RNA–Protein interactions for RNA: ENST00000397017.6

MCF2L-205, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 5

Gene MCF2L, Length 3,903 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-205ENST00000397017 HLA-DRB4P13762 266 aa11.31□□□□□ -0.6
MCF2L-205ENST00000397017 RPL36AP83881 106 aaKnown RBP11.31□□□□□ -0.6
MCF2L-205ENST00000397017 RPL36ALQ969Q0 106 aaKnown RBP11.31□□□□□ -0.6
MCF2L-205ENST00000397017 HLA-DRB4X5D2U9 266 aa11.31□□□□□ -0.6
MCF2L-205ENST00000397017 RNASE1P07998 156 aaKnown RBP11.3□□□□□ -0.6
MCF2L-205ENST00000397017 MUC4Q99102 2169 aa11.3□□□□□ -0.6
MCF2L-205ENST00000397017 DEFB135Q30KP9 77 aa11.3□□□□□ -0.6
MCF2L-205ENST00000397017 SCGB1C2P0DMR2 95 aa11.3□□□□□ -0.6
MCF2L-205ENST00000397017 IGLC3P0DOY3 106 aa11.3□□□□□ -0.6
MCF2L-205ENST00000397017 M0R2P5 195 aa11.29□□□□□ -0.6
MCF2L-205ENST00000397017 TRPT1Q86TN4 253 aaKnown RBP11.29□□□□□ -0.6
MCF2L-205ENST00000397017 MRAPQ8TCY5 172 aa11.29□□□□□ -0.6
MCF2L-205ENST00000397017 SPXQ9BT56 116 aa11.29□□□□□ -0.6
MCF2L-205ENST00000397017 BAHCC1Q9P281 2608 aa11.29□□□□□ -0.6
MCF2L-205ENST00000397017 IGKV2D-29A0A075B6S2 120 aaPredicted RBP11.29□□□□□ -0.6
MCF2L-205ENST00000397017 IGKV2-29A2NJV5 120 aaPredicted RBP11.29□□□□□ -0.6
MCF2L-205ENST00000397017 C19orf54Q5BKX5 351 aa11.29□□□□□ -0.6
MCF2L-205ENST00000397017 OPRPNQ99935 248 aaPredicted RBP11.29□□□□□ -0.6
MCF2L-205ENST00000397017 A0A0J9YY99 117 aa11.29□□□□□ -0.6
MCF2L-205ENST00000397017 RNASE3P12724 160 aaKnown RBP11.29□□□□□ -0.6
MCF2L-205ENST00000397017 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP11.29□□□□□ -0.6
MCF2L-205ENST00000397017 CUBNO60494 3623 aa11.29□□□□□ -0.6
MCF2L-205ENST00000397017 CCL25O15444 150 aa11.29□□□□□ -0.6
MCF2L-205ENST00000397017 NPC2P61916 151 aa11.29□□□□□ -0.6
MCF2L-205ENST00000397017 CLUHP3Q96NS8 147 aa11.29□□□□□ -0.6
MCF2L-205ENST00000397017 CIDEAO60543 219 aa11.28□□□□□ -0.6
MCF2L-205ENST00000397017 APOMO95445 188 aa11.28□□□□□ -0.6
MCF2L-205ENST00000397017 A8MWV9 139 aa11.28□□□□□ -0.6
MCF2L-205ENST00000397017 TEX43Q6ZNM6 134 aa11.28□□□□□ -0.6
MCF2L-205ENST00000397017 ZNF815PA8K554 130 aa11.27□□□□□ -0.6
MCF2L-205ENST00000397017 RNF185Q96GF1 192 aa11.27□□□□□ -0.6
MCF2L-205ENST00000397017 BSNQ9UPA5 3926 aa11.27□□□□□ -0.61
MCF2L-205ENST00000397017 NBEAL1Q6ZS30 2694 aa11.27□□□□□ -0.61
MCF2L-205ENST00000397017 CEMP1Q6PRD7 247 aaPredicted RBP11.27□□□□□ -0.61
MCF2L-205ENST00000397017 PCP2Q8IVA1 136 aa11.27□□□□□ -0.61
MCF2L-205ENST00000397017 ZNF625Q96I27 306 aaPredicted RBP11.27□□□□□ -0.61
MCF2L-205ENST00000397017 C11orf68Q9H3H3 251 aaKnown RBP11.27□□□□□ -0.61
MCF2L-205ENST00000397017 CRLF1O75462 422 aa11.27□□□□□ -0.61
MCF2L-205ENST00000397017 MXRA5Q9NR99 2828 aa11.27□□□□□ -0.61
MCF2L-205ENST00000397017 NIPBLQ6KC79 2804 aaeCLIP11.26□□□□□ -0.61
MCF2L-205ENST00000397017 CMC4P56277 68 aaPredicted RBP11.26□□□□□ -0.61
MCF2L-205ENST00000397017 ZNF493Q6ZR52 646 aa11.26□□□□□ -0.61
MCF2L-205ENST00000397017 Q6ZTI0 123 aa11.26□□□□□ -0.61
MCF2L-205ENST00000397017 NHP2Q9NX24 153 aaKnown RBP11.26□□□□□ -0.61
MCF2L-205ENST00000397017 K7ERU9 68 aa11.26□□□□□ -0.61
MCF2L-205ENST00000397017 LOC107984156A0A0G2JMH3 177 aa11.26□□□□□ -0.61
MCF2L-205ENST00000397017 TMEM238C9JI98 176 aa11.26□□□□□ -0.61
MCF2L-205ENST00000397017 F5H768 121 aa11.26□□□□□ -0.61
MCF2L-205ENST00000397017 K7EMI3 77 aa11.26□□□□□ -0.61
MCF2L-205ENST00000397017 PAPPA-AS1Q5QFB9 102 aa11.26□□□□□ -0.61
MCF2L-205ENST00000397017 ARL17AQ8IVW1 177 aa11.26□□□□□ -0.61
MCF2L-205ENST00000397017 A6NDN8 102 aa11.25□□□□□ -0.61
MCF2L-205ENST00000397017 RASL10AQ92737 203 aa11.25□□□□□ -0.61
MCF2L-205ENST00000397017 SMAGPQ0VAQ4 97 aa11.25□□□□□ -0.61
MCF2L-205ENST00000397017 ODF3L2Q3SX64 289 aa11.25□□□□□ -0.61
MCF2L-205ENST00000397017 ADARB2-AS1A8MUL3 147 aa11.25□□□□□ -0.61
MCF2L-205ENST00000397017 I3L3M4 83 aa11.25□□□□□ -0.61
MCF2L-205ENST00000397017 SOCS3O14543 225 aa11.25□□□□□ -0.61
MCF2L-205ENST00000397017 URB1-AS1Q96HZ7 61 aa11.24□□□□□ -0.61
MCF2L-205ENST00000397017 TMEM101Q96IK0 257 aa11.24□□□□□ -0.61
MCF2L-205ENST00000397017 C20orf144Q9BQM9 153 aa11.24□□□□□ -0.61
MCF2L-205ENST00000397017 PRSS29PA6NIE9 313 aa11.24□□□□□ -0.61
MCF2L-205ENST00000397017 PSMB2P49721 201 aa11.24□□□□□ -0.61
MCF2L-205ENST00000397017 MEIG1Q5JSS6 88 aa11.24□□□□□ -0.61
MCF2L-205ENST00000397017 CLPSL2Q6UWE3 100 aa11.24□□□□□ -0.61
MCF2L-205ENST00000397017 GTF2H5Q6ZYL4 71 aa11.23□□□□□ -0.61
MCF2L-205ENST00000397017 GAGE6Q13070 117 aa11.23□□□□□ -0.61
MCF2L-205ENST00000397017 KRTAP1-3Q8IUG1 177 aa11.23□□□□□ -0.61
MCF2L-205ENST00000397017 KLLNB2CW77 178 aa11.23□□□□□ -0.61
MCF2L-205ENST00000397017 CSMD2Q7Z408 3487 aa11.22□□□□□ -0.61
MCF2L-205ENST00000397017 RBX1P62877 108 aa11.22□□□□□ -0.61
MCF2L-205ENST00000397017 C20orf78Q9BR46 151 aa11.22□□□□□ -0.61
MCF2L-205ENST00000397017 PRADC1Q9BSG0 188 aa11.22□□□□□ -0.61
MCF2L-205ENST00000397017 CHAC1Q9BUX1 264 aa11.22□□□□□ -0.61
MCF2L-205ENST00000397017 PRB2P02812 416 aaPredicted RBP11.22□□□□□ -0.61
MCF2L-205ENST00000397017 ESDP10768 282 aa11.22□□□□□ -0.61
MCF2L-205ENST00000397017 ZFP2Q6ZN57 461 aa11.22□□□□□ -0.61
MCF2L-205ENST00000397017 RHODO00212 210 aa11.21□□□□□ -0.61
MCF2L-205ENST00000397017 SPATA12Q7Z6I5 190 aa11.21□□□□□ -0.61
MCF2L-205ENST00000397017 TRAV2A0A0B4J234 112 aa11.21□□□□□ -0.61
MCF2L-205ENST00000397017 HIVEP1P15822 2718 aa11.21□□□□□ -0.62
MCF2L-205ENST00000397017 H3BUT2 72 aa11.21□□□□□ -0.62
MCF2L-205ENST00000397017 DAD1P61803 113 aa11.21□□□□□ -0.62
MCF2L-205ENST00000397017 OXLD1Q5BKU9 147 aa11.21□□□□□ -0.62
MCF2L-205ENST00000397017 C9orf66Q5T8R8 295 aa11.21□□□□□ -0.62
MCF2L-205ENST00000397017 ZNF479Q96JC4 524 aa11.21□□□□□ -0.62
MCF2L-205ENST00000397017 GTSF1LQ9H1H1 148 aa11.2□□□□□ -0.62
MCF2L-205ENST00000397017 FSHBP01225 129 aa11.2□□□□□ -0.62
MCF2L-205ENST00000397017 LGALS9BQ3B8N2 356 aa11.2□□□□□ -0.62
MCF2L-205ENST00000397017 LGALS9CQ6DKI2 356 aa11.2□□□□□ -0.62
MCF2L-205ENST00000397017 OR5A1Q8NGJ0 315 aa11.19□□□□□ -0.62
MCF2L-205ENST00000397017 A0A087WX48 190 aa11.19□□□□□ -0.62
MCF2L-205ENST00000397017 F8VRH5 84 aa11.19□□□□□ -0.62
MCF2L-205ENST00000397017 TRAV25A0A0B4J276 109 aa11.18□□□□□ -0.62
MCF2L-205ENST00000397017 PLNP26678 52 aa11.18□□□□□ -0.62
MCF2L-205ENST00000397017 PMVKQ15126 192 aa11.18□□□□□ -0.62
MCF2L-205ENST00000397017 UBE2V1Q13404 147 aa11.18□□□□□ -0.62
MCF2L-205ENST00000397017 A0A0J9YXV3 536 aa11.18□□□□□ -0.62
MCF2L-205ENST00000397017 CRXO43186 299 aaPredicted RBP11.18□□□□□ -0.62
MCF2L-205ENST00000397017 NDUFA11Q86Y39 141 aa11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 120.7 ms