RNA–Protein interactions for RNA: ENST00000403136.1

CEACAM1-206, Transcript of carcinoembryonic antigen related cell adhesion molecule 1, humanhuman

TSL 1 (best)

Gene CEACAM1, Length 1,778 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CEACAM1-206ENST00000403136 SDHAF1A6NFY7 115 aa9.53□□□□□ -0.88
CEACAM1-206ENST00000403136 SYS1-DBNDD2H3BUS1 97 aa9.53□□□□□ -0.88
CEACAM1-206ENST00000403136 X6R8D5 127 aa9.53□□□□□ -0.88
CEACAM1-206ENST00000403136 IGHV3-53P01767 116 aa9.52□□□□□ -0.88
CEACAM1-206ENST00000403136 S100A12P80511 92 aa9.52□□□□□ -0.88
CEACAM1-206ENST00000403136 ORMDL2Q53FV1 153 aa9.52□□□□□ -0.88
CEACAM1-206ENST00000403136 TRBV27A0A0K0K1C4 114 aa9.52□□□□□ -0.89
CEACAM1-206ENST00000403136 NEGR1Q7Z3B1 354 aa9.52□□□□□ -0.89
CEACAM1-206ENST00000403136 CMYA5Q8N3K9 4069 aa9.51□□□□□ -0.89
CEACAM1-206ENST00000403136 TRAV4A0A0B4J268 109 aa9.51□□□□□ -0.89
CEACAM1-206ENST00000403136 GAGE12BA1L429 117 aa9.51□□□□□ -0.89
CEACAM1-206ENST00000403136 GAGE7O76087 117 aa9.51□□□□□ -0.89
CEACAM1-206ENST00000403136 NUDT3O95989 172 aa9.51□□□□□ -0.89
CEACAM1-206ENST00000403136 GAGE12FP0CL80 117 aa9.51□□□□□ -0.89
CEACAM1-206ENST00000403136 GAGE12GP0CL81 117 aa9.51□□□□□ -0.89
CEACAM1-206ENST00000403136 GAGE12IP0CL82 117 aa9.51□□□□□ -0.89
CEACAM1-206ENST00000403136 P0DMU3 169 aa9.51□□□□□ -0.89
CEACAM1-206ENST00000403136 FAM231AP0DMU4 169 aa9.51□□□□□ -0.89
CEACAM1-206ENST00000403136 FAM231CP0DMU5 169 aa9.51□□□□□ -0.89
CEACAM1-206ENST00000403136 DEFB135Q30KP9 77 aa9.51□□□□□ -0.89
CEACAM1-206ENST00000403136 PET117Q6UWS5 81 aa9.51□□□□□ -0.89
CEACAM1-206ENST00000403136 ZNF479Q96JC4 524 aa9.51□□□□□ -0.89
CEACAM1-206ENST00000403136 KIR2DL4Q99706 377 aa9.51□□□□□ -0.89
CEACAM1-206ENST00000403136 EMP1P54849 157 aa9.5□□□□□ -0.89
CEACAM1-206ENST00000403136 SPATA12Q7Z6I5 190 aa9.5□□□□□ -0.89
CEACAM1-206ENST00000403136 G3V4G9 280 aa9.5□□□□□ -0.89
CEACAM1-206ENST00000403136 TEX43Q6ZNM6 134 aa9.5□□□□□ -0.89
CEACAM1-206ENST00000403136 IFI27L1Q96BM0 104 aa9.5□□□□□ -0.89
CEACAM1-206ENST00000403136 Q9UF83 564 aa9.5□□□□□ -0.89
CEACAM1-206ENST00000403136 TNFRSF18Q9Y5U5 241 aa9.5□□□□□ -0.89
CEACAM1-206ENST00000403136 NACAE9PAV3 2078 aa9.49□□□□□ -0.89
CEACAM1-206ENST00000403136 TRGV2A0A075B6R0 118 aa9.49□□□□□ -0.89
CEACAM1-206ENST00000403136 A8MZ25 164 aa9.49□□□□□ -0.89
CEACAM1-206ENST00000403136 CIDEAO60543 219 aa9.49□□□□□ -0.89
CEACAM1-206ENST00000403136 OR11H2Q8NH07 326 aa9.49□□□□□ -0.89
CEACAM1-206ENST00000403136 DNAJC30Q96LL9 226 aa9.49□□□□□ -0.89
CEACAM1-206ENST00000403136 C18orf15Q96N68 181 aa9.49□□□□□ -0.89
CEACAM1-206ENST00000403136 PCP4L1A6NKN8 68 aa9.48□□□□□ -0.89
CEACAM1-206ENST00000403136 I3L3M4 83 aa9.48□□□□□ -0.89
CEACAM1-206ENST00000403136 ZNF664Q8N3J9 261 aa9.48□□□□□ -0.89
CEACAM1-206ENST00000403136 DEFB104AQ8WTQ1 72 aa9.48□□□□□ -0.89
CEACAM1-206ENST00000403136 TOMM6Q96B49 74 aa9.48□□□□□ -0.89
CEACAM1-206ENST00000403136 RNF183Q96D59 192 aa9.48□□□□□ -0.89
CEACAM1-206ENST00000403136 MDFIQ99750 246 aa9.48□□□□□ -0.89
CEACAM1-206ENST00000403136 PKD1L1Q8TDX9 2849 aa9.48□□□□□ -0.89
CEACAM1-206ENST00000403136 C20orf202A1L168 122 aa9.47□□□□□ -0.89
CEACAM1-206ENST00000403136 H0Y8G0 127 aa9.47□□□□□ -0.89
CEACAM1-206ENST00000403136 ATP5LO75964 103 aa9.47□□□□□ -0.89
CEACAM1-206ENST00000403136 G0S2P27469 103 aa9.47□□□□□ -0.89
CEACAM1-206ENST00000403136 SAMD5Q5TGI4 173 aa9.47□□□□□ -0.89
CEACAM1-206ENST00000403136 NEXN-AS1Q8NBZ9 246 aa9.47□□□□□ -0.89
CEACAM1-206ENST00000403136 NBEAL2Q6ZNJ1 2754 aa9.47□□□□□ -0.89
CEACAM1-206ENST00000403136 LINC01545Q5VT33 79 aa9.47□□□□□ -0.89
CEACAM1-206ENST00000403136 C2orf66Q6UXQ4 117 aa9.47□□□□□ -0.89
CEACAM1-206ENST00000403136 LINC00612Q8N6U2 182 aa9.47□□□□□ -0.89
CEACAM1-206ENST00000403136 TRBV10-1A0A0K0K1A3 114 aa9.45□□□□□ -0.9
CEACAM1-206ENST00000403136 TSHBP01222 138 aa9.45□□□□□ -0.9
CEACAM1-206ENST00000403136 PRSS1P07477 247 aa9.45□□□□□ -0.9
CEACAM1-206ENST00000403136 DEFB130BP0DP73 79 aa9.45□□□□□ -0.9
CEACAM1-206ENST00000403136 DEFB130AP0DP74 79 aa9.45□□□□□ -0.9
CEACAM1-206ENST00000403136 MIFP14174 115 aa9.45□□□□□ -0.9
CEACAM1-206ENST00000403136 RHOHQ15669 191 aa9.45□□□□□ -0.9
CEACAM1-206ENST00000403136 ATOH7Q8N100 152 aa9.45□□□□□ -0.9
CEACAM1-206ENST00000403136 SCGB3A1Q96QR1 104 aa9.45□□□□□ -0.9
CEACAM1-206ENST00000403136 VAMP8Q9BV40 100 aa9.45□□□□□ -0.9
CEACAM1-206ENST00000403136 IGHV4-28A0A0C4DH34 117 aa9.45□□□□□ -0.9
CEACAM1-206ENST00000403136 LINC01549A6NIU2 74 aa9.45□□□□□ -0.9
CEACAM1-206ENST00000403136 LYRM9A8MSI8 78 aa9.45□□□□□ -0.9
CEACAM1-206ENST00000403136 K7EQD1 137 aa9.45□□□□□ -0.9
CEACAM1-206ENST00000403136 RIPPLY3P57055 190 aa9.45□□□□□ -0.9
CEACAM1-206ENST00000403136 PKIAP61925 76 aa9.45□□□□□ -0.9
CEACAM1-206ENST00000403136 LGALS9CQ6DKI2 356 aa9.45□□□□□ -0.9
CEACAM1-206ENST00000403136 SLC25A29Q8N8R3 303 aa9.45□□□□□ -0.9
CEACAM1-206ENST00000403136 PRO1933Q9H354 126 aa9.45□□□□□ -0.9
CEACAM1-206ENST00000403136 CYSLTR1Q9Y271 337 aa9.45□□□□□ -0.9
CEACAM1-206ENST00000403136 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP9.44□□□□□ -0.9
CEACAM1-206ENST00000403136 FHL2Q14192 279 aa9.44□□□□□ -0.9
CEACAM1-206ENST00000403136 ZNRF2Q8NHG8 242 aa9.44□□□□□ -0.9
CEACAM1-206ENST00000403136 PMCHL2Q9BQD1 86 aa9.44□□□□□ -0.9
CEACAM1-206ENST00000403136 ANK2Q01484 3957 aa9.44□□□□□ -0.9
CEACAM1-206ENST00000403136 TRBV7-3A0A075B6L6 115 aa9.43□□□□□ -0.9
CEACAM1-206ENST00000403136 TRGV4A0A0C4DH28 118 aa9.43□□□□□ -0.9
CEACAM1-206ENST00000403136 TRBV6-4A0A1B0GX49 114 aa9.43□□□□□ -0.9
CEACAM1-206ENST00000403136 FAM222AQ5U5X8 452 aa9.43□□□□□ -0.9
CEACAM1-206ENST00000403136 ERASQ7Z444 233 aa9.43□□□□□ -0.9
CEACAM1-206ENST00000403136 Q8NAQ8 132 aa9.43□□□□□ -0.9
CEACAM1-206ENST00000403136 TP53TG1Q9Y2A0 90 aa9.43□□□□□ -0.9
CEACAM1-206ENST00000403136 PAM16Q9Y3D7 125 aa9.43□□□□□ -0.9
CEACAM1-206ENST00000403136 TRAV9-2A0A087WT02 112 aa9.42□□□□□ -0.9
CEACAM1-206ENST00000403136 DEFB4AO15263 64 aa9.42□□□□□ -0.9
CEACAM1-206ENST00000403136 RPL36AP83881 106 aaKnown RBP9.42□□□□□ -0.9
CEACAM1-206ENST00000403136 RPL36ALQ969Q0 106 aaKnown RBP9.42□□□□□ -0.9
CEACAM1-206ENST00000403136 ZMAT4Q9H898 229 aa9.42□□□□□ -0.9
CEACAM1-206ENST00000403136 DKK2Q9UBU2 259 aa9.42□□□□□ -0.9
CEACAM1-206ENST00000403136 TSTD3H0UI37 97 aa9.42□□□□□ -0.9
CEACAM1-206ENST00000403136 RPL39P62891 51 aaKnown RBP9.42□□□□□ -0.9
CEACAM1-206ENST00000403136 MAJINQ3KP22 176 aa9.42□□□□□ -0.9
CEACAM1-206ENST00000403136 Q6ZN92 141 aa9.42□□□□□ -0.9
CEACAM1-206ENST00000403136 C20orf203Q8NBC4 194 aa9.42□□□□□ -0.9
CEACAM1-206ENST00000403136 IGIPA6NJ69 53 aa9.41□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms