HDAC8-210ENST00000412342 IGHV3-30-5P0DP03 117 aa8.86□□□□□ -0.99
HDAC8-210ENST00000412342 SMIM15Q7Z3B0 74 aa8.86□□□□□ -0.99
HDAC8-210ENST00000412342 FRZBQ92765 325 aa8.86□□□□□ -0.99
HDAC8-210ENST00000412342 LRP1BQ9NZR2 4599 aa8.86□□□□□ -0.99
HDAC8-210ENST00000412342 GAS8-AS1O95177 125 aa8.85□□□□□ -0.99
HDAC8-210ENST00000412342 RIGQ13278 110 aa8.85□□□□□ -0.99
HDAC8-210ENST00000412342 COMMD7Q86VX2 200 aa8.85□□□□□ -0.99
HDAC8-210ENST00000412342 RPL39LQ96EH5 51 aaKnown RBP8.85□□□□□ -0.99
HDAC8-210ENST00000412342 A0A1B0GXF2 115 aa8.84□□□□□ -0.99
HDAC8-210ENST00000412342 RAB4AP20338 218 aa8.84□□□□□ -0.99
HDAC8-210ENST00000412342 AMN1Q8IY45 258 aa8.84□□□□□ -0.99
HDAC8-210ENST00000412342 TRBV6-5A0A0K0K1A5 114 aa8.83□□□□□ -1
HDAC8-210ENST00000412342 PPP1R2P9O14990 202 aa8.83□□□□□ -1
HDAC8-210ENST00000412342 LAGE3Q14657 143 aa8.83□□□□□ -1
HDAC8-210ENST00000412342 IQCJQ1A5X6 159 aa8.83□□□□□ -1
HDAC8-210ENST00000412342 TMEM97Q5BJF2 176 aa8.83□□□□□ -1
HDAC8-210ENST00000412342 NFE4Q86UQ8 179 aa8.83□□□□□ -1
HDAC8-210ENST00000412342 ANAPC16Q96DE5 110 aa8.83□□□□□ -1
HDAC8-210ENST00000412342 CHCHD7Q9BUK0 85 aa8.83□□□□□ -1
HDAC8-210ENST00000412342 F8W036 122 aa8.82□□□□□ -1
HDAC8-210ENST00000412342 RPS10P46783 165 aaKnown RBP8.82□□□□□ -1
HDAC8-210ENST00000412342 SREK1IP1Q8N9Q2 155 aaPredicted RBP8.82□□□□□ -1
HDAC8-210ENST00000412342 SEC11CQ9BY50 192 aa8.82□□□□□ -1
HDAC8-210ENST00000412342 A0A1B0GW15 77 aa8.81□□□□□ -1
HDAC8-210ENST00000412342 MT-ND4LP03901 98 aa8.81□□□□□ -1
HDAC8-210ENST00000412342 MPV17L2Q567V2 206 aa8.81□□□□□ -1
HDAC8-210ENST00000412342 C10orf91Q5T1B1 145 aa8.81□□□□□ -1
HDAC8-210ENST00000412342 FAM104BQ5XKR9 115 aa8.81□□□□□ -1
HDAC8-210ENST00000412342 MRPL54Q6P161 138 aaKnown RBP8.81□□□□□ -1
HDAC8-210ENST00000412342 MRAP2Q96G30 205 aa8.81□□□□□ -1
HDAC8-210ENST00000412342 KIAA1109Q2LD37 5005 aa8.81□□□□□ -1
HDAC8-210ENST00000412342 TRBV25-1A0A075B6N4 114 aa8.8□□□□□ -1
HDAC8-210ENST00000412342 IGHV1-24A0A0C4DH33 117 aa8.8□□□□□ -1
HDAC8-210ENST00000412342 SDHAF1A6NFY7 115 aa8.8□□□□□ -1
HDAC8-210ENST00000412342 CAMPP49913 170 aa8.8□□□□□ -1
HDAC8-210ENST00000412342 HBBP68871 147 aa8.8□□□□□ -1
HDAC8-210ENST00000412342 MRPL51Q4U2R6 128 aaKnown RBP8.8□□□□□ -1
HDAC8-210ENST00000412342 NRACQ8N912 160 aa8.8□□□□□ -1
HDAC8-210ENST00000412342 DEFB104AQ8WTQ1 72 aa8.8□□□□□ -1
HDAC8-210ENST00000412342 CHCHD5Q9BSY4 110 aa8.8□□□□□ -1
HDAC8-210ENST00000412342 A0A087WX48 190 aa8.79□□□□□ -1
HDAC8-210ENST00000412342 SMKR1H3BMG3 65 aa8.79□□□□□ -1
HDAC8-210ENST00000412342 NCR2O95944 276 aa8.79□□□□□ -1
HDAC8-210ENST00000412342 KCNIP4Q6PIL6 250 aa8.79□□□□□ -1
HDAC8-210ENST00000412342 ATRAIDQ6UW56 229 aa8.79□□□□□ -1
HDAC8-210ENST00000412342 ATP5L2Q7Z4Y8 100 aa8.79□□□□□ -1
HDAC8-210ENST00000412342 TMEM70Q9BUB7 260 aa8.79□□□□□ -1
HDAC8-210ENST00000412342 Q9HAA7 133 aa8.79□□□□□ -1
HDAC8-210ENST00000412342 KLK12Q9UKR0 248 aa8.79□□□□□ -1
HDAC8-210ENST00000412342 URGCP-MRPS24S4R325 110 aa8.79□□□□□ -1
HDAC8-210ENST00000412342 APOBP04114 4563 aaKnown RBP8.78□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 10.1 ms