RNA–Protein interactions for RNA: ENST00000405546.7

ATG4B-206, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 2 BASIC

Gene ATG4B, Length 3,294 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-206ENST00000405546 NACAE9PAV3 2078 aa11.3□□□□□ -0.6
ATG4B-206ENST00000405546 KHDC1LQ5JSQ8 128 aa11.3□□□□□ -0.6
ATG4B-206ENST00000405546 ZFAND2AQ8N6M9 145 aa11.3□□□□□ -0.6
ATG4B-206ENST00000405546 SLC25A20O43772 301 aa11.29□□□□□ -0.6
ATG4B-206ENST00000405546 IGHG2P01859 326 aa11.29□□□□□ -0.6
ATG4B-206ENST00000405546 ELANEP08246 267 aa11.29□□□□□ -0.6
ATG4B-206ENST00000405546 TTC32Q5I0X7 151 aa11.29□□□□□ -0.6
ATG4B-206ENST00000405546 SNCGO76070 127 aa11.29□□□□□ -0.6
ATG4B-206ENST00000405546 NHLRC4P0CG21 123 aaPredicted RBP11.29□□□□□ -0.6
ATG4B-206ENST00000405546 SRSF2Q01130 221 aaKnown RBP11.29□□□□□ -0.6
ATG4B-206ENST00000405546 GPHB5Q86YW7 130 aa11.29□□□□□ -0.6
ATG4B-206ENST00000405546 NEXN-AS1Q8NBZ9 246 aa11.29□□□□□ -0.6
ATG4B-206ENST00000405546 DPH3P1Q9H4G8 78 aa11.29□□□□□ -0.6
ATG4B-206ENST00000405546 TEX49A0A1B0GTD5 131 aa11.28□□□□□ -0.6
ATG4B-206ENST00000405546 B4DSR2 109 aa11.28□□□□□ -0.6
ATG4B-206ENST00000405546 PRB1P04280 392 aa11.28□□□□□ -0.6
ATG4B-206ENST00000405546 MRPL53Q96EL3 112 aaKnown RBP11.28□□□□□ -0.6
ATG4B-206ENST00000405546 ID1P41134 155 aa11.28□□□□□ -0.6
ATG4B-206ENST00000405546 DEFB112Q30KQ8 113 aa11.28□□□□□ -0.6
ATG4B-206ENST00000405546 UBE2D1P51668 147 aa11.27□□□□□ -0.6
ATG4B-206ENST00000405546 A6NDX4 124 aa11.27□□□□□ -0.61
ATG4B-206ENST00000405546 TP53TG1Q9Y2A0 90 aa11.27□□□□□ -0.61
ATG4B-206ENST00000405546 ZNF256Q9Y2P7 627 aaPredicted RBP11.27□□□□□ -0.61
ATG4B-206ENST00000405546 SYNJ2BPP57105 145 aa11.27□□□□□ -0.61
ATG4B-206ENST00000405546 ZNF580Q9UK33 172 aa11.27□□□□□ -0.61
ATG4B-206ENST00000405546 A0A0J9YY99 117 aa11.26□□□□□ -0.61
ATG4B-206ENST00000405546 A4D1N5 150 aa11.26□□□□□ -0.61
ATG4B-206ENST00000405546 UBE2D3P61077 147 aa11.26□□□□□ -0.61
ATG4B-206ENST00000405546 UBE2D2P62837 147 aa11.26□□□□□ -0.61
ATG4B-206ENST00000405546 KLK9Q9UKQ9 250 aa11.26□□□□□ -0.61
ATG4B-206ENST00000405546 HIST2H2BDQ6DRA6 164 aa11.25□□□□□ -0.61
ATG4B-206ENST00000405546 PRSS2P07478 247 aa11.25□□□□□ -0.61
ATG4B-206ENST00000405546 Q6ZSV7 163 aa11.25□□□□□ -0.61
ATG4B-206ENST00000405546 NDUFV3P56181 108 aaKnown RBP11.24□□□□□ -0.61
ATG4B-206ENST00000405546 SPINK13Q1W4C9 94 aa11.24□□□□□ -0.61
ATG4B-206ENST00000405546 ORMDL2Q53FV1 153 aa11.24□□□□□ -0.61
ATG4B-206ENST00000405546 ATP6V0E2Q8NHE4 81 aa11.24□□□□□ -0.61
ATG4B-206ENST00000405546 TOMM6Q96B49 74 aa11.24□□□□□ -0.61
ATG4B-206ENST00000405546 TRBV7-9A0A0J9YWB2 115 aa11.24□□□□□ -0.61
ATG4B-206ENST00000405546 ZNF56Q15929 161 aa11.24□□□□□ -0.61
ATG4B-206ENST00000405546 MTORP42345 2549 aa11.24□□□□□ -0.61
ATG4B-206ENST00000405546 CRYGDP07320 174 aa11.24□□□□□ -0.61
ATG4B-206ENST00000405546 C10orf126Q8N4M7 172 aa11.24□□□□□ -0.61
ATG4B-206ENST00000405546 PRO1854Q9UHT4 67 aa11.24□□□□□ -0.61
ATG4B-206ENST00000405546 TEX15Q9BXT5 2789 aa11.24□□□□□ -0.61
ATG4B-206ENST00000405546 LINC01546A6NGU7 62 aa11.23□□□□□ -0.61
ATG4B-206ENST00000405546 NOTCH2Q04721 2471 aa11.23□□□□□ -0.61
ATG4B-206ENST00000405546 C15orf53Q8NAA6 179 aa11.23□□□□□ -0.61
ATG4B-206ENST00000405546 LENEPQ9Y5L5 61 aa11.23□□□□□ -0.61
ATG4B-206ENST00000405546 RNF223E7ERA6 249 aa11.22□□□□□ -0.61
ATG4B-206ENST00000405546 Q8N1Y9 231 aa11.22□□□□□ -0.61
ATG4B-206ENST00000405546 PSMG3-AS1Q96PY0 264 aa11.22□□□□□ -0.61
ATG4B-206ENST00000405546 GAGE12JA6NER3 117 aa11.22□□□□□ -0.61
ATG4B-206ENST00000405546 GAGE7O76087 117 aa11.22□□□□□ -0.61
ATG4B-206ENST00000405546 GAGE12FP0CL80 117 aa11.22□□□□□ -0.61
ATG4B-206ENST00000405546 GAGE12GP0CL81 117 aa11.22□□□□□ -0.61
ATG4B-206ENST00000405546 GAGE12IP0CL82 117 aa11.22□□□□□ -0.61
ATG4B-206ENST00000405546 SNRPD3P62318 126 aaKnown RBP11.22□□□□□ -0.61
ATG4B-206ENST00000405546 GAGE4Q13068 117 aa11.22□□□□□ -0.61
ATG4B-206ENST00000405546 TSHBP01222 138 aa11.22□□□□□ -0.61
ATG4B-206ENST00000405546 COX6B1P14854 86 aa11.22□□□□□ -0.61
ATG4B-206ENST00000405546 ACANP16112 2415 aa11.21□□□□□ -0.61
ATG4B-206ENST00000405546 IGHV3-73A0A0B4J1V6 119 aa11.21□□□□□ -0.61
ATG4B-206ENST00000405546 TRAV12-1A0A0B4J245 112 aa11.21□□□□□ -0.61
ATG4B-206ENST00000405546 IGHV3-30P01768 117 aa11.21□□□□□ -0.61
ATG4B-206ENST00000405546 IGHV3-30-5P0DP03 117 aa11.21□□□□□ -0.61
ATG4B-206ENST00000405546 RNASE3P12724 160 aaKnown RBP11.21□□□□□ -0.61
ATG4B-206ENST00000405546 LGALS3P17931 250 aaKnown RBP11.21□□□□□ -0.62
ATG4B-206ENST00000405546 DEFB136Q30KP8 78 aa11.21□□□□□ -0.62
ATG4B-206ENST00000405546 RNASE13Q5GAN3 156 aaKnown RBP11.21□□□□□ -0.62
ATG4B-206ENST00000405546 ZNRF2Q8NHG8 242 aa11.21□□□□□ -0.62
ATG4B-206ENST00000405546 DUX3Q96PT4 197 aa11.21□□□□□ -0.62
ATG4B-206ENST00000405546 PRRC2AP48634 2157 aaKnown RBP11.21□□□□□ -0.62
ATG4B-206ENST00000405546 EIF4EBP3O60516 100 aaPredicted RBP11.2□□□□□ -0.62
ATG4B-206ENST00000405546 RPL32P62910 135 aaKnown RBP11.2□□□□□ -0.62
ATG4B-206ENST00000405546 C19orf54Q5BKX5 351 aa11.2□□□□□ -0.62
ATG4B-206ENST00000405546 LYRM7Q5U5X0 104 aa11.2□□□□□ -0.62
ATG4B-206ENST00000405546 SOCS3O14543 225 aa11.2□□□□□ -0.62
ATG4B-206ENST00000405546 HERVK_113P61574 105 aa11.2□□□□□ -0.62
ATG4B-206ENST00000405546 MUSTN1Q8IVN3 82 aa11.2□□□□□ -0.62
ATG4B-206ENST00000405546 MDFICQ9P1T7 246 aa11.2□□□□□ -0.62
ATG4B-206ENST00000405546 IFITM1P13164 125 aa11.2□□□□□ -0.62
ATG4B-206ENST00000405546 CHCHD5Q9BSY4 110 aa11.2□□□□□ -0.62
ATG4B-206ENST00000405546 JMJD1CQ15652 2540 aa11.2□□□□□ -0.62
ATG4B-206ENST00000405546 MXRA5Q9NR99 2828 aa11.19□□□□□ -0.62
ATG4B-206ENST00000405546 IGLV4-69A0A075B6H9 119 aa11.19□□□□□ -0.62
ATG4B-206ENST00000405546 MUC4Q99102 2169 aa11.19□□□□□ -0.62
ATG4B-206ENST00000405546 CITED1Q99966 193 aa11.19□□□□□ -0.62
ATG4B-206ENST00000405546 TRAV8-4A0A0B4J246 113 aa11.18□□□□□ -0.62
ATG4B-206ENST00000405546 H3BUA1 57 aa11.18□□□□□ -0.62
ATG4B-206ENST00000405546 J3QQQ9 107 aa11.18□□□□□ -0.62
ATG4B-206ENST00000405546 MEIG1Q5JSS6 88 aa11.18□□□□□ -0.62
ATG4B-206ENST00000405546 C11orf44Q8N8P7 122 aa11.18□□□□□ -0.62
ATG4B-206ENST00000405546 IGHV4-4A0A075B6R2 117 aa11.18□□□□□ -0.62
ATG4B-206ENST00000405546 IGLV1-40P01703 118 aa11.18□□□□□ -0.62
ATG4B-206ENST00000405546 SDHAF1A6NFY7 115 aa11.17□□□□□ -0.62
ATG4B-206ENST00000405546 TMEM262E9PQX1 116 aa11.17□□□□□ -0.62
ATG4B-206ENST00000405546 RHODO00212 210 aa11.17□□□□□ -0.62
ATG4B-206ENST00000405546 LINC01356Q8N9X3 169 aa11.17□□□□□ -0.62
ATG4B-206ENST00000405546 PRM2P04554 102 aa11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 72.7 ms