RNA–Protein interactions for RNA: ENST00000395751.8

SREBF1-203, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 2

Gene SREBF1, Length 4,653 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-203ENST00000395751 VPREB3Q9UKI3 123 aa13.01□□□□□ -0.33
SREBF1-203ENST00000395751 USP17L23D6RBM5 183 aa13.01□□□□□ -0.33
SREBF1-203ENST00000395751 LINC00526Q96FQ7 95 aa13.01□□□□□ -0.33
SREBF1-203ENST00000395751 NCKAP5O14513 1909 aa13.01□□□□□ -0.33
SREBF1-203ENST00000395751 ZNF22P17026 224 aaPredicted RBP13□□□□□ -0.33
SREBF1-203ENST00000395751 NDUFC2-KCTD14E9PQ53 114 aa13□□□□□ -0.33
SREBF1-203ENST00000395751 LST1O00453 97 aa13□□□□□ -0.33
SREBF1-203ENST00000395751 PRB1P04280 392 aa13□□□□□ -0.33
SREBF1-203ENST00000395751 ATP5EP2Q5VTU8 51 aa13□□□□□ -0.33
SREBF1-203ENST00000395751 HRCT1Q6UXD1 115 aa13□□□□□ -0.33
SREBF1-203ENST00000395751 IGHV7-81A0A0B4J1V7 117 aa13□□□□□ -0.33
SREBF1-203ENST00000395751 TMEM223A0PJW6 202 aa13□□□□□ -0.33
SREBF1-203ENST00000395751 CXCL5P42830 114 aa13□□□□□ -0.33
SREBF1-203ENST00000395751 UBE2D3P61077 147 aa13□□□□□ -0.33
SREBF1-203ENST00000395751 UBE2D2P62837 147 aa13□□□□□ -0.33
SREBF1-203ENST00000395751 FAM19A5Q7Z5A7 132 aaPredicted RBP13□□□□□ -0.33
SREBF1-203ENST00000395751 COX7B2Q8TF08 81 aa13□□□□□ -0.33
SREBF1-203ENST00000395751 TNRC6BQ9UPQ9 1833 aaKnown RBP12.99□□□□□ -0.33
SREBF1-203ENST00000395751 COL4A4P53420 1690 aaPredicted RBP12.99□□□□□ -0.33
SREBF1-203ENST00000395751 TANC2Q9HCD6 1990 aa12.99□□□□□ -0.33
SREBF1-203ENST00000395751 IGLV1-47P01700 117 aa12.99□□□□□ -0.33
SREBF1-203ENST00000395751 GATA3P23771 443 aa12.99□□□□□ -0.33
SREBF1-203ENST00000395751 A0A1W2PRX2 142 aa12.99□□□□□ -0.33
SREBF1-203ENST00000395751 UPK3BQ9BT76 320 aa12.99□□□□□ -0.33
SREBF1-203ENST00000395751 TMEM256-PLSCR3K7ERE1 68 aa12.98□□□□□ -0.33
SREBF1-203ENST00000395751 LINC00574Q9H8X3 128 aa12.98□□□□□ -0.33
SREBF1-203ENST00000395751 PRR14LQ5THK1 2151 aa12.98□□□□□ -0.33
SREBF1-203ENST00000395751 DAZAP2Q15038 168 aaPredicted RBP12.98□□□□□ -0.33
SREBF1-203ENST00000395751 FANCD2OSQ96PS1 177 aa12.98□□□□□ -0.33
SREBF1-203ENST00000395751 DAD1P61803 113 aa12.97□□□□□ -0.33
SREBF1-203ENST00000395751 ZMAT4Q9H898 229 aa12.97□□□□□ -0.33
SREBF1-203ENST00000395751 H7C423 109 aa12.97□□□□□ -0.33
SREBF1-203ENST00000395751 TRBV12-3P01733 135 aa12.97□□□□□ -0.33
SREBF1-203ENST00000395751 CSDC2Q9Y534 153 aaKnown RBP12.97□□□□□ -0.33
SREBF1-203ENST00000395751 MIR7-3HGQ8N6C7 128 aa12.96□□□□□ -0.33
SREBF1-203ENST00000395751 NRACQ8N912 160 aa12.96□□□□□ -0.33
SREBF1-203ENST00000395751 WNK1Q9H4A3 2382 aa12.96□□□□□ -0.34
SREBF1-203ENST00000395751 Q6ZS46 218 aa12.96□□□□□ -0.34
SREBF1-203ENST00000395751 PPDPFQ9H3Y8 114 aa12.95□□□□□ -0.34
SREBF1-203ENST00000395751 C5orf38Q86SI9 138 aa12.95□□□□□ -0.34
SREBF1-203ENST00000395751 MPLKIPQ8TAP9 179 aa12.95□□□□□ -0.34
SREBF1-203ENST00000395751 TMEM263Q8WUH6 116 aaKnown RBP12.95□□□□□ -0.34
SREBF1-203ENST00000395751 A0A096LNJ9 63 aa12.94□□□□□ -0.34
SREBF1-203ENST00000395751 TMEM131Q92545 1883 aa12.94□□□□□ -0.34
SREBF1-203ENST00000395751 DEFB130BP0DP73 79 aa12.94□□□□□ -0.34
SREBF1-203ENST00000395751 DEFB130AP0DP74 79 aa12.94□□□□□ -0.34
SREBF1-203ENST00000395751 WFDC11Q8NEX6 87 aa12.94□□□□□ -0.34
SREBF1-203ENST00000395751 NRGNQ92686 78 aa12.94□□□□□ -0.34
SREBF1-203ENST00000395751 H3BUA1 57 aa12.94□□□□□ -0.34
SREBF1-203ENST00000395751 MRPL55Q7Z7F7 128 aaKnown RBP12.94□□□□□ -0.34
SREBF1-203ENST00000395751 BPESC1Q9GZL8 116 aa12.94□□□□□ -0.34
SREBF1-203ENST00000395751 U3KQE9 123 aa12.94□□□□□ -0.34
SREBF1-203ENST00000395751 H3BQ85 93 aa12.93□□□□□ -0.34
SREBF1-203ENST00000395751 PDE6GP18545 87 aa12.93□□□□□ -0.34
SREBF1-203ENST00000395751 CFHR3Q02985 330 aa12.93□□□□□ -0.34
SREBF1-203ENST00000395751 C1orf195Q5TG92 126 aa12.93□□□□□ -0.34
SREBF1-203ENST00000395751 RUSC1-AS1Q66K80 236 aa12.93□□□□□ -0.34
SREBF1-203ENST00000395751 NAV3Q8IVL0 2385 aa12.93□□□□□ -0.34
SREBF1-203ENST00000395751 GAS8-AS1O95177 125 aa12.92□□□□□ -0.34
SREBF1-203ENST00000395751 FAM215AQ9Y5M1 114 aa12.92□□□□□ -0.34
SREBF1-203ENST00000395751 KIAA1549LQ6ZVL6 1849 aa12.92□□□□□ -0.34
SREBF1-203ENST00000395751 LINC00308Q8TCZ7 52 aa12.92□□□□□ -0.34
SREBF1-203ENST00000395751 RPL35AP18077 110 aaKnown RBP12.92□□□□□ -0.34
SREBF1-203ENST00000395751 NREPQ16612 68 aa12.92□□□□□ -0.34
SREBF1-203ENST00000395751 SRCAPQ6ZRS2 3230 aa12.92□□□□□ -0.34
SREBF1-203ENST00000395751 CEMP1Q6PRD7 247 aaPredicted RBP12.91□□□□□ -0.34
SREBF1-203ENST00000395751 DPH3Q96FX2 82 aa12.91□□□□□ -0.34
SREBF1-203ENST00000395751 CRIP2P52943 208 aaPredicted RBP12.91□□□□□ -0.34
SREBF1-203ENST00000395751 ENHOQ6UWT2 76 aa12.91□□□□□ -0.34
SREBF1-203ENST00000395751 XCL1P47992 114 aa12.91□□□□□ -0.34
SREBF1-203ENST00000395751 WFDC9Q8NEX5 89 aa12.91□□□□□ -0.34
SREBF1-203ENST00000395751 DEFB1P60022 68 aa12.9□□□□□ -0.34
SREBF1-203ENST00000395751 CNFNQ9BYD5 112 aa12.9□□□□□ -0.34
SREBF1-203ENST00000395751 AGRNO00468 2067 aa12.9□□□□□ -0.34
SREBF1-203ENST00000395751 IGLV4-3A0A075B6K6 122 aa12.9□□□□□ -0.34
SREBF1-203ENST00000395751 NSUN5P1Q3KNT7 163 aa12.9□□□□□ -0.34
SREBF1-203ENST00000395751 TIRAPP58753 221 aa12.9□□□□□ -0.34
SREBF1-203ENST00000395751 MSMPQ1L6U9 139 aa12.89□□□□□ -0.35
SREBF1-203ENST00000395751 SMIM26A0A096LP01 95 aa12.89□□□□□ -0.35
SREBF1-203ENST00000395751 NDUFC1O43677 76 aa12.89□□□□□ -0.35
SREBF1-203ENST00000395751 LOC107984640A0A0U1RRK4 108 aa12.88□□□□□ -0.35
SREBF1-203ENST00000395751 C11orf44Q8N8P7 122 aa12.88□□□□□ -0.35
SREBF1-203ENST00000395751 Q8N9W7 124 aa12.88□□□□□ -0.35
SREBF1-203ENST00000395751 CDKN2A-AS1Q9UH64 79 aa12.88□□□□□ -0.35
SREBF1-203ENST00000395751 ZNF561-AS1K7EIQ3 104 aa12.88□□□□□ -0.35
SREBF1-203ENST00000395751 ATP5EP56381 51 aaPredicted RBP12.88□□□□□ -0.35
SREBF1-203ENST00000395751 B4DSR2 109 aa12.88□□□□□ -0.35
SREBF1-203ENST00000395751 FUSP35637 526 aaKnown RBP eCLIP12.87□□□□□ -0.35
SREBF1-203ENST00000395751 TIMM17BO60830 172 aa12.86□□□□□ -0.35
SREBF1-203ENST00000395751 ATG2AQ2TAZ0 1938 aa12.86□□□□□ -0.35
SREBF1-203ENST00000395751 ARHGAP32A7KAX9 2087 aa12.86□□□□□ -0.35
SREBF1-203ENST00000395751 TRBV27A0A0K0K1C4 114 aa12.86□□□□□ -0.35
SREBF1-203ENST00000395751 NUP210LQ5VU65 1888 aa12.86□□□□□ -0.35
SREBF1-203ENST00000395751 EML5Q05BV3 1969 aa12.85□□□□□ -0.35
SREBF1-203ENST00000395751 KLK5Q9Y337 293 aaPredicted RBP12.85□□□□□ -0.35
SREBF1-203ENST00000395751 MP68P56378 58 aa12.85□□□□□ -0.35
SREBF1-203ENST00000395751 AJUBAQ96IF1 538 aa12.85□□□□□ -0.35
SREBF1-203ENST00000395751 C20orf173Q96LM9 149 aa12.85□□□□□ -0.35
SREBF1-203ENST00000395751 PRB2P02812 416 aaPredicted RBP12.85□□□□□ -0.35
SREBF1-203ENST00000395751 COX6B1P14854 86 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 83.3 ms