RNA–Protein interactions for RNA: ENST00000412272.6

HERC4-205, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 1 (best) BASIC

Gene HERC4, Length 4,211 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-205ENST00000412272 IMMP1LQ96LU5 166 aa3.81□□□□□ -1.8
HERC4-205ENST00000412272 IGLV2-23P01705 113 aa3.81□□□□□ -1.8
HERC4-205ENST00000412272 M0R1W7 72 aa3.8□□□□□ -1.8
HERC4-205ENST00000412272 BAALC-AS2P0C853 105 aa3.8□□□□□ -1.8
HERC4-205ENST00000412272 BLCAPP62952 87 aa3.8□□□□□ -1.8
HERC4-205ENST00000412272 SCGB3A1Q96QR1 104 aa3.8□□□□□ -1.8
HERC4-205ENST00000412272 DCTN5Q9BTE1 182 aa3.8□□□□□ -1.8
HERC4-205ENST00000412272 DEFB126Q9BYW3 111 aa3.8□□□□□ -1.8
HERC4-205ENST00000412272 VCYO14598 125 aa3.8□□□□□ -1.8
HERC4-205ENST00000412272 CCL17Q92583 94 aa3.8□□□□□ -1.8
HERC4-205ENST00000412272 LITAFQ99732 161 aa3.8□□□□□ -1.8
HERC4-205ENST00000412272 PCNX2A6NKB5 2137 aa3.8□□□□□ -1.8
HERC4-205ENST00000412272 MRPL33O75394 65 aaKnown RBP3.8□□□□□ -1.8
HERC4-205ENST00000412272 PPP1R17O96001 155 aa3.8□□□□□ -1.8
HERC4-205ENST00000412272 MSRB1Q9NZV6 116 aa3.8□□□□□ -1.8
HERC4-205ENST00000412272 SRRM5B3KS81 715 aa3.79□□□□□ -1.8
HERC4-205ENST00000412272 CCL3P10147 92 aa3.79□□□□□ -1.8
HERC4-205ENST00000412272 PI4KAP42356 2102 aa3.79□□□□□ -1.8
HERC4-205ENST00000412272 ZNF876PQ49A33 203 aa3.79□□□□□ -1.8
HERC4-205ENST00000412272 LCA10Q71F78 164 aa3.79□□□□□ -1.8
HERC4-205ENST00000412272 OPRPNQ99935 248 aaPredicted RBP3.79□□□□□ -1.8
HERC4-205ENST00000412272 IGHV7-4-1A0A0J9YVY3 117 aa3.79□□□□□ -1.8
HERC4-205ENST00000412272 IGHV5-10-1A0A0J9YXX1 117 aa3.79□□□□□ -1.8
HERC4-205ENST00000412272 MED14OSP0DP75 135 aa3.79□□□□□ -1.8
HERC4-205ENST00000412272 SYCNQ0VAF6 134 aa3.79□□□□□ -1.8
HERC4-205ENST00000412272 WFDC9Q8NEX5 89 aa3.79□□□□□ -1.8
HERC4-205ENST00000412272 OBSCN-AS1Q96MR7 158 aa3.79□□□□□ -1.8
HERC4-205ENST00000412272 ZNF576Q9H609 170 aa3.79□□□□□ -1.8
HERC4-205ENST00000412272 C5orf67F2Z3F1 127 aa3.79□□□□□ -1.8
HERC4-205ENST00000412272 F6UB75 175 aa3.79□□□□□ -1.8
HERC4-205ENST00000412272 Q6ZTC4 211 aa3.79□□□□□ -1.8
HERC4-205ENST00000412272 A0A0J9YXY3 114 aa3.78□□□□□ -1.8
HERC4-205ENST00000412272 TSHBP01222 138 aa3.78□□□□□ -1.8
HERC4-205ENST00000412272 IGHV1-69P01742 117 aa3.78□□□□□ -1.8
HERC4-205ENST00000412272 IGKV1-16P04430 117 aa3.78□□□□□ -1.8
HERC4-205ENST00000412272 MDFIQ99750 246 aa3.78□□□□□ -1.8
HERC4-205ENST00000412272 RFPL3SP0C7P2 107 aa3.78□□□□□ -1.8
HERC4-205ENST00000412272 UBE2BP63146 152 aa3.78□□□□□ -1.8
HERC4-205ENST00000412272 C9orf129Q5T035 196 aaKnown RBP3.78□□□□□ -1.8
HERC4-205ENST00000412272 DIRC1Q969H9 104 aa3.78□□□□□ -1.8
HERC4-205ENST00000412272 TRBV7-4A0A0J9YYF1 115 aa3.78□□□□□ -1.8
HERC4-205ENST00000412272 M0R3E3 92 aa3.78□□□□□ -1.8
HERC4-205ENST00000412272 UBE2L6O14933 153 aa3.78□□□□□ -1.8
HERC4-205ENST00000412272 MRPS21P82921 87 aaKnown RBP3.78□□□□□ -1.8
HERC4-205ENST00000412272 TRAV12-3A0A0B4J271 114 aa3.78□□□□□ -1.81
HERC4-205ENST00000412272 I3L2K1 104 aa3.78□□□□□ -1.81
HERC4-205ENST00000412272 COX7A2LO14548 114 aa3.78□□□□□ -1.81
HERC4-205ENST00000412272 DNAL4O96015 105 aa3.78□□□□□ -1.81
HERC4-205ENST00000412272 DEFB103AP81534 67 aa3.78□□□□□ -1.81
HERC4-205ENST00000412272 ATP5EP2Q5VTU8 51 aa3.78□□□□□ -1.81
HERC4-205ENST00000412272 HCP5Q6MZN7 132 aa3.78□□□□□ -1.81
HERC4-205ENST00000412272 C2orf66Q6UXQ4 117 aa3.78□□□□□ -1.81
HERC4-205ENST00000412272 ZNF826PQ6ZT77 177 aa3.78□□□□□ -1.81
HERC4-205ENST00000412272 TMEM61Q8N0U2 210 aa3.78□□□□□ -1.81
HERC4-205ENST00000412272 TRBV10-3A0A0K0K1G6 114 aa3.77□□□□□ -1.81
HERC4-205ENST00000412272 SUMO2P61956 95 aaKnown RBP3.77□□□□□ -1.81
HERC4-205ENST00000412272 Q0VFX4 171 aa3.77□□□□□ -1.81
HERC4-205ENST00000412272 LYRM9A8MSI8 78 aa3.77□□□□□ -1.81
HERC4-205ENST00000412272 C16orf90A8MZG2 172 aa3.77□□□□□ -1.81
HERC4-205ENST00000412272 FUSP35637 526 aaKnown RBP eCLIP3.77□□□□□ -1.812e-6■■■■□ 19.5
HERC4-205ENST00000412272 FOLR3P41439 243 aa3.77□□□□□ -1.81
HERC4-205ENST00000412272 C7orf65Q6ZTY9 151 aa3.77□□□□□ -1.81
HERC4-205ENST00000412272 ZFAND3Q9H8U3 227 aa3.77□□□□□ -1.81
HERC4-205ENST00000412272 PHLDA3Q9Y5J5 127 aa3.77□□□□□ -1.81
HERC4-205ENST00000412272 IGHV4OR15-8A0A075B7B6 117 aa3.76□□□□□ -1.81
HERC4-205ENST00000412272 A0A087WW49 117 aa3.76□□□□□ -1.81
HERC4-205ENST00000412272 A0A096LPE4 126 aa3.76□□□□□ -1.81
HERC4-205ENST00000412272 TRAV22A0A0B4J277 110 aa3.76□□□□□ -1.81
HERC4-205ENST00000412272 A0A1W2PPZ6 126 aa3.76□□□□□ -1.81
HERC4-205ENST00000412272 hDV103S1A0JD37 113 aa3.76□□□□□ -1.81
HERC4-205ENST00000412272 LINC00313P59037 77 aa3.76□□□□□ -1.81
HERC4-205ENST00000412272 KLK15Q9H2R5 256 aa3.76□□□□□ -1.81
HERC4-205ENST00000412272 PSPHP1O15172 72 aa3.76□□□□□ -1.81
HERC4-205ENST00000412272 IGKV1-17P01599 117 aa3.76□□□□□ -1.81
HERC4-205ENST00000412272 ENHOQ6UWT2 76 aa3.76□□□□□ -1.81
HERC4-205ENST00000412272 LINC00337Q8N6G1 96 aa3.76□□□□□ -1.81
HERC4-205ENST00000412272 C14orf132Q9NPU4 83 aa3.76□□□□□ -1.81
HERC4-205ENST00000412272 IGKV3D-20A0A0C4DH25 116 aa3.75□□□□□ -1.81
HERC4-205ENST00000412272 TRGV3P03979 118 aa3.75□□□□□ -1.81
HERC4-205ENST00000412272 MIAQ16674 131 aa3.75□□□□□ -1.81
HERC4-205ENST00000412272 GPHB5Q86YW7 130 aa3.75□□□□□ -1.81
HERC4-205ENST00000412272 LINC01356Q8N9X3 169 aa3.75□□□□□ -1.81
HERC4-205ENST00000412272 TRAV10A0A0B4J240 114 aa3.75□□□□□ -1.81
HERC4-205ENST00000412272 FAM218AQ96MZ4 157 aa3.75□□□□□ -1.81
HERC4-205ENST00000412272 PDE4DIPQ5VU43 2346 aa3.75□□□□□ -1.81
HERC4-205ENST00000412272 A0A0A0MQY5 61 aa3.75□□□□□ -1.81
HERC4-205ENST00000412272 BUB1B-PAK6H3BSN5 160 aa3.75□□□□□ -1.81
HERC4-205ENST00000412272 LYZP61626 148 aa3.75□□□□□ -1.81
HERC4-205ENST00000412272 ZGRF1Q86YA3 2104 aa3.75□□□□□ -1.81
HERC4-205ENST00000412272 LENEPQ9Y5L5 61 aa3.75□□□□□ -1.81
HERC4-205ENST00000412272 IGKV3-15P01624 115 aa3.74□□□□□ -1.81
HERC4-205ENST00000412272 CD28P10747 220 aa3.74□□□□□ -1.81
HERC4-205ENST00000412272 KLK9Q2XQG4 91 aa3.74□□□□□ -1.81
HERC4-205ENST00000412272 ATP11AUNQ6ZP68 121 aa3.74□□□□□ -1.81
HERC4-205ENST00000412272 LINC00269Q8N2A0 174 aa3.74□□□□□ -1.81
HERC4-205ENST00000412272 Q8N6K4 173 aa3.74□□□□□ -1.81
HERC4-205ENST00000412272 KLK9Q9UKQ9 250 aa3.74□□□□□ -1.81
HERC4-205ENST00000412272 RP1P56715 2156 aa3.74□□□□□ -1.81
HERC4-205ENST00000412272 IGHV1-18A0A0C4DH31 117 aa3.74□□□□□ -1.81
HERC4-205ENST00000412272 TRBV6-5A0A0K0K1A5 114 aa3.74□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 86.4 ms