RNA–Protein interactions for RNA: ENST00000410731.1

RNU4-55P-201, Transcript of RNA, U4 small nuclear 55, pseudogene, humanhuman

BASIC

Gene RNU4-55P, Length 137 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-55P-201ENST00000410731 FAM135BQ49AJ0 1406 aa-1.25□□□□□ -2.61
RNU4-55P-201ENST00000410731 ZZEF1O43149 2961 aa-1.26□□□□□ -2.61
RNU4-55P-201ENST00000410731 NUP210Q8TEM1 1887 aaPredicted RBP-1.26□□□□□ -2.61
RNU4-55P-201ENST00000410731 SLC25A6P12236 298 aa-1.26□□□□□ -2.61
RNU4-55P-201ENST00000410731 EDDM3BP56851 147 aa-1.26□□□□□ -2.61
RNU4-55P-201ENST00000410731 ARF6P62330 175 aa-1.26□□□□□ -2.61
RNU4-55P-201ENST00000410731 CFAP126Q5VTH2 177 aa-1.26□□□□□ -2.61
RNU4-55P-201ENST00000410731 LINC00472Q9H8W2 130 aa-1.26□□□□□ -2.61
RNU4-55P-201ENST00000410731 NUBP2Q9Y5Y2 271 aa-1.26□□□□□ -2.61
RNU4-55P-201ENST00000410731 DNAH7Q8WXX0 4024 aa-1.26□□□□□ -2.61
RNU4-55P-201ENST00000410731 PTPRMP28827 1452 aa-1.26□□□□□ -2.61
RNU4-55P-201ENST00000410731 PKD1L2Q7Z442 2459 aa-1.26□□□□□ -2.61
RNU4-55P-201ENST00000410731 MGAM2Q2M2H8 2515 aa-1.27□□□□□ -2.61
RNU4-55P-201ENST00000410731 ANKRD11Q6UB99 2663 aaPredicted RBP-1.27□□□□□ -2.61
RNU4-55P-201ENST00000410731 SACSQ9NZJ4 4579 aa-1.27□□□□□ -2.61
RNU4-55P-201ENST00000410731 TRAV2A0A0B4J234 112 aa-1.27□□□□□ -2.61
RNU4-55P-201ENST00000410731 SDC2P34741 201 aa-1.27□□□□□ -2.61
RNU4-55P-201ENST00000410731 LSM3P62310 102 aaKnown RBP-1.27□□□□□ -2.61
RNU4-55P-201ENST00000410731 SPCS2Q15005 226 aa-1.27□□□□□ -2.61
RNU4-55P-201ENST00000410731 LTC4SQ16873 150 aa-1.27□□□□□ -2.61
RNU4-55P-201ENST00000410731 SLC25A26Q70HW3 274 aa-1.27□□□□□ -2.61
RNU4-55P-201ENST00000410731 LINC00305Q7Z4B0 112 aa-1.27□□□□□ -2.61
RNU4-55P-201ENST00000410731 TEX29Q8N6K0 151 aa-1.27□□□□□ -2.61
RNU4-55P-201ENST00000410731 DEFB105AQ8NG35 78 aa-1.27□□□□□ -2.61
RNU4-55P-201ENST00000410731 TAS2R8Q9NYW2 309 aa-1.27□□□□□ -2.61
RNU4-55P-201ENST00000410731 MED11Q9P086 117 aa-1.27□□□□□ -2.61
RNU4-55P-201ENST00000410731 LAMTOR3Q9UHA4 124 aa-1.27□□□□□ -2.61
RNU4-55P-201ENST00000410731 NDUFAF1Q9Y375 327 aa-1.27□□□□□ -2.61
RNU4-55P-201ENST00000410731 CCDC171Q6TFL3 1326 aa-1.27□□□□□ -2.61
RNU4-55P-201ENST00000410731 TRAV13-1A0A0B4J241 112 aa-1.28□□□□□ -2.61
RNU4-55P-201ENST00000410731 PNMA8CA0A1B0GUJ8 204 aa-1.28□□□□□ -2.61
RNU4-55P-201ENST00000410731 TRDV1A0A1B0GX56 115 aa-1.28□□□□□ -2.61
RNU4-55P-201ENST00000410731 GABARAPH6UMI1 98 aa-1.28□□□□□ -2.61
RNU4-55P-201ENST00000410731 J3KT08 172 aa-1.28□□□□□ -2.61
RNU4-55P-201ENST00000410731 PGRMC1O00264 195 aaKnown RBP-1.28□□□□□ -2.61
RNU4-55P-201ENST00000410731 HBDP02042 147 aa-1.28□□□□□ -2.61
RNU4-55P-201ENST00000410731 MT1AP04731 61 aa-1.28□□□□□ -2.61
RNU4-55P-201ENST00000410731 S100A6P06703 90 aa-1.28□□□□□ -2.61
RNU4-55P-201ENST00000410731 CRYGSP22914 178 aa-1.28□□□□□ -2.61
RNU4-55P-201ENST00000410731 SRP9P49458 86 aaKnown RBP-1.28□□□□□ -2.61
RNU4-55P-201ENST00000410731 PCBD1P61457 104 aa-1.28□□□□□ -2.61
RNU4-55P-201ENST00000410731 SS18L2Q9UHA2 77 aa-1.28□□□□□ -2.61
RNU4-55P-201ENST00000410731 ERG28Q9UKR5 140 aa-1.28□□□□□ -2.61
RNU4-55P-201ENST00000410731 CAMSAP1Q5T5Y3 1602 aa-1.29□□□□□ -2.62
RNU4-55P-201ENST00000410731 TECPR2O15040 1411 aa-1.29□□□□□ -2.62
RNU4-55P-201ENST00000410731 IBTKQ9P2D0 1353 aaPredicted RBP-1.29□□□□□ -2.62
RNU4-55P-201ENST00000410731 TRAV12-3A0A0B4J271 114 aa-1.29□□□□□ -2.62
RNU4-55P-201ENST00000410731 PPP5D1E7EU14 171 aa-1.29□□□□□ -2.62
RNU4-55P-201ENST00000410731 H3BMG7 143 aa-1.29□□□□□ -2.62
RNU4-55P-201ENST00000410731 CRYBA4P53673 196 aa-1.29□□□□□ -2.62
RNU4-55P-201ENST00000410731 BASP1P80723 227 aaKnown RBP-1.29□□□□□ -2.62
RNU4-55P-201ENST00000410731 MRPS15P82914 257 aaKnown RBP-1.29□□□□□ -2.62
RNU4-55P-201ENST00000410731 REEP5Q00765 189 aa-1.29□□□□□ -2.62
RNU4-55P-201ENST00000410731 DHRS4L2Q6PKH6 230 aa-1.29□□□□□ -2.62
RNU4-55P-201ENST00000410731 BAGE3Q86Y29 109 aa-1.29□□□□□ -2.62
RNU4-55P-201ENST00000410731 GINS3Q9BRX5 216 aa-1.29□□□□□ -2.62
RNU4-55P-201ENST00000410731 DOCK1Q14185 1865 aa-1.29□□□□□ -2.62
RNU4-55P-201ENST00000410731 XIRP1Q702N8 1843 aaKnown RBP-1.29□□□□□ -2.62
RNU4-55P-201ENST00000410731 CASKIN1Q8WXD9 1431 aa-1.3□□□□□ -2.62
RNU4-55P-201ENST00000410731 FAM92AA1XBS5 289 aa-1.3□□□□□ -2.62
RNU4-55P-201ENST00000410731 SMIM6P0DI80 62 aa-1.3□□□□□ -2.62
RNU4-55P-201ENST00000410731 PLGLB1Q02325 96 aa-1.3□□□□□ -2.62
RNU4-55P-201ENST00000410731 DYNLRB2Q8TF09 96 aa-1.3□□□□□ -2.62
RNU4-55P-201ENST00000410731 DMXL1Q9Y485 3027 aa-1.3□□□□□ -2.62
RNU4-55P-201ENST00000410731 DSPP15924 2871 aaKnown RBP-1.3□□□□□ -2.62
RNU4-55P-201ENST00000410731 WDR87Q6ZQQ6 2873 aa-1.3□□□□□ -2.62
RNU4-55P-201ENST00000410731 FER1L6Q2WGJ9 1857 aa-1.31□□□□□ -2.62
RNU4-55P-201ENST00000410731 CCDC168Q8NDH2 2452 aa-1.31□□□□□ -2.62
RNU4-55P-201ENST00000410731 KDM5AP29375 1690 aaKnown RBP-1.31□□□□□ -2.62
RNU4-55P-201ENST00000410731 H0YJX3 145 aa-1.31□□□□□ -2.62
RNU4-55P-201ENST00000410731 TMED2Q15363 201 aa-1.31□□□□□ -2.62
RNU4-55P-201ENST00000410731 DEFB123Q8N688 67 aa-1.31□□□□□ -2.62
RNU4-55P-201ENST00000410731 OR13C6PQ8NH95 151 aa-1.31□□□□□ -2.62
RNU4-55P-201ENST00000410731 METTL1Q9UBP6 276 aaKnown RBP-1.31□□□□□ -2.62
RNU4-55P-201ENST00000410731 MYH3P11055 1940 aa-1.31□□□□□ -2.62
RNU4-55P-201ENST00000410731 REV3LO60673 3130 aa-1.32□□□□□ -2.62
RNU4-55P-201ENST00000410731 TRBV7-6A0A0J9YX20 115 aa-1.32□□□□□ -2.62
RNU4-55P-201ENST00000410731 CLPSL1A2RUU4 121 aa-1.32□□□□□ -2.62
RNU4-55P-201ENST00000410731 M0QZK8 103 aa-1.32□□□□□ -2.62
RNU4-55P-201ENST00000410731 IFNA1P01562 189 aa-1.32□□□□□ -2.62
RNU4-55P-201ENST00000410731 S100A11P31949 105 aa-1.32□□□□□ -2.62
RNU4-55P-201ENST00000410731 HSD17B12Q53GQ0 312 aa-1.32□□□□□ -2.62
RNU4-55P-201ENST00000410731 TMEM91Q6ZNR0 172 aa-1.32□□□□□ -2.62
RNU4-55P-201ENST00000410731 SNX29P2Q8IUI4 249 aa-1.32□□□□□ -2.62
RNU4-55P-201ENST00000410731 AGPAT4-IT1Q9H0P7 198 aa-1.32□□□□□ -2.62
RNU4-55P-201ENST00000410731 CBLN4Q9NTU7 201 aa-1.32□□□□□ -2.62
RNU4-55P-201ENST00000410731 UFC1Q9Y3C8 167 aa-1.32□□□□□ -2.62
RNU4-55P-201ENST00000410731 LRRK2Q5S007 2527 aa-1.32□□□□□ -2.62
RNU4-55P-201ENST00000410731 DYNC1H1Q14204 4646 aaKnown RBP-1.32□□□□□ -2.62
RNU4-55P-201ENST00000410731 NSD3Q9BZ95 1437 aa-1.32□□□□□ -2.62
RNU4-55P-201ENST00000410731 KALRNO60229 2985 aa-1.32□□□□□ -2.62
RNU4-55P-201ENST00000410731 FAM186AA6NE01 2351 aa-1.33□□□□□ -2.62
RNU4-55P-201ENST00000410731 CCDC179H3BU77 68 aa-1.33□□□□□ -2.62
RNU4-55P-201ENST00000410731 UQCRQO14949 82 aa-1.33□□□□□ -2.62
RNU4-55P-201ENST00000410731 SLC25A5P05141 298 aaKnown RBP-1.33□□□□□ -2.62
RNU4-55P-201ENST00000410731 HSD11B1P28845 292 aa-1.33□□□□□ -2.62
RNU4-55P-201ENST00000410731 STX19Q8N4C7 294 aa-1.33□□□□□ -2.62
RNU4-55P-201ENST00000410731 MAFIPQ8WZ33 124 aa-1.33□□□□□ -2.62
RNU4-55P-201ENST00000410731 CEP19Q96LK0 163 aa-1.33□□□□□ -2.62
RNU4-55P-201ENST00000410731 SLC35B3Q9H1N7 401 aa-1.33□□□□□ -2.62
Retrieved 100 of 20,778 RNA–protein pairs in 66.8 ms