RNA–Protein interactions for RNA: ENST00000394947.7

SIN3A-202, Transcript of SIN3 transcription regulator family member A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIN3A, Length 6,737 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIN3A-202ENST00000394947 C11orf45Q8TAV5 145 aa9.39□□□□□ -0.91
SIN3A-202ENST00000394947 TP73-AS1Q9UF72 201 aa9.39□□□□□ -0.91
SIN3A-202ENST00000394947 WFDC13Q8IUB5 93 aa9.39□□□□□ -0.91
SIN3A-202ENST00000394947 FAM30AQ9NZY2 134 aa9.39□□□□□ -0.91
SIN3A-202ENST00000394947 ZFAND3Q9H8U3 227 aa9.39□□□□□ -0.91
SIN3A-202ENST00000394947 SMAD5-AS1Q9Y6J3 95 aa9.39□□□□□ -0.91
SIN3A-202ENST00000394947 C16orf54Q6UWD8 224 aa9.39□□□□□ -0.91
SIN3A-202ENST00000394947 LINC00311Q8N616 119 aa9.39□□□□□ -0.91
SIN3A-202ENST00000394947 CRYGDP07320 174 aa9.38□□□□□ -0.91
SIN3A-202ENST00000394947 XAGE1AQ9HD64 81 aa9.38□□□□□ -0.91
SIN3A-202ENST00000394947 I3L2K1 104 aa9.38□□□□□ -0.91
SIN3A-202ENST00000394947 JMJD7-PLA2G4BH0Y9G9 81 aa9.38□□□□□ -0.91
SIN3A-202ENST00000394947 WT1P19544 449 aaPredicted RBP9.38□□□□□ -0.91
SIN3A-202ENST00000394947 A6NED7 52 aa9.38□□□□□ -0.91
SIN3A-202ENST00000394947 TRIOBPQ9H2D6 2365 aa9.37□□□□□ -0.91
SIN3A-202ENST00000394947 UBE2D1P51668 147 aa9.37□□□□□ -0.91
SIN3A-202ENST00000394947 C17orf82Q86X59 251 aaPredicted RBP9.37□□□□□ -0.91
SIN3A-202ENST00000394947 MT-ATP8P03928 68 aa9.37□□□□□ -0.91
SIN3A-202ENST00000394947 UNQ9165/PRO28630Q6UXU0 137 aa9.37□□□□□ -0.91
SIN3A-202ENST00000394947 C5orf56Q8N8D9 126 aa9.37□□□□□ -0.91
SIN3A-202ENST00000394947 K7EIM0 57 aa9.37□□□□□ -0.91
SIN3A-202ENST00000394947 IGLC6P0CF74 106 aa9.37□□□□□ -0.91
SIN3A-202ENST00000394947 IGF2-ASQ6U949 168 aa9.37□□□□□ -0.91
SIN3A-202ENST00000394947 LY6G6EA0A0G2JKS1 128 aa9.37□□□□□ -0.91
SIN3A-202ENST00000394947 C22orf34Q6ZV56 151 aa9.37□□□□□ -0.91
SIN3A-202ENST00000394947 NANOS2P60321 138 aaKnown RBP9.36□□□□□ -0.91
SIN3A-202ENST00000394947 RSPO1Q2MKA7 263 aaPredicted RBP9.36□□□□□ -0.91
SIN3A-202ENST00000394947 RPL37AP8A6NKH3 93 aa9.36□□□□□ -0.91
SIN3A-202ENST00000394947 PATE2Q6UY27 113 aa9.36□□□□□ -0.91
SIN3A-202ENST00000394947 H3BUA1 57 aa9.35□□□□□ -0.91
SIN3A-202ENST00000394947 NCOR1P1Q9H4R4 102 aa9.35□□□□□ -0.91
SIN3A-202ENST00000394947 REG3AQ06141 175 aa9.35□□□□□ -0.91
SIN3A-202ENST00000394947 SLX1AQ9BQ83 275 aa9.35□□□□□ -0.91
SIN3A-202ENST00000394947 PKDREJQ9NTG1 2253 aa9.35□□□□□ -0.91
SIN3A-202ENST00000394947 KIAA1671Q9BY89 1806 aa9.35□□□□□ -0.91
SIN3A-202ENST00000394947 FAM236DA0A1B0GTK5 79 aa9.35□□□□□ -0.91
SIN3A-202ENST00000394947 FAM236CP0DP71 79 aa9.35□□□□□ -0.91
SIN3A-202ENST00000394947 NOTCH3Q9UM47 2321 aa9.35□□□□□ -0.91
SIN3A-202ENST00000394947 LINC00482Q8N8I6 264 aa9.35□□□□□ -0.91
SIN3A-202ENST00000394947 C1orf147Q96MC9 270 aaPredicted RBP9.35□□□□□ -0.91
SIN3A-202ENST00000394947 E7EUB6 86 aa9.35□□□□□ -0.91
SIN3A-202ENST00000394947 IGLV1-44P01699 117 aa9.35□□□□□ -0.91
SIN3A-202ENST00000394947 IGHV1-58A0A0C4DH39 117 aa9.34□□□□□ -0.91
SIN3A-202ENST00000394947 LINC01545Q5VT33 79 aa9.34□□□□□ -0.91
SIN3A-202ENST00000394947 C9orf85Q96MD7 179 aa9.34□□□□□ -0.91
SIN3A-202ENST00000394947 PLA2G2EQ9NZK7 142 aa9.34□□□□□ -0.91
SIN3A-202ENST00000394947 UBE2D3P61077 147 aa9.34□□□□□ -0.91
SIN3A-202ENST00000394947 Q6ZTI0 123 aa9.34□□□□□ -0.91
SIN3A-202ENST00000394947 VWA8A3KMH1 1905 aa9.34□□□□□ -0.91
SIN3A-202ENST00000394947 C10orf91Q5T1B1 145 aa9.34□□□□□ -0.91
SIN3A-202ENST00000394947 U3KQA8 63 aa9.34□□□□□ -0.91
SIN3A-202ENST00000394947 PRR15LQ9BU68 103 aa9.34□□□□□ -0.91
SIN3A-202ENST00000394947 TRBV6-1A0A0K0K1D8 114 aa9.33□□□□□ -0.92
SIN3A-202ENST00000394947 C11orf53Q8IXP5 236 aa9.33□□□□□ -0.92
SIN3A-202ENST00000394947 WDR90Q96KV7 1748 aa9.33□□□□□ -0.92
SIN3A-202ENST00000394947 OBSL1O75147 1896 aa9.33□□□□□ -0.92
SIN3A-202ENST00000394947 IGLV11-55A0A075B6I3 123 aa9.33□□□□□ -0.92
SIN3A-202ENST00000394947 E9PLD3 99 aa9.33□□□□□ -0.92
SIN3A-202ENST00000394947 C4orf3Q8WVX3 66 aa9.32□□□□□ -0.92
SIN3A-202ENST00000394947 LINC00467Q9BRT7 94 aa9.32□□□□□ -0.92
SIN3A-202ENST00000394947 FAM240AA0A1B0GVK7 77 aa9.32□□□□□ -0.92
SIN3A-202ENST00000394947 PROK1P58294 105 aa9.32□□□□□ -0.92
SIN3A-202ENST00000394947 NDUFA11Q86Y39 141 aa9.32□□□□□ -0.92
SIN3A-202ENST00000394947 CHCHD10Q8WYQ3 142 aaPredicted RBP9.32□□□□□ -0.92
SIN3A-202ENST00000394947 NDUFC2-KCTD14E9PQ53 114 aa9.31□□□□□ -0.92
SIN3A-202ENST00000394947 ZFAND2AQ8N6M9 145 aa9.31□□□□□ -0.92
SIN3A-202ENST00000394947 A8MZ25 164 aa9.31□□□□□ -0.92
SIN3A-202ENST00000394947 KAAG1Q9UBP8 84 aa9.31□□□□□ -0.92
SIN3A-202ENST00000394947 SERP1Q9Y6X1 66 aa9.31□□□□□ -0.92
SIN3A-202ENST00000394947 TNCP24821 2201 aa9.31□□□□□ -0.92
SIN3A-202ENST00000394947 ROS1P08922 2347 aa9.31□□□□□ -0.92
SIN3A-202ENST00000394947 MAP6D1Q9H9H5 199 aa9.31□□□□□ -0.92
SIN3A-202ENST00000394947 FNDC1Q4ZHG4 1894 aaPredicted RBP9.31□□□□□ -0.92
SIN3A-202ENST00000394947 SIPA1L1O43166 1804 aa9.31□□□□□ -0.92
SIN3A-202ENST00000394947 THSD7AQ9UPZ6 1657 aa9.31□□□□□ -0.92
SIN3A-202ENST00000394947 KIR2DL5BA0A0G2JN68 375 aa9.31□□□□□ -0.92
SIN3A-202ENST00000394947 KIR2DL5BA0A0G2JPC4 375 aa9.31□□□□□ -0.92
SIN3A-202ENST00000394947 FAM222AQ5U5X8 452 aa9.31□□□□□ -0.92
SIN3A-202ENST00000394947 KIR2DL5AQ8N109 375 aa9.31□□□□□ -0.92
SIN3A-202ENST00000394947 ODF1Q14990 250 aa9.3□□□□□ -0.92
SIN3A-202ENST00000394947 V9GYY9 64 aa9.3□□□□□ -0.92
SIN3A-202ENST00000394947 MIAQ16674 131 aa9.3□□□□□ -0.92
SIN3A-202ENST00000394947 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP9.3□□□□□ -0.92
SIN3A-202ENST00000394947 SPANXCQ9NY87 97 aa9.3□□□□□ -0.92
SIN3A-202ENST00000394947 LY6G6CO95867 125 aa9.3□□□□□ -0.92
SIN3A-202ENST00000394947 DEFB131BA0A096LNP1 70 aa9.3□□□□□ -0.92
SIN3A-202ENST00000394947 DNAJC9-AS1A6NH13 148 aa9.3□□□□□ -0.92
SIN3A-202ENST00000394947 A0A0J9YXY3 114 aa9.29□□□□□ -0.92
SIN3A-202ENST00000394947 TRBV10-1A0A0K0K1A3 114 aa9.29□□□□□ -0.92
SIN3A-202ENST00000394947 Q8NFD4 153 aa9.29□□□□□ -0.92
SIN3A-202ENST00000394947 LINC01548A6NM66 108 aa9.29□□□□□ -0.92
SIN3A-202ENST00000394947 PRO0255Q9UI72 69 aa9.29□□□□□ -0.92
SIN3A-202ENST00000394947 ADAMTS9Q9P2N4 1935 aa9.29□□□□□ -0.92
SIN3A-202ENST00000394947 CXCL5P42830 114 aa9.28□□□□□ -0.92
SIN3A-202ENST00000394947 H3BQ85 93 aa9.28□□□□□ -0.92
SIN3A-202ENST00000394947 SPATA12Q7Z6I5 190 aa9.28□□□□□ -0.92
SIN3A-202ENST00000394947 COA6Q5JTJ3 125 aaKnown RBP9.28□□□□□ -0.92
SIN3A-202ENST00000394947 IGF1P05019 195 aa9.28□□□□□ -0.92
SIN3A-202ENST00000394947 CCKP06307 115 aa9.28□□□□□ -0.92
SIN3A-202ENST00000394947 PRM2P04554 102 aa9.27□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 68.6 ms