RNA–Protein interactions for RNA: ENST00000406327.2

HMGB3P18-201, Transcript of high mobility group box 3 pseudogene 18, humanhuman

BASIC

Gene HMGB3P18, Length 590 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P18-201ENST00000406327 ZFP30Q9Y2G7 519 aa2.72□□□□□ -1.97
HMGB3P18-201ENST00000406327 GVINP1Q7Z2Y8 2422 aa2.72□□□□□ -1.97
HMGB3P18-201ENST00000406327 URB1O60287 2271 aaKnown RBP2.71□□□□□ -1.98
HMGB3P18-201ENST00000406327 BOD1L1Q8NFC6 3051 aa2.71□□□□□ -1.98
HMGB3P18-201ENST00000406327 DMXL2Q8TDJ6 3036 aa2.71□□□□□ -1.98
HMGB3P18-201ENST00000406327 TRAV8-1A0A0A6YYK1 113 aa2.71□□□□□ -1.98
HMGB3P18-201ENST00000406327 OR2T8A6NH00 312 aa2.71□□□□□ -1.98
HMGB3P18-201ENST00000406327 HIGD1CA8MV81 97 aa2.71□□□□□ -1.98
HMGB3P18-201ENST00000406327 A8MWP6 167 aa2.71□□□□□ -1.98
HMGB3P18-201ENST00000406327 F2Z2F3 143 aa2.71□□□□□ -1.98
HMGB3P18-201ENST00000406327 TSTD3H0UI37 97 aa2.71□□□□□ -1.98
HMGB3P18-201ENST00000406327 GPX1P07203 203 aa2.71□□□□□ -1.98
HMGB3P18-201ENST00000406327 RPL7P18124 248 aaKnown RBP2.71□□□□□ -1.98
HMGB3P18-201ENST00000406327 DDTP30046 118 aa2.71□□□□□ -1.98
HMGB3P18-201ENST00000406327 SRIP30626 198 aa2.71□□□□□ -1.98
HMGB3P18-201ENST00000406327 S100A7P31151 101 aa2.71□□□□□ -1.98
HMGB3P18-201ENST00000406327 FOXA3P55318 350 aaPredicted RBP2.71□□□□□ -1.98
HMGB3P18-201ENST00000406327 PSG9Q00887 426 aa2.71□□□□□ -1.98
HMGB3P18-201ENST00000406327 IQCJQ1A5X6 159 aa2.71□□□□□ -1.98
HMGB3P18-201ENST00000406327 GDF5OSQ5U4N7 250 aa2.71□□□□□ -1.98
HMGB3P18-201ENST00000406327 IGFL1Q6UW32 110 aa2.71□□□□□ -1.98
HMGB3P18-201ENST00000406327 UNQ5815/PRO19632Q6UWF5 114 aa2.71□□□□□ -1.98
HMGB3P18-201ENST00000406327 GOLT1AQ6ZVE7 132 aa2.71□□□□□ -1.98
HMGB3P18-201ENST00000406327 ATP5L2Q7Z4Y8 100 aa2.71□□□□□ -1.98
HMGB3P18-201ENST00000406327 Q86TA4 180 aa2.71□□□□□ -1.98
HMGB3P18-201ENST00000406327 C5orf56Q8N8D9 126 aa2.71□□□□□ -1.98
HMGB3P18-201ENST00000406327 TMEM75Q8N9X5 138 aa2.71□□□□□ -1.98
HMGB3P18-201ENST00000406327 OR4B1Q8NGF8 309 aa2.71□□□□□ -1.98
HMGB3P18-201ENST00000406327 C10orf105Q8TEF2 133 aa2.71□□□□□ -1.98
HMGB3P18-201ENST00000406327 PRO1933Q9H354 126 aa2.71□□□□□ -1.98
HMGB3P18-201ENST00000406327 NAGKQ9UJ70 344 aa2.71□□□□□ -1.98
HMGB3P18-201ENST00000406327 SOX21Q9Y651 276 aaPredicted RBP2.71□□□□□ -1.98
HMGB3P18-201ENST00000406327 MUC6Q6W4X9 2439 aa2.71□□□□□ -1.98
HMGB3P18-201ENST00000406327 PRRC2CQ9Y520 2896 aaKnown RBP2.71□□□□□ -1.98
HMGB3P18-201ENST00000406327 CADP27708 2225 aa2.7□□□□□ -1.98
HMGB3P18-201ENST00000406327 CNOT1A5YKK6 2376 aaKnown RBP2.7□□□□□ -1.98
HMGB3P18-201ENST00000406327 TRBV7-1A0A0A6YYK4 115 aa2.7□□□□□ -1.98
HMGB3P18-201ENST00000406327 G3V318 75 aa2.7□□□□□ -1.98
HMGB3P18-201ENST00000406327 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP2.7□□□□□ -1.98
HMGB3P18-201ENST00000406327 M0R3E3 92 aa2.7□□□□□ -1.98
HMGB3P18-201ENST00000406327 IGHV1-69P01742 117 aa2.7□□□□□ -1.98
HMGB3P18-201ENST00000406327 CSN1S1P47710 185 aa2.7□□□□□ -1.98
HMGB3P18-201ENST00000406327 CRIP1P50238 77 aa2.7□□□□□ -1.98
HMGB3P18-201ENST00000406327 MP68P56378 58 aa2.7□□□□□ -1.98
HMGB3P18-201ENST00000406327 RBX1P62877 108 aa2.7□□□□□ -1.98
HMGB3P18-201ENST00000406327 HBBP68871 147 aa2.7□□□□□ -1.98
HMGB3P18-201ENST00000406327 RHOGP84095 191 aa2.7□□□□□ -1.98
HMGB3P18-201ENST00000406327 DEFA6Q01524 100 aa2.7□□□□□ -1.98
HMGB3P18-201ENST00000406327 LY6EQ16553 131 aa2.7□□□□□ -1.98
HMGB3P18-201ENST00000406327 SAPCD1Q5SSQ6 148 aa2.7□□□□□ -1.98
HMGB3P18-201ENST00000406327 C1orf194Q5T5A4 169 aa2.7□□□□□ -1.98
HMGB3P18-201ENST00000406327 TOMM20LQ6UXN7 152 aa2.7□□□□□ -1.98
HMGB3P18-201ENST00000406327 TCF24Q7RTU0 167 aa2.7□□□□□ -1.98
HMGB3P18-201ENST00000406327 C3orf22Q8N5N4 141 aa2.7□□□□□ -1.98
HMGB3P18-201ENST00000406327 SIGLECL1Q8N7X8 197 aa2.7□□□□□ -1.98
HMGB3P18-201ENST00000406327 OR2D3Q8NGH3 330 aa2.7□□□□□ -1.98
HMGB3P18-201ENST00000406327 OR2K2Q8NGT1 345 aa2.7□□□□□ -1.98
HMGB3P18-201ENST00000406327 C18orf32Q8TCD1 76 aa2.7□□□□□ -1.98
HMGB3P18-201ENST00000406327 ZC2HC1AQ96GY0 325 aa2.7□□□□□ -1.98
HMGB3P18-201ENST00000406327 C14orf144Q96I85 54 aa2.7□□□□□ -1.98
HMGB3P18-201ENST00000406327 CCL19Q99731 98 aa2.7□□□□□ -1.98
HMGB3P18-201ENST00000406327 RABAC1Q9UI14 185 aa2.7□□□□□ -1.98
HMGB3P18-201ENST00000406327 RIF1Q5UIP0 2472 aaKnown RBP2.7□□□□□ -1.98
HMGB3P18-201ENST00000406327 SVILO95425 2214 aa2.7□□□□□ -1.98
HMGB3P18-201ENST00000406327 NBEAQ8NFP9 2946 aa2.7□□□□□ -1.98
HMGB3P18-201ENST00000406327 CACNA1DQ01668 2161 aa2.7□□□□□ -1.98
HMGB3P18-201ENST00000406327 HEATR1Q9H583 2144 aaKnown RBP2.69□□□□□ -1.98
HMGB3P18-201ENST00000406327 USF3Q68DE3 2245 aa2.69□□□□□ -1.98
HMGB3P18-201ENST00000406327 APC2O95996 2303 aa2.69□□□□□ -1.98
HMGB3P18-201ENST00000406327 CEP250Q9BV73 2442 aa2.69□□□□□ -1.98
HMGB3P18-201ENST00000406327 ATMQ13315 3056 aa2.69□□□□□ -1.98
HMGB3P18-201ENST00000406327 A0A1B0GUT8 65 aa2.69□□□□□ -1.98
HMGB3P18-201ENST00000406327 CLPSL1A2RUU4 121 aa2.69□□□□□ -1.98
HMGB3P18-201ENST00000406327 ZNF705FA8MVS1 300 aaPredicted RBP2.69□□□□□ -1.98
HMGB3P18-201ENST00000406327 ZNF705DP0CH99 300 aaPredicted RBP2.69□□□□□ -1.98
HMGB3P18-201ENST00000406327 ZNF705BP0CI00 300 aaPredicted RBP2.69□□□□□ -1.98
HMGB3P18-201ENST00000406327 KPRPQ5T749 579 aaPredicted RBP2.69□□□□□ -1.98
HMGB3P18-201ENST00000406327 Q6AWC8 147 aa2.69□□□□□ -1.98
HMGB3P18-201ENST00000406327 NIT1Q86X76 327 aa2.69□□□□□ -1.98
HMGB3P18-201ENST00000406327 FER1L6-AS1Q8NA97 138 aa2.69□□□□□ -1.98
HMGB3P18-201ENST00000406327 ZFHX4Q86UP3 3567 aa2.69□□□□□ -1.98
HMGB3P18-201ENST00000406327 ANKRD11Q6UB99 2663 aaPredicted RBP2.69□□□□□ -1.98
HMGB3P18-201ENST00000406327 PTPRZ1P23471 2315 aaPredicted RBP2.69□□□□□ -1.98
HMGB3P18-201ENST00000406327 ASPMQ8IZT6 3477 aa2.69□□□□□ -1.98
HMGB3P18-201ENST00000406327 TANC2Q9HCD6 1990 aa2.69□□□□□ -1.98
HMGB3P18-201ENST00000406327 KALRNO60229 2985 aa2.68□□□□□ -1.98
HMGB3P18-201ENST00000406327 IGKV2-40A0A087WW87 121 aaPredicted RBP2.68□□□□□ -1.98
HMGB3P18-201ENST00000406327 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP2.68□□□□□ -1.98
HMGB3P18-201ENST00000406327 TRAV41A0A0B4J266 112 aa2.68□□□□□ -1.98
HMGB3P18-201ENST00000406327 TMEM189A5PLL7 270 aa2.68□□□□□ -1.98
HMGB3P18-201ENST00000406327 RBAKDNA6NC62 111 aa2.68□□□□□ -1.98
HMGB3P18-201ENST00000406327 FAM223BA6NKX1 122 aa2.68□□□□□ -1.98
HMGB3P18-201ENST00000406327 B4DSR2 109 aa2.68□□□□□ -1.98
HMGB3P18-201ENST00000406327 SH2D1AO60880 128 aa2.68□□□□□ -1.98
HMGB3P18-201ENST00000406327 IGKV2D-40P01614 121 aaPredicted RBP2.68□□□□□ -1.98
HMGB3P18-201ENST00000406327 MSMBP08118 114 aa2.68□□□□□ -1.98
HMGB3P18-201ENST00000406327 ARMS2P0C7Q2 107 aa2.68□□□□□ -1.98
HMGB3P18-201ENST00000406327 LINC00614P0C842 121 aa2.68□□□□□ -1.98
HMGB3P18-201ENST00000406327 C3orf79P0CE67 100 aa2.68□□□□□ -1.98
HMGB3P18-201ENST00000406327 PRB4P10163 310 aaPredicted RBP2.68□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 67.1 ms