RNA–Protein interactions for RNA: ENST00000397109.7

SEC13-208, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 1 (best) BASIC

Gene SEC13, Length 1,467 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-208ENST00000397109 NAGKQ9UJ70 344 aa10.16□□□□□ -0.78
SEC13-208ENST00000397109 LAMTOR2Q9Y2Q5 125 aa10.16□□□□□ -0.78
SEC13-208ENST00000397109 A0A0J9YY99 117 aa10.15□□□□□ -0.78
SEC13-208ENST00000397109 M0R2N4 97 aa10.15□□□□□ -0.78
SEC13-208ENST00000397109 LINC00310P59036 64 aa10.15□□□□□ -0.78
SEC13-208ENST00000397109 LINC00336Q6ZUF6 198 aa10.15□□□□□ -0.78
SEC13-208ENST00000397109 SAMD10Q9BYL1 202 aa10.15□□□□□ -0.78
SEC13-208ENST00000397109 MRPL16Q9NX20 251 aaKnown RBP10.15□□□□□ -0.78
SEC13-208ENST00000397109 MDFICQ9P1T7 246 aa10.15□□□□□ -0.78
SEC13-208ENST00000397109 IGLV2-18A0A075B6J9 118 aa10.14□□□□□ -0.79
SEC13-208ENST00000397109 NUPR1O60356 82 aa10.14□□□□□ -0.79
SEC13-208ENST00000397109 BIRC6Q9NR09 4857 aa10.14□□□□□ -0.79
SEC13-208ENST00000397109 FRAS1Q86XX4 4008 aa10.13□□□□□ -0.79
SEC13-208ENST00000397109 ASIPP42127 132 aa10.13□□□□□ -0.79
SEC13-208ENST00000397109 Q6ZR54 194 aa10.13□□□□□ -0.79
SEC13-208ENST00000397109 ORMDL3Q8N138 153 aa10.13□□□□□ -0.79
SEC13-208ENST00000397109 RASL10AQ92737 203 aa10.13□□□□□ -0.79
SEC13-208ENST00000397109 NIT2Q9NQR4 276 aa10.13□□□□□ -0.79
SEC13-208ENST00000397109 IGHV3-16A0A0C4DH30 117 aa10.12□□□□□ -0.79
SEC13-208ENST00000397109 GNRH2O43555 120 aa10.12□□□□□ -0.79
SEC13-208ENST00000397109 HSBP1O75506 76 aa10.12□□□□□ -0.79
SEC13-208ENST00000397109 LINC00614P0C842 121 aa10.12□□□□□ -0.79
SEC13-208ENST00000397109 IQCJQ1A5X6 159 aa10.12□□□□□ -0.79
SEC13-208ENST00000397109 NIT1Q86X76 327 aa10.12□□□□□ -0.79
SEC13-208ENST00000397109 SCRT2Q9NQ03 307 aa10.12□□□□□ -0.79
SEC13-208ENST00000397109 PRO0255Q9UI72 69 aa10.12□□□□□ -0.79
SEC13-208ENST00000397109 LINC00588Q9Y4M8 146 aa10.12□□□□□ -0.79
SEC13-208ENST00000397109 M0R2P5 195 aa10.11□□□□□ -0.79
SEC13-208ENST00000397109 PAX4O43316 350 aa10.11□□□□□ -0.79
SEC13-208ENST00000397109 IGHV3-53P01767 116 aa10.11□□□□□ -0.79
SEC13-208ENST00000397109 S100A4P26447 101 aaKnown RBP10.11□□□□□ -0.79
SEC13-208ENST00000397109 AMTP48728 403 aa10.11□□□□□ -0.79
SEC13-208ENST00000397109 ZNRF2Q8NHG8 242 aa10.11□□□□□ -0.79
SEC13-208ENST00000397109 VSIG2Q96IQ7 327 aa10.11□□□□□ -0.79
SEC13-208ENST00000397109 SPANXN1Q5VSR9 72 aa10.1□□□□□ -0.79
SEC13-208ENST00000397109 C9orf85Q96MD7 179 aa10.1□□□□□ -0.79
SEC13-208ENST00000397109 HHLA3Q9XRX5 114 aa10.1□□□□□ -0.79
SEC13-208ENST00000397109 A0A096LPF7 62 aa10.1□□□□□ -0.79
SEC13-208ENST00000397109 TRGV4A0A0C4DH28 118 aa10.1□□□□□ -0.79
SEC13-208ENST00000397109 RNASE3P12724 160 aaKnown RBP10.1□□□□□ -0.79
SEC13-208ENST00000397109 CKS2P33552 79 aa10.1□□□□□ -0.79
SEC13-208ENST00000397109 FHL2Q14192 279 aa10.1□□□□□ -0.79
SEC13-208ENST00000397109 MRPL51Q4U2R6 128 aaKnown RBP10.1□□□□□ -0.79
SEC13-208ENST00000397109 AMN1Q8IY45 258 aa10.1□□□□□ -0.79
SEC13-208ENST00000397109 ICOSQ9Y6W8 199 aa10.1□□□□□ -0.79
SEC13-208ENST00000397109 TRAV4A0A0B4J268 109 aa10.09□□□□□ -0.79
SEC13-208ENST00000397109 CRYBA4P53673 196 aa10.09□□□□□ -0.79
SEC13-208ENST00000397109 ESRGQ1W209 222 aa10.09□□□□□ -0.79
SEC13-208ENST00000397109 C1orf134Q5TEV5 83 aa10.09□□□□□ -0.79
SEC13-208ENST00000397109 PTH2Q96A98 100 aa10.09□□□□□ -0.79
SEC13-208ENST00000397109 PRELID3AQ96N28 172 aa10.09□□□□□ -0.79
SEC13-208ENST00000397109 UPK3BQ9BT76 320 aa10.09□□□□□ -0.79
SEC13-208ENST00000397109 PHLDA3Q9Y5J5 127 aa10.09□□□□□ -0.79
SEC13-208ENST00000397109 NBDYA0A0U1RRE5 68 aa10.08□□□□□ -0.8
SEC13-208ENST00000397109 PRSS47A8MTI9 375 aa10.08□□□□□ -0.8
SEC13-208ENST00000397109 D6R8Y8 96 aa10.08□□□□□ -0.8
SEC13-208ENST00000397109 RTL8CO15255 209 aa10.08□□□□□ -0.8
SEC13-208ENST00000397109 NXPH4O95158 308 aa10.08□□□□□ -0.8
SEC13-208ENST00000397109 MRPL23Q16540 153 aaKnown RBP10.08□□□□□ -0.8
SEC13-208ENST00000397109 RNF185Q96GF1 192 aa10.08□□□□□ -0.8
SEC13-208ENST00000397109 Q9H8V8 135 aa10.08□□□□□ -0.8
SEC13-208ENST00000397109 MRPS16Q9Y3D3 137 aaKnown RBP10.08□□□□□ -0.8
SEC13-208ENST00000397109 PPP1R17O96001 155 aa10.07□□□□□ -0.8
SEC13-208ENST00000397109 PIK3CD-AS1Q5SR53 167 aa10.07□□□□□ -0.8
SEC13-208ENST00000397109 RNASEKQ6P5S7 137 aaKnown RBP10.07□□□□□ -0.8
SEC13-208ENST00000397109 OR4C5Q8NGB2 326 aa10.07□□□□□ -0.8
SEC13-208ENST00000397109 OR10AG1Q8NH19 301 aa10.07□□□□□ -0.8
SEC13-208ENST00000397109 PRSS3P2Q8NHM4 247 aa10.07□□□□□ -0.8
SEC13-208ENST00000397109 MRAP2Q96G30 205 aa10.07□□□□□ -0.8
SEC13-208ENST00000397109 ZNF479Q96JC4 524 aa10.07□□□□□ -0.8
SEC13-208ENST00000397109 AP5S1Q9NUS5 200 aa10.07□□□□□ -0.8
SEC13-208ENST00000397109 DNAH17Q9UFH2 4485 aa10.06□□□□□ -0.8
SEC13-208ENST00000397109 PRSS29PA6NIE9 313 aa10.06□□□□□ -0.8
SEC13-208ENST00000397109 H3BVH4 76 aa10.06□□□□□ -0.8
SEC13-208ENST00000397109 CIDEAO60543 219 aa10.06□□□□□ -0.8
SEC13-208ENST00000397109 TTC32Q5I0X7 151 aa10.06□□□□□ -0.8
SEC13-208ENST00000397109 URB1-AS1Q96HZ7 61 aa10.06□□□□□ -0.8
SEC13-208ENST00000397109 MSRB1Q9NZV6 116 aa10.06□□□□□ -0.8
SEC13-208ENST00000397109 LINC01546A6NGU7 62 aa10.05□□□□□ -0.8
SEC13-208ENST00000397109 FA2HQ7L5A8 372 aa10.05□□□□□ -0.8
SEC13-208ENST00000397109 DPH3P1Q9H4G8 78 aa10.05□□□□□ -0.8
SEC13-208ENST00000397109 NXT2Q9NPJ8 142 aaKnown RBP10.05□□□□□ -0.8
SEC13-208ENST00000397109 SCGB1D1O95968 90 aa10.04□□□□□ -0.8
SEC13-208ENST00000397109 EVI2AP22794 236 aa10.04□□□□□ -0.8
SEC13-208ENST00000397109 ZNF876PQ49A33 203 aa10.04□□□□□ -0.8
SEC13-208ENST00000397109 NEGR1Q7Z3B1 354 aa10.04□□□□□ -0.8
SEC13-208ENST00000397109 MAP1LC3AQ9H492 121 aa10.04□□□□□ -0.8
SEC13-208ENST00000397109 DNAH2Q9P225 4427 aa10.04□□□□□ -0.8
SEC13-208ENST00000397109 MUC21A0A0G2JKD1 596 aa10.04□□□□□ -0.8
SEC13-208ENST00000397109 MUC21A0A140T8X8 626 aa10.04□□□□□ -0.8
SEC13-208ENST00000397109 M0R381 172 aa10.04□□□□□ -0.8
SEC13-208ENST00000397109 C6orf223Q8N319 242 aa10.04□□□□□ -0.8
SEC13-208ENST00000397109 SYT8Q8NBV8 401 aa10.04□□□□□ -0.8
SEC13-208ENST00000397109 AP1S3Q96PC3 154 aa10.04□□□□□ -0.8
SEC13-208ENST00000397109 HSPB8Q9UJY1 196 aa10.04□□□□□ -0.8
SEC13-208ENST00000397109 HECTD4Q9Y4D8 3996 aa10.03□□□□□ -0.8
SEC13-208ENST00000397109 K7EMI3 77 aa10.03□□□□□ -0.8
SEC13-208ENST00000397109 LEPROTL1O95214 131 aa10.03□□□□□ -0.8
SEC13-208ENST00000397109 SSTP61278 116 aa10.03□□□□□ -0.8
SEC13-208ENST00000397109 FAM19A2Q8N3H0 131 aa10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms