RNA–Protein interactions for RNA: ENST00000394872.6

COL4A6-203, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 5 BASIC

Gene COL4A6, Length 6,750 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-203ENST00000394872 HILS1P60008 231 aa7.91□□□□□ -1.14
COL4A6-203ENST00000394872 DENND4AQ7Z401 1863 aa7.9□□□□□ -1.14
COL4A6-203ENST00000394872 IGKV2-24A0A0C4DH68 120 aa7.9□□□□□ -1.14
COL4A6-203ENST00000394872 ANKRD39Q53RE8 183 aa7.9□□□□□ -1.14
COL4A6-203ENST00000394872 ODF3BA8MYP8 253 aa7.9□□□□□ -1.14
COL4A6-203ENST00000394872 CCDC140Q96MF4 163 aa7.9□□□□□ -1.14
COL4A6-203ENST00000394872 MP68P56378 58 aa7.9□□□□□ -1.14
COL4A6-203ENST00000394872 LINC01548A6NM66 108 aa7.9□□□□□ -1.15
COL4A6-203ENST00000394872 ZNF843Q8N446 348 aa7.9□□□□□ -1.15
COL4A6-203ENST00000394872 NACAE9PAV3 2078 aa7.9□□□□□ -1.15
COL4A6-203ENST00000394872 A0A0B4J2C4 111 aa7.9□□□□□ -1.15
COL4A6-203ENST00000394872 IGKV3D-7A0A0C4DH55 119 aa7.89□□□□□ -1.15
COL4A6-203ENST00000394872 A0A1B0GX51 115 aa7.89□□□□□ -1.15
COL4A6-203ENST00000394872 C11orf86A6NJI1 115 aa7.89□□□□□ -1.15
COL4A6-203ENST00000394872 PRB2P02812 416 aaPredicted RBP7.89□□□□□ -1.15
COL4A6-203ENST00000394872 TRBV6-1A0A0K0K1D8 114 aa7.89□□□□□ -1.15
COL4A6-203ENST00000394872 WFDC9Q8NEX5 89 aa7.89□□□□□ -1.15
COL4A6-203ENST00000394872 MIR7-3HGQ8N6C7 128 aa7.89□□□□□ -1.15
COL4A6-203ENST00000394872 RNASE8Q8TDE3 154 aaKnown RBP7.89□□□□□ -1.15
COL4A6-203ENST00000394872 NOTCH3Q9UM47 2321 aa7.89□□□□□ -1.15
COL4A6-203ENST00000394872 TP53TG3Q9ULZ0 132 aa7.89□□□□□ -1.15
COL4A6-203ENST00000394872 LECT2O14960 151 aa7.88□□□□□ -1.15
COL4A6-203ENST00000394872 CHD3Q12873 2000 aaKnown RBP7.88□□□□□ -1.15
COL4A6-203ENST00000394872 CACNA1HO95180 2353 aa7.88□□□□□ -1.15
COL4A6-203ENST00000394872 TRBV10-1A0A0K0K1A3 114 aa7.88□□□□□ -1.15
COL4A6-203ENST00000394872 NUPR1O60356 82 aa7.88□□□□□ -1.15
COL4A6-203ENST00000394872 FAM222AQ5U5X8 452 aa7.88□□□□□ -1.15
COL4A6-203ENST00000394872 TNRC6AQ8NDV7 1962 aaKnown RBP7.88□□□□□ -1.15
COL4A6-203ENST00000394872 E9PLD3 99 aa7.88□□□□□ -1.15
COL4A6-203ENST00000394872 CRYGDP07320 174 aa7.88□□□□□ -1.15
COL4A6-203ENST00000394872 P0DMU3 169 aa7.88□□□□□ -1.15
COL4A6-203ENST00000394872 FAM231AP0DMU4 169 aa7.88□□□□□ -1.15
COL4A6-203ENST00000394872 FAM231CP0DMU5 169 aa7.88□□□□□ -1.15
COL4A6-203ENST00000394872 Q6ZTI0 123 aa7.88□□□□□ -1.15
COL4A6-203ENST00000394872 FAM110AQ9BQ89 295 aa7.88□□□□□ -1.15
COL4A6-203ENST00000394872 C14orf132Q9NPU4 83 aa7.88□□□□□ -1.15
COL4A6-203ENST00000394872 TNRC6BQ9UPQ9 1833 aaKnown RBP7.88□□□□□ -1.15
COL4A6-203ENST00000394872 DEFB131BA0A096LNP1 70 aa7.87□□□□□ -1.15
COL4A6-203ENST00000394872 LINC00269Q8N2A0 174 aa7.87□□□□□ -1.15
COL4A6-203ENST00000394872 IGHV1-58A0A0C4DH39 117 aa7.87□□□□□ -1.15
COL4A6-203ENST00000394872 KIR2DL5BA0A0G2JN68 375 aa7.87□□□□□ -1.15
COL4A6-203ENST00000394872 KIR2DL5BA0A0G2JPC4 375 aa7.87□□□□□ -1.15
COL4A6-203ENST00000394872 LGALS9O00182 355 aa7.87□□□□□ -1.15
COL4A6-203ENST00000394872 PSMB8P28062 276 aa7.87□□□□□ -1.15
COL4A6-203ENST00000394872 SHISA2Q6UWI4 295 aa7.87□□□□□ -1.15
COL4A6-203ENST00000394872 KIR2DL5AQ8N109 375 aa7.87□□□□□ -1.15
COL4A6-203ENST00000394872 Q6ZUT4 128 aa7.87□□□□□ -1.15
COL4A6-203ENST00000394872 SPATA25Q9BR10 227 aa7.87□□□□□ -1.15
COL4A6-203ENST00000394872 CEMP1Q6PRD7 247 aaPredicted RBP7.87□□□□□ -1.15
COL4A6-203ENST00000394872 LYRM9A8MSI8 78 aa7.87□□□□□ -1.15
COL4A6-203ENST00000394872 H0Y9J4 135 aa7.87□□□□□ -1.15
COL4A6-203ENST00000394872 PLA2G2EQ9NZK7 142 aa7.87□□□□□ -1.15
COL4A6-203ENST00000394872 LINC01620Q4KN68 170 aa7.86□□□□□ -1.15
COL4A6-203ENST00000394872 LYPD6Q86Y78 171 aa7.86□□□□□ -1.15
COL4A6-203ENST00000394872 LRCOL1A6NCL2 159 aa7.86□□□□□ -1.15
COL4A6-203ENST00000394872 REG3AQ06141 175 aa7.86□□□□□ -1.15
COL4A6-203ENST00000394872 JMJD7-PLA2G4BH0Y9G9 81 aa7.86□□□□□ -1.15
COL4A6-203ENST00000394872 DEFB114Q30KQ6 69 aa7.86□□□□□ -1.15
COL4A6-203ENST00000394872 CLEC2BQ92478 149 aa7.86□□□□□ -1.15
COL4A6-203ENST00000394872 ZNF106Q9H2Y7 1883 aaKnown RBP7.86□□□□□ -1.15
COL4A6-203ENST00000394872 OBSL1O75147 1896 aa7.86□□□□□ -1.15
COL4A6-203ENST00000394872 LY6G6DO95868 133 aa7.86□□□□□ -1.15
COL4A6-203ENST00000394872 COX7BP24311 80 aa7.86□□□□□ -1.15
COL4A6-203ENST00000394872 SMIM9A6NGZ8 99 aa7.86□□□□□ -1.15
COL4A6-203ENST00000394872 NFE4Q86UQ8 179 aa7.85□□□□□ -1.15
COL4A6-203ENST00000394872 C20orf203Q8NBC4 194 aa7.85□□□□□ -1.15
COL4A6-203ENST00000394872 FXYD2P54710 66 aa7.85□□□□□ -1.15
COL4A6-203ENST00000394872 LTBP2Q14767 1821 aa7.85□□□□□ -1.15
COL4A6-203ENST00000394872 IGF1P05019 195 aa7.85□□□□□ -1.15
COL4A6-203ENST00000394872 TTTY13Q9BZ97 58 aa7.85□□□□□ -1.15
COL4A6-203ENST00000394872 ZFAND2AQ8N6M9 145 aa7.85□□□□□ -1.15
COL4A6-203ENST00000394872 SVIPQ8NHG7 77 aa7.85□□□□□ -1.15
COL4A6-203ENST00000394872 IGKV1D-37A0A075B6S9 117 aa7.85□□□□□ -1.15
COL4A6-203ENST00000394872 TMEM256-PLSCR3K7ERE1 68 aa7.85□□□□□ -1.15
COL4A6-203ENST00000394872 LINC00482Q8N8I6 264 aa7.84□□□□□ -1.15
COL4A6-203ENST00000394872 HIGD1BQ9P298 99 aa7.84□□□□□ -1.15
COL4A6-203ENST00000394872 FAM236AA0A1B0GUQ0 79 aa7.84□□□□□ -1.15
COL4A6-203ENST00000394872 FAM236BA0A1B0GV22 79 aa7.84□□□□□ -1.15
COL4A6-203ENST00000394872 ODF3Q96PU9 254 aa7.84□□□□□ -1.15
COL4A6-203ENST00000394872 COA6Q5JTJ3 125 aaKnown RBP7.84□□□□□ -1.15
COL4A6-203ENST00000394872 Q6ZSV7 163 aa7.84□□□□□ -1.15
COL4A6-203ENST00000394872 ATOX1O00244 68 aa7.83□□□□□ -1.16
COL4A6-203ENST00000394872 HIGD2AQ9BW72 106 aa7.83□□□□□ -1.16
COL4A6-203ENST00000394872 KIAA1549LQ6ZVL6 1849 aa7.83□□□□□ -1.16
COL4A6-203ENST00000394872 ODF1Q14990 250 aa7.83□□□□□ -1.16
COL4A6-203ENST00000394872 UFSP1Q6NVU6 142 aa7.83□□□□□ -1.16
COL4A6-203ENST00000394872 TECTAO75443 2155 aa7.83□□□□□ -1.16
COL4A6-203ENST00000394872 COL4A3Q01955 1670 aa7.83□□□□□ -1.16
COL4A6-203ENST00000394872 C19orf71A6NCJ1 209 aa7.83□□□□□ -1.16
COL4A6-203ENST00000394872 ZNF80P51504 273 aaPredicted RBP7.83□□□□□ -1.16
COL4A6-203ENST00000394872 BRK1Q8WUW1 75 aa7.83□□□□□ -1.16
COL4A6-203ENST00000394872 HIST2H2BDQ6DRA6 164 aa7.83□□□□□ -1.16
COL4A6-203ENST00000394872 K7EQG2 157 aa7.82□□□□□ -1.16
COL4A6-203ENST00000394872 TDRG1Q3Y452 100 aa7.82□□□□□ -1.16
COL4A6-203ENST00000394872 CHCHD10Q8WYQ3 142 aaPredicted RBP7.82□□□□□ -1.16
COL4A6-203ENST00000394872 A0A087WZ39 114 aa7.82□□□□□ -1.16
COL4A6-203ENST00000394872 C22orf34Q6ZV56 151 aa7.82□□□□□ -1.16
COL4A6-203ENST00000394872 C20orf173Q96LM9 149 aa7.82□□□□□ -1.16
COL4A6-203ENST00000394872 TRBV10-2A0A0K0K1G8 114 aa7.82□□□□□ -1.16
COL4A6-203ENST00000394872 COL4A4P53420 1690 aaPredicted RBP7.82□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 149.6 ms