RNA–Protein interactions for RNA: ENST00000396854.8

TM9SF1-202, Transcript of transmembrane 9 superfamily member 1, humanhuman

TSL 1 (best) BASIC

Gene TM9SF1, Length 2,055 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF1-202ENST00000396854 Q6ZQT7 251 aa10.85□□□□□ -0.67
TM9SF1-202ENST00000396854 TRAV21A0A0B4J279 112 aa10.84□□□□□ -0.67
TM9SF1-202ENST00000396854 H3BVH4 76 aa10.84□□□□□ -0.67
TM9SF1-202ENST00000396854 SMIM17P0DL12 118 aa10.84□□□□□ -0.67
TM9SF1-202ENST00000396854 CDKN1BP46527 198 aa10.84□□□□□ -0.67
TM9SF1-202ENST00000396854 HIGD1BQ9P298 99 aa10.84□□□□□ -0.67
TM9SF1-202ENST00000396854 MGAM2Q2M2H8 2515 aa10.83□□□□□ -0.67
TM9SF1-202ENST00000396854 DPM2O94777 84 aa10.83□□□□□ -0.68
TM9SF1-202ENST00000396854 IGKV2D-26A0A0A0MRZ7 120 aa10.83□□□□□ -0.68
TM9SF1-202ENST00000396854 TRAV26-2A0A0B4J265 109 aa10.83□□□□□ -0.68
TM9SF1-202ENST00000396854 A8MZ25 164 aa10.83□□□□□ -0.68
TM9SF1-202ENST00000396854 SPINK13Q1W4C9 94 aa10.83□□□□□ -0.68
TM9SF1-202ENST00000396854 IGHV4-30-4P0DP06 118 aa10.82□□□□□ -0.68
TM9SF1-202ENST00000396854 MORN3Q6PF18 240 aaPredicted RBP10.82□□□□□ -0.68
TM9SF1-202ENST00000396854 CST9LQ9H4G1 147 aa10.82□□□□□ -0.68
TM9SF1-202ENST00000396854 RPL35AP18077 110 aaKnown RBP10.81□□□□□ -0.68
TM9SF1-202ENST00000396854 UFSP1Q6NVU6 142 aa10.81□□□□□ -0.68
TM9SF1-202ENST00000396854 AP1S3Q96PC3 154 aa10.81□□□□□ -0.68
TM9SF1-202ENST00000396854 NBEAL1Q6ZS30 2694 aa10.81□□□□□ -0.68
TM9SF1-202ENST00000396854 MED14OSP0DP75 135 aa10.81□□□□□ -0.68
TM9SF1-202ENST00000396854 SMIM2Q9BVW6 85 aa10.81□□□□□ -0.68
TM9SF1-202ENST00000396854 GAGE10A6NGK3 116 aa10.8□□□□□ -0.68
TM9SF1-202ENST00000396854 GTF2H5Q6ZYL4 71 aa10.8□□□□□ -0.68
TM9SF1-202ENST00000396854 A0A087WX48 190 aa10.8□□□□□ -0.68
TM9SF1-202ENST00000396854 GAGE12BA1L429 117 aa10.8□□□□□ -0.68
TM9SF1-202ENST00000396854 J3KRW8 73 aa10.8□□□□□ -0.68
TM9SF1-202ENST00000396854 GIG44P09565 113 aaPredicted RBP10.8□□□□□ -0.68
TM9SF1-202ENST00000396854 RNASE4P34096 147 aaKnown RBP10.8□□□□□ -0.68
TM9SF1-202ENST00000396854 OCIAD2Q56VL3 154 aa10.8□□□□□ -0.68
TM9SF1-202ENST00000396854 ZC2HC1BQ5TFG8 222 aa10.8□□□□□ -0.68
TM9SF1-202ENST00000396854 NOTCH1P46531 2555 aa10.79□□□□□ -0.68
TM9SF1-202ENST00000396854 TRAV12-2A0A075B6T6 113 aa10.79□□□□□ -0.68
TM9SF1-202ENST00000396854 H3BUT2 72 aa10.79□□□□□ -0.68
TM9SF1-202ENST00000396854 ASIPP42127 132 aa10.79□□□□□ -0.68
TM9SF1-202ENST00000396854 KIR2DL5BQ8NHK3 375 aa10.79□□□□□ -0.68
TM9SF1-202ENST00000396854 C1QTNF4Q9BXJ3 329 aa10.79□□□□□ -0.68
TM9SF1-202ENST00000396854 MRPL35Q9NZE8 188 aaKnown RBP10.79□□□□□ -0.68
TM9SF1-202ENST00000396854 C20orf78Q9BR46 151 aa10.78□□□□□ -0.68
TM9SF1-202ENST00000396854 CHAC1Q9BUX1 264 aa10.78□□□□□ -0.68
TM9SF1-202ENST00000396854 CSTL1Q9H114 145 aa10.78□□□□□ -0.68
TM9SF1-202ENST00000396854 TRAV12-1A0A0B4J245 112 aa10.78□□□□□ -0.68
TM9SF1-202ENST00000396854 K7EMI3 77 aa10.78□□□□□ -0.68
TM9SF1-202ENST00000396854 K7EP34 96 aa10.78□□□□□ -0.68
TM9SF1-202ENST00000396854 INSP01308 110 aa10.78□□□□□ -0.68
TM9SF1-202ENST00000396854 ORMDL2Q53FV1 153 aa10.78□□□□□ -0.68
TM9SF1-202ENST00000396854 DPH3P1Q9H4G8 78 aa10.78□□□□□ -0.68
TM9SF1-202ENST00000396854 TRBV25-1A0A075B6N4 114 aa10.77□□□□□ -0.69
TM9SF1-202ENST00000396854 PLNP26678 52 aa10.77□□□□□ -0.69
TM9SF1-202ENST00000396854 PCP4P48539 62 aa10.77□□□□□ -0.69
TM9SF1-202ENST00000396854 APOC4P55056 127 aa10.77□□□□□ -0.69
TM9SF1-202ENST00000396854 RASL10AQ92737 203 aa10.77□□□□□ -0.69
TM9SF1-202ENST00000396854 XCL2Q9UBD3 114 aa10.77□□□□□ -0.69
TM9SF1-202ENST00000396854 TRAV12-3A0A0B4J271 114 aa10.77□□□□□ -0.69
TM9SF1-202ENST00000396854 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP10.77□□□□□ -0.69
TM9SF1-202ENST00000396854 K7EIL1 84 aa10.77□□□□□ -0.69
TM9SF1-202ENST00000396854 M0R381 172 aa10.77□□□□□ -0.69
TM9SF1-202ENST00000396854 RBMY1A1P0DJD3 496 aaKnown RBP10.77□□□□□ -0.69
TM9SF1-202ENST00000396854 RBMY1CP0DJD4 496 aa10.77□□□□□ -0.69
TM9SF1-202ENST00000396854 S100A4P26447 101 aaKnown RBP10.77□□□□□ -0.69
TM9SF1-202ENST00000396854 SUMO2P61956 95 aaKnown RBP10.77□□□□□ -0.69
TM9SF1-202ENST00000396854 RBMY1FQ15415 496 aaKnown RBP10.77□□□□□ -0.69
TM9SF1-202ENST00000396854 ANXA2RQ3ZCQ2 193 aa10.77□□□□□ -0.69
TM9SF1-202ENST00000396854 TTTY13Q9BZ97 58 aa10.77□□□□□ -0.69
TM9SF1-202ENST00000396854 A0A1W2PPM0 123 aa10.76□□□□□ -0.69
TM9SF1-202ENST00000396854 CSNK1G2-AS1Q8NCQ2 148 aa10.76□□□□□ -0.69
TM9SF1-202ENST00000396854 TOMM6Q96B49 74 aa10.76□□□□□ -0.69
TM9SF1-202ENST00000396854 PHLDA3Q9Y5J5 127 aa10.76□□□□□ -0.69
TM9SF1-202ENST00000396854 PRB2P02812 416 aaPredicted RBP10.75□□□□□ -0.69
TM9SF1-202ENST00000396854 SMIM13P0DJ93 91 aa10.75□□□□□ -0.69
TM9SF1-202ENST00000396854 RAB37Q96AX2 223 aa10.75□□□□□ -0.69
TM9SF1-202ENST00000396854 H7C1H1 209 aa10.75□□□□□ -0.69
TM9SF1-202ENST00000396854 NXPH4O95158 308 aa10.75□□□□□ -0.69
TM9SF1-202ENST00000396854 GCSHP23434 173 aa10.75□□□□□ -0.69
TM9SF1-202ENST00000396854 FXYD2P54710 66 aa10.75□□□□□ -0.69
TM9SF1-202ENST00000396854 POM121L12Q8N7R1 296 aa10.75□□□□□ -0.69
TM9SF1-202ENST00000396854 TM2D2Q9BX73 214 aa10.75□□□□□ -0.69
TM9SF1-202ENST00000396854 F8VRH5 84 aa10.74□□□□□ -0.69
TM9SF1-202ENST00000396854 RNASE3P12724 160 aaKnown RBP10.74□□□□□ -0.69
TM9SF1-202ENST00000396854 RNF151Q2KHN1 245 aa10.74□□□□□ -0.69
TM9SF1-202ENST00000396854 C1orf158Q8N1D5 194 aa10.74□□□□□ -0.69
TM9SF1-202ENST00000396854 C14orf178Q8N769 122 aaPredicted RBP10.74□□□□□ -0.69
TM9SF1-202ENST00000396854 OR5A1Q8NGJ0 315 aa10.74□□□□□ -0.69
TM9SF1-202ENST00000396854 NAA38Q9BRA0 125 aaKnown RBP10.74□□□□□ -0.69
TM9SF1-202ENST00000396854 CEND1Q8N111 149 aa10.73□□□□□ -0.69
TM9SF1-202ENST00000396854 RPL39LQ96EH5 51 aaKnown RBP10.73□□□□□ -0.69
TM9SF1-202ENST00000396854 K7ERU9 68 aa10.73□□□□□ -0.69
TM9SF1-202ENST00000396854 SPRY2O43597 315 aa10.73□□□□□ -0.69
TM9SF1-202ENST00000396854 PPP1R17O96001 155 aa10.73□□□□□ -0.69
TM9SF1-202ENST00000396854 TAL2Q16559 108 aa10.73□□□□□ -0.69
TM9SF1-202ENST00000396854 FAM159AQ6UWV7 190 aa10.73□□□□□ -0.69
TM9SF1-202ENST00000396854 SCGB3A1Q96QR1 104 aa10.73□□□□□ -0.69
TM9SF1-202ENST00000396854 LINC00467Q9BRT7 94 aa10.73□□□□□ -0.69
TM9SF1-202ENST00000396854 MUC4Q99102 2169 aa10.72□□□□□ -0.69
TM9SF1-202ENST00000396854 MAPKAPK5-AS1Q8N8E1 139 aa10.72□□□□□ -0.69
TM9SF1-202ENST00000396854 NEXN-AS1Q8NBZ9 246 aa10.72□□□□□ -0.69
TM9SF1-202ENST00000396854 PHLDA1Q8WV24 401 aaPredicted RBP10.72□□□□□ -0.69
TM9SF1-202ENST00000396854 IGHV1OR15-1A0A075B7D0 117 aa10.72□□□□□ -0.69
TM9SF1-202ENST00000396854 GNRH2O43555 120 aa10.72□□□□□ -0.69
TM9SF1-202ENST00000396854 MGPP08493 103 aa10.72□□□□□ -0.69
TM9SF1-202ENST00000396854 FABP2P12104 132 aa10.72□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms