RNA–Protein interactions for RNA: ENST00000406072.5

HDAC9-203, Transcript of histone deacetylase 9, humanhuman

TSL 5 BASIC

Gene HDAC9, Length 4,102 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-203ENST00000406072 ZNF80P51504 273 aaPredicted RBP4.5□□□□□ -1.69
HDAC9-203ENST00000406072 MYO15AQ9UKN7 3530 aa4.5□□□□□ -1.69
HDAC9-203ENST00000406072 F6UB75 175 aa4.49□□□□□ -1.69
HDAC9-203ENST00000406072 NEXN-AS1Q8NBZ9 246 aa4.49□□□□□ -1.69
HDAC9-203ENST00000406072 RNASE6Q93091 150 aaKnown RBP4.49□□□□□ -1.69
HDAC9-203ENST00000406072 U3KQK5 164 aa4.49□□□□□ -1.69
HDAC9-203ENST00000406072 TRBV30A0A0K0K1B3 111 aa4.49□□□□□ -1.69
HDAC9-203ENST00000406072 USP17L23D6RBM5 183 aa4.49□□□□□ -1.69
HDAC9-203ENST00000406072 PRB2P02812 416 aaPredicted RBP4.49□□□□□ -1.69
HDAC9-203ENST00000406072 RPL18AQ02543 176 aaKnown RBP4.49□□□□□ -1.69
HDAC9-203ENST00000406072 BSPH1Q075Z2 132 aa4.49□□□□□ -1.69
HDAC9-203ENST00000406072 MRPL55Q7Z7F7 128 aaKnown RBP4.49□□□□□ -1.69
HDAC9-203ENST00000406072 OPRPNQ99935 248 aaPredicted RBP4.49□□□□□ -1.69
HDAC9-203ENST00000406072 A0A096LNJ9 63 aa4.49□□□□□ -1.69
HDAC9-203ENST00000406072 TRBV6-1A0A0K0K1D8 114 aa4.49□□□□□ -1.69
HDAC9-203ENST00000406072 PRAC2D3DTV9 90 aa4.49□□□□□ -1.69
HDAC9-203ENST00000406072 GAS8-AS1O95177 125 aa4.49□□□□□ -1.69
HDAC9-203ENST00000406072 IGHV3-30P01768 117 aa4.49□□□□□ -1.69
HDAC9-203ENST00000406072 IGHV3-30-5P0DP03 117 aa4.49□□□□□ -1.69
HDAC9-203ENST00000406072 RPL35AP18077 110 aaKnown RBP4.49□□□□□ -1.69
HDAC9-203ENST00000406072 UBE2D1P51668 147 aa4.49□□□□□ -1.69
HDAC9-203ENST00000406072 UBE2D3P61077 147 aa4.49□□□□□ -1.69
HDAC9-203ENST00000406072 UBE2D2P62837 147 aa4.49□□□□□ -1.69
HDAC9-203ENST00000406072 TMEM178BH3BS89 294 aa4.48□□□□□ -1.69
HDAC9-203ENST00000406072 IGHV3-30-3P0DP02 117 aa4.48□□□□□ -1.69
HDAC9-203ENST00000406072 MYCNOSP40205 109 aa4.48□□□□□ -1.69
HDAC9-203ENST00000406072 SMCPP49901 116 aaPredicted RBP4.48□□□□□ -1.69
HDAC9-203ENST00000406072 Q6ZS46 218 aa4.48□□□□□ -1.69
HDAC9-203ENST00000406072 IGHV3-38A0A0C4DH36 116 aa4.48□□□□□ -1.69
HDAC9-203ENST00000406072 WISP2O76076 250 aa4.48□□□□□ -1.69
HDAC9-203ENST00000406072 MALP21145 153 aa4.48□□□□□ -1.69
HDAC9-203ENST00000406072 DAD1P61803 113 aa4.48□□□□□ -1.69
HDAC9-203ENST00000406072 DAZAP2Q15038 168 aaPredicted RBP4.48□□□□□ -1.69
HDAC9-203ENST00000406072 ORMDL1Q9P0S3 153 aa4.48□□□□□ -1.69
HDAC9-203ENST00000406072 PRO0461Q9UI25 63 aa4.48□□□□□ -1.69
HDAC9-203ENST00000406072 IGHV1OR15-1A0A075B7D0 117 aa4.48□□□□□ -1.69
HDAC9-203ENST00000406072 A0A0J9YXY3 114 aa4.48□□□□□ -1.69
HDAC9-203ENST00000406072 H7C423 109 aa4.48□□□□□ -1.69
HDAC9-203ENST00000406072 TIMM17AQ99595 171 aa4.48□□□□□ -1.69
HDAC9-203ENST00000406072 MDFICQ9P1T7 246 aa4.48□□□□□ -1.69
HDAC9-203ENST00000406072 SONP18583 2426 aaKnown RBP4.48□□□□□ -1.69
HDAC9-203ENST00000406072 MYO9AB2RTY4 2548 aa4.48□□□□□ -1.69
HDAC9-203ENST00000406072 LINC01619G3V211 115 aa4.48□□□□□ -1.69
HDAC9-203ENST00000406072 SEC61GP60059 68 aa4.48□□□□□ -1.69
HDAC9-203ENST00000406072 ADORA2A-AS1P86434 159 aa4.48□□□□□ -1.69
HDAC9-203ENST00000406072 RNF185Q96GF1 192 aa4.48□□□□□ -1.69
HDAC9-203ENST00000406072 CSPG4Q6UVK1 2322 aa4.47□□□□□ -1.69
HDAC9-203ENST00000406072 LAMA1P25391 3075 aa4.47□□□□□ -1.69
HDAC9-203ENST00000406072 NDUFC2-KCTD14E9PQ53 114 aa4.47□□□□□ -1.69
HDAC9-203ENST00000406072 I3L2K1 104 aa4.47□□□□□ -1.69
HDAC9-203ENST00000406072 LECT2O14960 151 aa4.47□□□□□ -1.69
HDAC9-203ENST00000406072 EIF4EBP1Q13541 118 aaPredicted RBP4.47□□□□□ -1.69
HDAC9-203ENST00000406072 RITA1Q96K30 269 aa4.47□□□□□ -1.69
HDAC9-203ENST00000406072 FAM240AA0A1B0GVK7 77 aa4.47□□□□□ -1.69
HDAC9-203ENST00000406072 K7EIM0 57 aa4.47□□□□□ -1.69
HDAC9-203ENST00000406072 NXPH4O95158 308 aa4.47□□□□□ -1.69
HDAC9-203ENST00000406072 SUMO4Q6EEV6 95 aa4.47□□□□□ -1.69
HDAC9-203ENST00000406072 SIRPDQ9H106 197 aa4.47□□□□□ -1.69
HDAC9-203ENST00000406072 C7orf69Q9H7B7 122 aa4.47□□□□□ -1.69
HDAC9-203ENST00000406072 ZNF462Q96JM2 2506 aa4.47□□□□□ -1.69
HDAC9-203ENST00000406072 TRGV2A0A075B6R0 118 aa4.47□□□□□ -1.69
HDAC9-203ENST00000406072 LHBP01229 141 aa4.47□□□□□ -1.69
HDAC9-203ENST00000406072 ITLN2Q8WWU7 325 aaPredicted RBP4.47□□□□□ -1.69
HDAC9-203ENST00000406072 RHPN1-AS1Q9BWJ2 59 aa4.47□□□□□ -1.69
HDAC9-203ENST00000406072 KLK9Q9UKQ9 250 aa4.47□□□□□ -1.69
HDAC9-203ENST00000406072 H0YGX0 51 aa4.46□□□□□ -1.69
HDAC9-203ENST00000406072 COX7A2LO14548 114 aa4.46□□□□□ -1.69
HDAC9-203ENST00000406072 TMEM61Q8N0U2 210 aa4.46□□□□□ -1.69
HDAC9-203ENST00000406072 LINC00574Q9H8X3 128 aa4.46□□□□□ -1.69
HDAC9-203ENST00000406072 CACNA1AO00555 2505 aa4.46□□□□□ -1.7
HDAC9-203ENST00000406072 TRBV7-1A0A0A6YYK4 115 aa4.46□□□□□ -1.7
HDAC9-203ENST00000406072 IGHV3-16A0A0C4DH30 117 aa4.46□□□□□ -1.7
HDAC9-203ENST00000406072 IGLV2-11P01706 119 aa4.46□□□□□ -1.7
HDAC9-203ENST00000406072 C4orf26Q17RF5 130 aa4.46□□□□□ -1.7
HDAC9-203ENST00000406072 C4orf48Q5BLP8 95 aa4.46□□□□□ -1.7
HDAC9-203ENST00000406072 LINC00311Q8N616 119 aa4.46□□□□□ -1.7
HDAC9-203ENST00000406072 FANCD2OSQ96PS1 177 aa4.46□□□□□ -1.7
HDAC9-203ENST00000406072 ZMAT4Q9H898 229 aa4.46□□□□□ -1.7
HDAC9-203ENST00000406072 TRAV12-2A0A075B6T6 113 aa4.46□□□□□ -1.7
HDAC9-203ENST00000406072 CCL21O00585 134 aa4.46□□□□□ -1.7
HDAC9-203ENST00000406072 TNFRSF13BO14836 293 aaPredicted RBP4.46□□□□□ -1.7
HDAC9-203ENST00000406072 TIMM17BO60830 172 aa4.46□□□□□ -1.7
HDAC9-203ENST00000406072 IGHV3-53P01767 116 aa4.46□□□□□ -1.7
HDAC9-203ENST00000406072 MIAQ16674 131 aa4.46□□□□□ -1.7
HDAC9-203ENST00000406072 C1orf229Q6ZS94 237 aaPredicted RBP4.46□□□□□ -1.7
HDAC9-203ENST00000406072 LINC01560Q8TB33 94 aa4.46□□□□□ -1.7
HDAC9-203ENST00000406072 C20orf173Q96LM9 149 aa4.46□□□□□ -1.7
HDAC9-203ENST00000406072 SND1-IT1Q9HBX3 110 aa4.46□□□□□ -1.7
HDAC9-203ENST00000406072 VCANP13611 3396 aa4.46□□□□□ -1.7
HDAC9-203ENST00000406072 IGKV2D-29A0A075B6S2 120 aaPredicted RBP4.45□□□□□ -1.7
HDAC9-203ENST00000406072 IGKV2-29A2NJV5 120 aaPredicted RBP4.45□□□□□ -1.7
HDAC9-203ENST00000406072 F8WDY8 70 aa4.45□□□□□ -1.7
HDAC9-203ENST00000406072 LST1O00453 97 aa4.45□□□□□ -1.7
HDAC9-203ENST00000406072 SPINK13Q1W4C9 94 aa4.45□□□□□ -1.7
HDAC9-203ENST00000406072 PRO0628Q9UI54 55 aa4.45□□□□□ -1.7
HDAC9-203ENST00000406072 TTC28Q96AY4 2481 aa4.45□□□□□ -1.7
HDAC9-203ENST00000406072 SMIM26A0A096LP01 95 aa4.45□□□□□ -1.7
HDAC9-203ENST00000406072 INSP01308 110 aa4.45□□□□□ -1.7
HDAC9-203ENST00000406072 TRBV12-3P01733 135 aa4.45□□□□□ -1.7
HDAC9-203ENST00000406072 ODF3Q96PU9 254 aa4.45□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 69 ms