RNA–Protein interactions for RNA: ENST00000409672.5

SCN9A-203, Transcript of sodium voltage-gated channel alpha subunit 9, humanhuman

APPRIS P2 TSL 5 BASIC

Gene SCN9A, Length 9,768 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN9A-203ENST00000409672 IGLC7A0M8Q6 106 aa6.47□□□□□ -1.37
SCN9A-203ENST00000409672 ABCA2Q9BZC7 2435 aa6.47□□□□□ -1.37
SCN9A-203ENST00000409672 IGLV2-11P01706 119 aa6.47□□□□□ -1.37
SCN9A-203ENST00000409672 FNDC10F2Z333 226 aa6.47□□□□□ -1.37
SCN9A-203ENST00000409672 ETDBQ3ZM63 59 aa6.47□□□□□ -1.37
SCN9A-203ENST00000409672 ZNF664Q8N3J9 261 aa6.47□□□□□ -1.37
SCN9A-203ENST00000409672 NTN5Q8WTR8 489 aaPredicted RBP6.47□□□□□ -1.37
SCN9A-203ENST00000409672 DIRC1Q969H9 104 aa6.47□□□□□ -1.37
SCN9A-203ENST00000409672 AGRNO00468 2067 aa6.47□□□□□ -1.37
SCN9A-203ENST00000409672 NAV3Q8IVL0 2385 aa6.47□□□□□ -1.37
SCN9A-203ENST00000409672 IGLC2P0DOY2 106 aa6.46□□□□□ -1.37
SCN9A-203ENST00000409672 IGLC3P0DOY3 106 aa6.46□□□□□ -1.37
SCN9A-203ENST00000409672 MP68P56378 58 aa6.46□□□□□ -1.37
SCN9A-203ENST00000409672 OXLD1Q5BKU9 147 aa6.46□□□□□ -1.37
SCN9A-203ENST00000409672 H3BUA1 57 aa6.46□□□□□ -1.37
SCN9A-203ENST00000409672 MUSTN1Q8IVN3 82 aa6.46□□□□□ -1.37
SCN9A-203ENST00000409672 ZNF726P1Q15940 193 aa6.46□□□□□ -1.38
SCN9A-203ENST00000409672 NDUFA11Q86Y39 141 aa6.46□□□□□ -1.38
SCN9A-203ENST00000409672 MLST8Q9BVC4 326 aa6.46□□□□□ -1.38
SCN9A-203ENST00000409672 IGKV2-28A0A075B6P5 120 aa6.46□□□□□ -1.38
SCN9A-203ENST00000409672 IGKV2D-28P01615 120 aa6.46□□□□□ -1.38
SCN9A-203ENST00000409672 PRORYQ9H606 182 aa6.46□□□□□ -1.38
SCN9A-203ENST00000409672 SMIM27A0A1W2PRY6 76 aa6.46□□□□□ -1.38
SCN9A-203ENST00000409672 FHL1Q13642 323 aa6.46□□□□□ -1.38
SCN9A-203ENST00000409672 SH2D6Q7Z4S9 175 aa6.46□□□□□ -1.38
SCN9A-203ENST00000409672 WFDC10AQ9H1F0 79 aa6.46□□□□□ -1.38
SCN9A-203ENST00000409672 A0A0J9YXV3 536 aa6.46□□□□□ -1.38
SCN9A-203ENST00000409672 CLEC2BQ92478 149 aa6.46□□□□□ -1.38
SCN9A-203ENST00000409672 TMEM263Q8WUH6 116 aaKnown RBP6.46□□□□□ -1.38
SCN9A-203ENST00000409672 LINC01548A6NM66 108 aa6.45□□□□□ -1.38
SCN9A-203ENST00000409672 COLCA2A8K830 154 aa6.45□□□□□ -1.38
SCN9A-203ENST00000409672 MAP6D1Q9H9H5 199 aa6.45□□□□□ -1.38
SCN9A-203ENST00000409672 V9GYV3 84 aa6.45□□□□□ -1.38
SCN9A-203ENST00000409672 TRBV24-1A0A075B6N3 115 aa6.45□□□□□ -1.38
SCN9A-203ENST00000409672 WI2-2373I1.2A0A1W2PRP0 233 aa6.45□□□□□ -1.38
SCN9A-203ENST00000409672 ZNF493Q6ZR52 646 aa6.45□□□□□ -1.38
SCN9A-203ENST00000409672 RPL37AP8A6NKH3 93 aa6.45□□□□□ -1.38
SCN9A-203ENST00000409672 C16orf54Q6UWD8 224 aa6.45□□□□□ -1.38
SCN9A-203ENST00000409672 MIR7-3HGQ8N6C7 128 aa6.45□□□□□ -1.38
SCN9A-203ENST00000409672 NANOS2P60321 138 aaKnown RBP6.45□□□□□ -1.38
SCN9A-203ENST00000409672 HERV-K104P63124 156 aa6.45□□□□□ -1.38
SCN9A-203ENST00000409672 K7EN84 100 aa6.45□□□□□ -1.38
SCN9A-203ENST00000409672 LINC00311Q8N616 119 aa6.45□□□□□ -1.38
SCN9A-203ENST00000409672 POLR3KQ9Y2Y1 108 aaPredicted RBP6.45□□□□□ -1.38
SCN9A-203ENST00000409672 LOC105371267A0A1B0GV96 52 aa6.45□□□□□ -1.38
SCN9A-203ENST00000409672 C10orf99Q6UWK7 81 aa6.44□□□□□ -1.38
SCN9A-203ENST00000409672 TMEM14CQ9P0S9 112 aa6.44□□□□□ -1.38
SCN9A-203ENST00000409672 SPTSSBQ8NFR3 76 aa6.44□□□□□ -1.38
SCN9A-203ENST00000409672 Q6ZTI0 123 aa6.44□□□□□ -1.38
SCN9A-203ENST00000409672 C18orf65Q6ZTR6 163 aa6.44□□□□□ -1.38
SCN9A-203ENST00000409672 UBE2V1Q13404 147 aa6.44□□□□□ -1.38
SCN9A-203ENST00000409672 C9orf118A6NHY6 69 aa6.44□□□□□ -1.38
SCN9A-203ENST00000409672 PRM2P04554 102 aa6.44□□□□□ -1.38
SCN9A-203ENST00000409672 FGF23Q9GZV9 251 aaPredicted RBP6.44□□□□□ -1.38
SCN9A-203ENST00000409672 C9JQL5 133 aa6.43□□□□□ -1.38
SCN9A-203ENST00000409672 XAGE1AQ9HD64 81 aa6.43□□□□□ -1.38
SCN9A-203ENST00000409672 TRAV1-1A0A0B4J248 108 aa6.43□□□□□ -1.38
SCN9A-203ENST00000409672 BDP1A6H8Y1 2624 aa6.43□□□□□ -1.38
SCN9A-203ENST00000409672 HIVEP3Q5T1R4 2406 aa6.43□□□□□ -1.38
SCN9A-203ENST00000409672 REG3AQ06141 175 aa6.43□□□□□ -1.38
SCN9A-203ENST00000409672 C14orf177Q52M58 125 aa6.43□□□□□ -1.38
SCN9A-203ENST00000409672 PRO0255Q9UI72 69 aa6.43□□□□□ -1.38
SCN9A-203ENST00000409672 LYPD6Q86Y78 171 aa6.43□□□□□ -1.38
SCN9A-203ENST00000409672 TMEM190Q8WZ59 177 aa6.43□□□□□ -1.38
SCN9A-203ENST00000409672 TRBV10-2A0A0K0K1G8 114 aa6.43□□□□□ -1.38
SCN9A-203ENST00000409672 PRSS47A8MTI9 375 aa6.43□□□□□ -1.38
SCN9A-203ENST00000409672 UBE2D2P62837 147 aa6.43□□□□□ -1.38
SCN9A-203ENST00000409672 C12orf74Q32Q52 190 aa6.43□□□□□ -1.38
SCN9A-203ENST00000409672 FAM236DA0A1B0GTK5 79 aa6.43□□□□□ -1.38
SCN9A-203ENST00000409672 FAM236CP0DP71 79 aa6.43□□□□□ -1.38
SCN9A-203ENST00000409672 FOXL2NBQ6ZUU3 175 aa6.43□□□□□ -1.38
SCN9A-203ENST00000409672 Q0VG73 95 aa6.43□□□□□ -1.38
SCN9A-203ENST00000409672 Q8N7P7 452 aa6.43□□□□□ -1.38
SCN9A-203ENST00000409672 C20orf78Q9BR46 151 aa6.43□□□□□ -1.38
SCN9A-203ENST00000409672 TEX49A0A1B0GTD5 131 aa6.43□□□□□ -1.38
SCN9A-203ENST00000409672 C11orf53Q8IXP5 236 aa6.42□□□□□ -1.38
SCN9A-203ENST00000409672 E7EUB6 86 aa6.42□□□□□ -1.38
SCN9A-203ENST00000409672 PSMB8P28062 276 aa6.42□□□□□ -1.38
SCN9A-203ENST00000409672 K7EIM0 57 aa6.42□□□□□ -1.38
SCN9A-203ENST00000409672 CFPP27918 469 aa6.42□□□□□ -1.38
SCN9A-203ENST00000409672 RSPO1Q2MKA7 263 aaPredicted RBP6.42□□□□□ -1.38
SCN9A-203ENST00000409672 Q6ZVH6 145 aa6.42□□□□□ -1.38
SCN9A-203ENST00000409672 KAAG1Q9UBP8 84 aa6.42□□□□□ -1.38
SCN9A-203ENST00000409672 CIRBP-AS1Q8TBR5 109 aa6.42□□□□□ -1.38
SCN9A-203ENST00000409672 SPANXA1Q9NS26 97 aa6.42□□□□□ -1.38
SCN9A-203ENST00000409672 SLPIP03973 132 aa6.42□□□□□ -1.38
SCN9A-203ENST00000409672 Q6ZUT4 128 aa6.42□□□□□ -1.38
SCN9A-203ENST00000409672 A0A1W2PNU3 283 aaPredicted RBP6.41□□□□□ -1.38
SCN9A-203ENST00000409672 A0A1W2PPM0 123 aa6.41□□□□□ -1.38
SCN9A-203ENST00000409672 A4D1N5 150 aa6.41□□□□□ -1.38
SCN9A-203ENST00000409672 PPDPFLQ8WWR9 84 aa6.41□□□□□ -1.38
SCN9A-203ENST00000409672 I3L2K1 104 aa6.41□□□□□ -1.38
SCN9A-203ENST00000409672 PYY3Q5JQD4 70 aa6.41□□□□□ -1.38
SCN9A-203ENST00000409672 SHISA2Q6UWI4 295 aa6.41□□□□□ -1.38
SCN9A-203ENST00000409672 Q8NA96 180 aa6.41□□□□□ -1.38
SCN9A-203ENST00000409672 IGLV11-55A0A075B6I3 123 aa6.41□□□□□ -1.38
SCN9A-203ENST00000409672 CFC1BP0CG36 223 aa6.41□□□□□ -1.38
SCN9A-203ENST00000409672 CFC1P0CG37 223 aa6.41□□□□□ -1.38
SCN9A-203ENST00000409672 COX8AP10176 69 aa6.41□□□□□ -1.38
SCN9A-203ENST00000409672 PLA2G2AP14555 144 aa6.41□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 103.2 ms