RNA–Protein interactions for RNA: ENST00000394435.2

PRDM5-202, Transcript of PR/SET domain 5, humanhuman

TSL 1 (best) BASIC

Gene PRDM5, Length 2,492 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM5-202ENST00000394435 RBMY1DP0C7P1 496 aaKnown RBP12.24□□□□□ -0.45
PRDM5-202ENST00000394435 P0DMU3 169 aa12.24□□□□□ -0.45
PRDM5-202ENST00000394435 FAM231AP0DMU4 169 aa12.24□□□□□ -0.45
PRDM5-202ENST00000394435 FAM231CP0DMU5 169 aa12.24□□□□□ -0.45
PRDM5-202ENST00000394435 HERVK_113P61574 105 aa12.24□□□□□ -0.45
PRDM5-202ENST00000394435 KHDC1LQ5JSQ8 128 aa12.24□□□□□ -0.45
PRDM5-202ENST00000394435 TMEM170BQ5T4T1 132 aa12.24□□□□□ -0.45
PRDM5-202ENST00000394435 USP24Q9UPU5 2620 aa12.24□□□□□ -0.45
PRDM5-202ENST00000394435 IGHV3-73A0A0B4J1V6 119 aa12.23□□□□□ -0.45
PRDM5-202ENST00000394435 NSUN5P1Q3KNT7 163 aa12.23□□□□□ -0.45
PRDM5-202ENST00000394435 Q8N2B8 174 aa12.23□□□□□ -0.45
PRDM5-202ENST00000394435 RHOHQ15669 191 aa12.23□□□□□ -0.45
PRDM5-202ENST00000394435 MXRA5Q9NR99 2828 aa12.23□□□□□ -0.45
PRDM5-202ENST00000394435 H3BMM0 161 aa12.22□□□□□ -0.45
PRDM5-202ENST00000394435 TMEM61Q8N0U2 210 aa12.22□□□□□ -0.45
PRDM5-202ENST00000394435 A0A1B0GWB2 263 aa12.22□□□□□ -0.45
PRDM5-202ENST00000394435 I3L3M4 83 aa12.22□□□□□ -0.45
PRDM5-202ENST00000394435 PROK1P58294 105 aa12.22□□□□□ -0.45
PRDM5-202ENST00000394435 PRRC2AP48634 2157 aaKnown RBP12.22□□□□□ -0.45
PRDM5-202ENST00000394435 TSPEAR-AS2P59090 65 aa12.21□□□□□ -0.45
PRDM5-202ENST00000394435 SRSF9Q13242 221 aaKnown RBP eCLIP12.21□□□□□ -0.45
PRDM5-202ENST00000394435 RRN3P1Q2M238 152 aa12.21□□□□□ -0.45
PRDM5-202ENST00000394435 C20orf203Q8NBC4 194 aa12.21□□□□□ -0.45
PRDM5-202ENST00000394435 DLX4Q92988 240 aaPredicted RBP12.21□□□□□ -0.45
PRDM5-202ENST00000394435 CENPEQ02224 2701 aa12.21□□□□□ -0.46
PRDM5-202ENST00000394435 PEMTQ9UBM1 199 aa12.2□□□□□ -0.46
PRDM5-202ENST00000394435 LRRK2Q5S007 2527 aa12.2□□□□□ -0.46
PRDM5-202ENST00000394435 C4orf3Q8WVX3 66 aa12.2□□□□□ -0.46
PRDM5-202ENST00000394435 A8MTW9 85 aa12.19□□□□□ -0.46
PRDM5-202ENST00000394435 LRRC75A-AS1Q8N1F1 130 aa12.19□□□□□ -0.46
PRDM5-202ENST00000394435 PTPN13Q12923 2485 aa12.19□□□□□ -0.46
PRDM5-202ENST00000394435 A0A0J9YY99 117 aa12.19□□□□□ -0.46
PRDM5-202ENST00000394435 G3V4G9 280 aa12.19□□□□□ -0.46
PRDM5-202ENST00000394435 KRTAP1-3Q8IUG1 177 aa12.18□□□□□ -0.46
PRDM5-202ENST00000394435 DYNLRB2Q8TF09 96 aa12.18□□□□□ -0.46
PRDM5-202ENST00000394435 MAP6D1Q9H9H5 199 aa12.18□□□□□ -0.46
PRDM5-202ENST00000394435 UBR5O95071 2799 aaPredicted RBP12.18□□□□□ -0.46
PRDM5-202ENST00000394435 H3BMG7 143 aa12.17□□□□□ -0.46
PRDM5-202ENST00000394435 NFE4Q86UQ8 179 aa12.17□□□□□ -0.46
PRDM5-202ENST00000394435 TEX15Q9BXT5 2789 aa12.17□□□□□ -0.46
PRDM5-202ENST00000394435 RPL24P83731 157 aaKnown RBP12.17□□□□□ -0.46
PRDM5-202ENST00000394435 PGPEP1Q9NXJ5 209 aa12.17□□□□□ -0.46
PRDM5-202ENST00000394435 IGLV4-3A0A075B6K6 122 aa12.16□□□□□ -0.46
PRDM5-202ENST00000394435 TRAV2A0A0B4J234 112 aa12.16□□□□□ -0.46
PRDM5-202ENST00000394435 J3QQQ9 107 aa12.16□□□□□ -0.46
PRDM5-202ENST00000394435 M0R2P5 195 aa12.16□□□□□ -0.46
PRDM5-202ENST00000394435 Q9UF83 564 aa12.16□□□□□ -0.46
PRDM5-202ENST00000394435 WFDC2Q14508 124 aa12.16□□□□□ -0.46
PRDM5-202ENST00000394435 ABCA12Q86UK0 2595 aa12.16□□□□□ -0.46
PRDM5-202ENST00000394435 CREBBPQ92793 2442 aa12.16□□□□□ -0.46
PRDM5-202ENST00000394435 NAV2Q8IVL1 2488 aa12.15□□□□□ -0.46
PRDM5-202ENST00000394435 TMEM238LA0A1B0GVL6 79 aa12.15□□□□□ -0.46
PRDM5-202ENST00000394435 A6NJY4 79 aa12.15□□□□□ -0.46
PRDM5-202ENST00000394435 LGALS3P17931 250 aaKnown RBP12.15□□□□□ -0.46
PRDM5-202ENST00000394435 DEFB114Q30KQ6 69 aa12.15□□□□□ -0.46
PRDM5-202ENST00000394435 Q6ZSN1 163 aa12.15□□□□□ -0.46
PRDM5-202ENST00000394435 AMELXQ99217 191 aa12.15□□□□□ -0.46
PRDM5-202ENST00000394435 SPAG8Q99932 426 aaPredicted RBP12.15□□□□□ -0.46
PRDM5-202ENST00000394435 A0A0J9YXV3 536 aa12.15□□□□□ -0.46
PRDM5-202ENST00000394435 TMEM223A0PJW6 202 aa12.15□□□□□ -0.46
PRDM5-202ENST00000394435 UBE2D1P51668 147 aa12.15□□□□□ -0.46
PRDM5-202ENST00000394435 ZNF415Q09FC8 603 aa12.15□□□□□ -0.46
PRDM5-202ENST00000394435 LINC01587Q99440 93 aa12.15□□□□□ -0.46
PRDM5-202ENST00000394435 VCX2Q9H322 139 aa12.15□□□□□ -0.46
PRDM5-202ENST00000394435 MRPL16Q9NX20 251 aaKnown RBP12.15□□□□□ -0.46
PRDM5-202ENST00000394435 IGHV3-64A0A075B6Q5 118 aa12.14□□□□□ -0.47
PRDM5-202ENST00000394435 APOMO95445 188 aa12.14□□□□□ -0.47
PRDM5-202ENST00000394435 Q6ZSV7 163 aa12.14□□□□□ -0.47
PRDM5-202ENST00000394435 EDA2RQ9HAV5 297 aa12.14□□□□□ -0.47
PRDM5-202ENST00000394435 TNFRSF18Q9Y5U5 241 aa12.14□□□□□ -0.47
PRDM5-202ENST00000394435 TEX48A0A1B0GUV7 120 aa12.14□□□□□ -0.47
PRDM5-202ENST00000394435 A8MWV9 139 aa12.14□□□□□ -0.47
PRDM5-202ENST00000394435 CD28P10747 220 aa12.14□□□□□ -0.47
PRDM5-202ENST00000394435 ZNF22P17026 224 aaPredicted RBP12.14□□□□□ -0.47
PRDM5-202ENST00000394435 MTURNQ8N3F0 131 aa12.14□□□□□ -0.47
PRDM5-202ENST00000394435 CEMP1Q6PRD7 247 aaPredicted RBP12.13□□□□□ -0.47
PRDM5-202ENST00000394435 RAX2Q96IS3 184 aa12.13□□□□□ -0.47
PRDM5-202ENST00000394435 F8W1H4 67 aa12.13□□□□□ -0.47
PRDM5-202ENST00000394435 RHODO00212 210 aa12.13□□□□□ -0.47
PRDM5-202ENST00000394435 LEPROTO15243 131 aa12.13□□□□□ -0.47
PRDM5-202ENST00000394435 C11orf44Q8N8P7 122 aa12.13□□□□□ -0.47
PRDM5-202ENST00000394435 SLC25A29Q8N8R3 303 aa12.13□□□□□ -0.47
PRDM5-202ENST00000394435 SPANXB1Q9NS25 103 aaPredicted RBP12.13□□□□□ -0.47
PRDM5-202ENST00000394435 NACAE9PAV3 2078 aa12.13□□□□□ -0.47
PRDM5-202ENST00000394435 IGHV3-30P01768 117 aa12.12□□□□□ -0.47
PRDM5-202ENST00000394435 IGHV3-30-5P0DP03 117 aa12.12□□□□□ -0.47
PRDM5-202ENST00000394435 CFAP126Q5VTH2 177 aa12.12□□□□□ -0.47
PRDM5-202ENST00000394435 SFTA2Q6UW10 78 aa12.12□□□□□ -0.47
PRDM5-202ENST00000394435 FAM104AQ969W3 186 aa12.12□□□□□ -0.47
PRDM5-202ENST00000394435 C11orf72Q8NBR9 251 aa12.12□□□□□ -0.47
PRDM5-202ENST00000394435 A0A1W2PRX2 142 aa12.11□□□□□ -0.47
PRDM5-202ENST00000394435 TSPAN13O95857 204 aa12.11□□□□□ -0.47
PRDM5-202ENST00000394435 GAGE13Q4V321 117 aa12.11□□□□□ -0.47
PRDM5-202ENST00000394435 RNASE13Q5GAN3 156 aaKnown RBP12.11□□□□□ -0.47
PRDM5-202ENST00000394435 WFDC11Q8NEX6 87 aa12.11□□□□□ -0.47
PRDM5-202ENST00000394435 DNAJC9-AS1A6NH13 148 aa12.1□□□□□ -0.47
PRDM5-202ENST00000394435 INSP01308 110 aa12.1□□□□□ -0.47
PRDM5-202ENST00000394435 NDUFA11Q86Y39 141 aa12.1□□□□□ -0.47
PRDM5-202ENST00000394435 PYGO1Q9Y3Y4 419 aa12.1□□□□□ -0.47
PRDM5-202ENST00000394435 SH2D6Q7Z4S9 175 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 79.6 ms