RNA–Protein interactions for RNA: ENST00000397760.8

PDLIM2-204, Transcript of PDZ and LIM domain 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDLIM2, Length 1,847 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-204ENST00000397760 RPL35AP18077 110 aaKnown RBP14.12□□□□□ -0.15
PDLIM2-204ENST00000397760 ORMDL2Q53FV1 153 aa14.12□□□□□ -0.15
PDLIM2-204ENST00000397760 AMMECR1LQ6DCA0 310 aa14.12□□□□□ -0.15
PDLIM2-204ENST00000397760 TRAV12-1A0A0B4J245 112 aa14.11□□□□□ -0.15
PDLIM2-204ENST00000397760 C9orf118A6NHY6 69 aa14.11□□□□□ -0.15
PDLIM2-204ENST00000397760 FAM159AQ6UWV7 190 aa14.11□□□□□ -0.15
PDLIM2-204ENST00000397760 Q8N1Y9 231 aa14.11□□□□□ -0.15
PDLIM2-204ENST00000397760 ANK2Q01484 3957 aa14.11□□□□□ -0.15
PDLIM2-204ENST00000397760 A0A087WX48 190 aa14.11□□□□□ -0.15
PDLIM2-204ENST00000397760 S100A4P26447 101 aaKnown RBP14.11□□□□□ -0.15
PDLIM2-204ENST00000397760 PCP2Q8IVA1 136 aa14.11□□□□□ -0.15
PDLIM2-204ENST00000397760 XCL2Q9UBD3 114 aa14.11□□□□□ -0.15
PDLIM2-204ENST00000397760 RBMY1A1P0DJD3 496 aaKnown RBP14.1□□□□□ -0.15
PDLIM2-204ENST00000397760 RBMY1CP0DJD4 496 aa14.1□□□□□ -0.15
PDLIM2-204ENST00000397760 PLNP26678 52 aa14.1□□□□□ -0.15
PDLIM2-204ENST00000397760 RBMY1FQ15415 496 aaKnown RBP14.1□□□□□ -0.15
PDLIM2-204ENST00000397760 POM121L12Q8N7R1 296 aa14.1□□□□□ -0.15
PDLIM2-204ENST00000397760 TRAV8-6A0A0B4J262 113 aa14.09□□□□□ -0.15
PDLIM2-204ENST00000397760 NXPH4O95158 308 aa14.09□□□□□ -0.15
PDLIM2-204ENST00000397760 RIPPLY3P57055 190 aa14.09□□□□□ -0.15
PDLIM2-204ENST00000397760 AP1S3Q96PC3 154 aa14.09□□□□□ -0.15
PDLIM2-204ENST00000397760 PHLDA3Q9Y5J5 127 aa14.09□□□□□ -0.15
PDLIM2-204ENST00000397760 CMYA5Q8N3K9 4069 aa14.09□□□□□ -0.15
PDLIM2-204ENST00000397760 TRAV26-2A0A0B4J265 109 aa14.08□□□□□ -0.15
PDLIM2-204ENST00000397760 GNRH2O43555 120 aa14.08□□□□□ -0.15
PDLIM2-204ENST00000397760 INSP01308 110 aa14.08□□□□□ -0.15
PDLIM2-204ENST00000397760 KRTAP10-11P60412 298 aa14.08□□□□□ -0.15
PDLIM2-204ENST00000397760 SUMO2P61956 95 aaKnown RBP14.08□□□□□ -0.15
PDLIM2-204ENST00000397760 EGFEM1PQ0D2K5 195 aa14.08□□□□□ -0.15
PDLIM2-204ENST00000397760 GTF2H5Q6ZYL4 71 aa14.08□□□□□ -0.15
PDLIM2-204ENST00000397760 IGHV1OR15-1A0A075B7D0 117 aa14.08□□□□□ -0.16
PDLIM2-204ENST00000397760 LINC01549A6NIU2 74 aa14.08□□□□□ -0.16
PDLIM2-204ENST00000397760 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP14.08□□□□□ -0.16
PDLIM2-204ENST00000397760 G3V4G9 280 aa14.07□□□□□ -0.16
PDLIM2-204ENST00000397760 RPL32P62910 135 aaKnown RBP14.07□□□□□ -0.16
PDLIM2-204ENST00000397760 MORN3Q6PF18 240 aaPredicted RBP14.07□□□□□ -0.16
PDLIM2-204ENST00000397760 TOMM6Q96B49 74 aa14.07□□□□□ -0.16
PDLIM2-204ENST00000397760 GIG44P09565 113 aaPredicted RBP14.06□□□□□ -0.16
PDLIM2-204ENST00000397760 ZC2HC1BQ5TFG8 222 aa14.06□□□□□ -0.16
PDLIM2-204ENST00000397760 RNASE8Q8TDE3 154 aaKnown RBP14.06□□□□□ -0.16
PDLIM2-204ENST00000397760 RASL10AQ92737 203 aa14.06□□□□□ -0.16
PDLIM2-204ENST00000397760 IGKV2D-26A0A0A0MRZ7 120 aa14.05□□□□□ -0.16
PDLIM2-204ENST00000397760 GAGE10A6NGK3 116 aa14.05□□□□□ -0.16
PDLIM2-204ENST00000397760 H7C1H1 209 aa14.05□□□□□ -0.16
PDLIM2-204ENST00000397760 RBX1P62877 108 aa14.05□□□□□ -0.16
PDLIM2-204ENST00000397760 TAL2Q16559 108 aa14.05□□□□□ -0.16
PDLIM2-204ENST00000397760 LINC01587Q99440 93 aa14.05□□□□□ -0.16
PDLIM2-204ENST00000397760 MRPL35Q9NZE8 188 aaKnown RBP14.05□□□□□ -0.16
PDLIM2-204ENST00000397760 F8VRH5 84 aa14.04□□□□□ -0.16
PDLIM2-204ENST00000397760 RNASE3P12724 160 aaKnown RBP14.04□□□□□ -0.16
PDLIM2-204ENST00000397760 HTN1P15515 57 aa14.04□□□□□ -0.16
PDLIM2-204ENST00000397760 SAMD5Q5TGI4 173 aa14.04□□□□□ -0.16
PDLIM2-204ENST00000397760 UFSP1Q6NVU6 142 aa14.04□□□□□ -0.16
PDLIM2-204ENST00000397760 C1QTNF4Q9BXJ3 329 aa14.04□□□□□ -0.16
PDLIM2-204ENST00000397760 CSTL1Q9H114 145 aa14.04□□□□□ -0.16
PDLIM2-204ENST00000397760 C1orf158Q8N1D5 194 aa14.04□□□□□ -0.16
PDLIM2-204ENST00000397760 ERASQ7Z444 233 aa14.03□□□□□ -0.16
PDLIM2-204ENST00000397760 CHAC1Q9BUX1 264 aa14.03□□□□□ -0.16
PDLIM2-204ENST00000397760 TM2D2Q9BX73 214 aa14.03□□□□□ -0.16
PDLIM2-204ENST00000397760 CST9LQ9H4G1 147 aa14.03□□□□□ -0.16
PDLIM2-204ENST00000397760 TRBV25-1A0A075B6N4 114 aa14.02□□□□□ -0.16
PDLIM2-204ENST00000397760 IGHV3OR16-12A0A075B7B8 117 aa14.01□□□□□ -0.17
PDLIM2-204ENST00000397760 GAGE12BA1L429 117 aa14.01□□□□□ -0.17
PDLIM2-204ENST00000397760 SMIM13P0DJ93 91 aa14.01□□□□□ -0.17
PDLIM2-204ENST00000397760 C14orf178Q8N769 122 aaPredicted RBP14.01□□□□□ -0.17
PDLIM2-204ENST00000397760 SCGB3A1Q96QR1 104 aa14.01□□□□□ -0.17
PDLIM2-204ENST00000397760 LINC00467Q9BRT7 94 aa14.01□□□□□ -0.17
PDLIM2-204ENST00000397760 TRGV11A0A075B6L2 103 aa14.01□□□□□ -0.17
PDLIM2-204ENST00000397760 IGHV3-16A0A0C4DH30 117 aa14.01□□□□□ -0.17
PDLIM2-204ENST00000397760 K7EP34 96 aa14.01□□□□□ -0.17
PDLIM2-204ENST00000397760 PRM2P04554 102 aa14.01□□□□□ -0.17
PDLIM2-204ENST00000397760 IGHV4-30-4P0DP06 118 aa14.01□□□□□ -0.17
PDLIM2-204ENST00000397760 OR5A1Q8NGJ0 315 aa14.01□□□□□ -0.17
PDLIM2-204ENST00000397760 MDFICQ9P1T7 246 aa14.01□□□□□ -0.17
PDLIM2-204ENST00000397760 TCTAP57738 103 aa14□□□□□ -0.17
PDLIM2-204ENST00000397760 NEXN-AS1Q8NBZ9 246 aa14□□□□□ -0.17
PDLIM2-204ENST00000397760 CSNK1G2-AS1Q8NCQ2 148 aa14□□□□□ -0.17
PDLIM2-204ENST00000397760 KIF25-AS1Q9Y6Z4 181 aa14□□□□□ -0.17
PDLIM2-204ENST00000397760 H3BUT2 72 aa13.99□□□□□ -0.17
PDLIM2-204ENST00000397760 SPRY2O43597 315 aa13.99□□□□□ -0.17
PDLIM2-204ENST00000397760 OCIAD2Q56VL3 154 aa13.99□□□□□ -0.17
PDLIM2-204ENST00000397760 CEND1Q8N111 149 aa13.99□□□□□ -0.17
PDLIM2-204ENST00000397760 CHTOPQ9Y3Y2 248 aaKnown RBP13.99□□□□□ -0.17
PDLIM2-204ENST00000397760 PKD1L1Q8TDX9 2849 aa13.98□□□□□ -0.17
PDLIM2-204ENST00000397760 A0A1W2PPM0 123 aa13.98□□□□□ -0.17
PDLIM2-204ENST00000397760 MGPP08493 103 aa13.98□□□□□ -0.17
PDLIM2-204ENST00000397760 APOC4P55056 127 aa13.98□□□□□ -0.17
PDLIM2-204ENST00000397760 KIR2DL5BQ8NHK3 375 aa13.98□□□□□ -0.17
PDLIM2-204ENST00000397760 GCSHP23434 173 aa13.97□□□□□ -0.17
PDLIM2-204ENST00000397760 LINC00315P59091 139 aa13.97□□□□□ -0.17
PDLIM2-204ENST00000397760 C2orf66Q6UXQ4 117 aa13.97□□□□□ -0.17
PDLIM2-204ENST00000397760 RPL39LQ96EH5 51 aaKnown RBP13.97□□□□□ -0.17
PDLIM2-204ENST00000397760 C9orf85Q96MD7 179 aa13.97□□□□□ -0.17
PDLIM2-204ENST00000397760 K7ERU9 68 aa13.96□□□□□ -0.17
PDLIM2-204ENST00000397760 FABP2P12104 132 aa13.95□□□□□ -0.18
PDLIM2-204ENST00000397760 AZU1P20160 251 aa13.95□□□□□ -0.18
PDLIM2-204ENST00000397760 FXYD2P54710 66 aa13.95□□□□□ -0.18
PDLIM2-204ENST00000397760 ZNF415Q09FC8 603 aa13.94□□□□□ -0.18
PDLIM2-204ENST00000397760 PAPPA-AS1Q5QFB9 102 aa13.94□□□□□ -0.18
PDLIM2-204ENST00000397760 BAALCQ8WXS3 180 aa13.94□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms