RNA–Protein interactions for RNA: ENST00000394253.7

USP49-203, Transcript of ubiquitin specific peptidase 49, humanhuman

APPRIS P1 TSL 5 BASIC

Gene USP49, Length 9,034 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP49-203ENST00000394253 J3QLI3 93 aa10.53□□□□□ -0.72
USP49-203ENST00000394253 K7EN84 100 aa10.53□□□□□ -0.72
USP49-203ENST00000394253 MT-ATP8P03928 68 aa10.53□□□□□ -0.72
USP49-203ENST00000394253 A0A0G2JRQ6 117 aa10.52□□□□□ -0.73
USP49-203ENST00000394253 SMIM26A0A096LP01 95 aa10.52□□□□□ -0.73
USP49-203ENST00000394253 SERTAD4-AS1Q5TG53 156 aa10.52□□□□□ -0.73
USP49-203ENST00000394253 SPART-AS1P0CW21 52 aa10.51□□□□□ -0.73
USP49-203ENST00000394253 CSRP3P50461 194 aa10.51□□□□□ -0.73
USP49-203ENST00000394253 BPESC1Q9GZL8 116 aa10.51□□□□□ -0.73
USP49-203ENST00000394253 MLANAQ16655 118 aa10.51□□□□□ -0.73
USP49-203ENST00000394253 MIR7-3HGQ8N6C7 128 aa10.5□□□□□ -0.73
USP49-203ENST00000394253 FAM222AQ5U5X8 452 aa10.5□□□□□ -0.73
USP49-203ENST00000394253 GATA1P15976 413 aaPredicted RBP10.5□□□□□ -0.73
USP49-203ENST00000394253 SPAG11BQ08648 103 aa10.5□□□□□ -0.73
USP49-203ENST00000394253 ZNF491Q8N8L2 437 aa10.5□□□□□ -0.73
USP49-203ENST00000394253 A0A0J9YY99 117 aa10.49□□□□□ -0.73
USP49-203ENST00000394253 CD59P13987 128 aa10.49□□□□□ -0.73
USP49-203ENST00000394253 GNRH2O43555 120 aa10.49□□□□□ -0.73
USP49-203ENST00000394253 C5orf24Q7Z6I8 188 aa10.49□□□□□ -0.73
USP49-203ENST00000394253 C9orf85Q96MD7 179 aa10.49□□□□□ -0.73
USP49-203ENST00000394253 TGFBR3LH3BV60 316 aa10.49□□□□□ -0.73
USP49-203ENST00000394253 HHLA3Q9XRX5 114 aa10.49□□□□□ -0.73
USP49-203ENST00000394253 LMO1P25800 156 aa10.49□□□□□ -0.73
USP49-203ENST00000394253 PKD1L2Q7Z442 2459 aa10.49□□□□□ -0.73
USP49-203ENST00000394253 ZNF726P1Q15940 193 aa10.48□□□□□ -0.73
USP49-203ENST00000394253 ODF1Q14990 250 aa10.48□□□□□ -0.73
USP49-203ENST00000394253 LINC00311Q8N616 119 aa10.48□□□□□ -0.73
USP49-203ENST00000394253 DEFB112Q30KQ8 113 aa10.47□□□□□ -0.73
USP49-203ENST00000394253 COX7CP15954 63 aa10.47□□□□□ -0.73
USP49-203ENST00000394253 CRIPAKQ8N1N5 446 aa10.47□□□□□ -0.73
USP49-203ENST00000394253 SP5Q6BEB4 398 aaPredicted RBP10.47□□□□□ -0.73
USP49-203ENST00000394253 Q8NFD4 153 aa10.47□□□□□ -0.73
USP49-203ENST00000394253 A0A0G2JNJ9 132 aa10.47□□□□□ -0.73
USP49-203ENST00000394253 LOXL1Q08397 574 aaPredicted RBP10.47□□□□□ -0.73
USP49-203ENST00000394253 Q9UFV3 132 aa10.47□□□□□ -0.73
USP49-203ENST00000394253 LINC00205P59089 165 aa10.47□□□□□ -0.73
USP49-203ENST00000394253 TDRG1Q3Y452 100 aa10.47□□□□□ -0.73
USP49-203ENST00000394253 WT1-ASQ06250 92 aa10.46□□□□□ -0.73
USP49-203ENST00000394253 TRBV27A0A0K0K1C4 114 aa10.46□□□□□ -0.73
USP49-203ENST00000394253 Q8TCH9 128 aa10.46□□□□□ -0.74
USP49-203ENST00000394253 G3V318 75 aa10.46□□□□□ -0.74
USP49-203ENST00000394253 SNURFQ9Y675 71 aa10.46□□□□□ -0.74
USP49-203ENST00000394253 IGLV3-19P01714 112 aa10.46□□□□□ -0.74
USP49-203ENST00000394253 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP10.45□□□□□ -0.74
USP49-203ENST00000394253 PRYO14603 147 aa10.45□□□□□ -0.74
USP49-203ENST00000394253 A0A0J9YXV3 536 aa10.45□□□□□ -0.74
USP49-203ENST00000394253 LYPD2Q6UXB3 125 aa10.45□□□□□ -0.74
USP49-203ENST00000394253 SPTBN4Q9H254 2564 aa10.45□□□□□ -0.74
USP49-203ENST00000394253 K7ENP7 123 aa10.45□□□□□ -0.74
USP49-203ENST00000394253 UFSP1Q6NVU6 142 aa10.45□□□□□ -0.74
USP49-203ENST00000394253 UBE2D2P62837 147 aa10.45□□□□□ -0.74
USP49-203ENST00000394253 CCL24O00175 119 aa10.44□□□□□ -0.74
USP49-203ENST00000394253 IGLV3-9A0A075B6K5 115 aa10.44□□□□□ -0.74
USP49-203ENST00000394253 CDPF1Q6NVV7 123 aa10.44□□□□□ -0.74
USP49-203ENST00000394253 P0DMU3 169 aa10.44□□□□□ -0.74
USP49-203ENST00000394253 FAM231AP0DMU4 169 aa10.44□□□□□ -0.74
USP49-203ENST00000394253 FAM231CP0DMU5 169 aa10.44□□□□□ -0.74
USP49-203ENST00000394253 CTRLP40313 264 aa10.44□□□□□ -0.74
USP49-203ENST00000394253 MDFICQ9P1T7 246 aa10.43□□□□□ -0.74
USP49-203ENST00000394253 SPRY4Q9C004 299 aa10.43□□□□□ -0.74
USP49-203ENST00000394253 C9orf66Q5T8R8 295 aa10.43□□□□□ -0.74
USP49-203ENST00000394253 IGHV3-30-3P0DP02 117 aa10.43□□□□□ -0.74
USP49-203ENST00000394253 MED14OSP0DP75 135 aa10.43□□□□□ -0.74
USP49-203ENST00000394253 RPL39P62891 51 aaKnown RBP10.43□□□□□ -0.74
USP49-203ENST00000394253 RUSC1-AS1Q66K80 236 aa10.43□□□□□ -0.74
USP49-203ENST00000394253 MTORP42345 2549 aa10.43□□□□□ -0.74
USP49-203ENST00000394253 CCKP06307 115 aa10.41□□□□□ -0.74
USP49-203ENST00000394253 RNF138Q8WVD3 245 aa10.41□□□□□ -0.74
USP49-203ENST00000394253 YPEL4Q96NS1 127 aa10.41□□□□□ -0.74
USP49-203ENST00000394253 CSDC2Q9Y534 153 aaKnown RBP10.41□□□□□ -0.74
USP49-203ENST00000394253 IGHV3-30P01768 117 aa10.41□□□□□ -0.74
USP49-203ENST00000394253 IGHV3-33P01772 117 aa10.41□□□□□ -0.74
USP49-203ENST00000394253 IGHV3-30-5P0DP03 117 aa10.41□□□□□ -0.74
USP49-203ENST00000394253 MIFP14174 115 aa10.41□□□□□ -0.74
USP49-203ENST00000394253 COL8A2P25067 703 aa10.4□□□□□ -0.74
USP49-203ENST00000394253 ZNF524Q96C55 264 aa10.4□□□□□ -0.74
USP49-203ENST00000394253 WFDC10AQ9H1F0 79 aa10.4□□□□□ -0.74
USP49-203ENST00000394253 AGPAT4-IT1Q9H0P7 198 aa10.4□□□□□ -0.74
USP49-203ENST00000394253 VPREB3Q9UKI3 123 aa10.4□□□□□ -0.74
USP49-203ENST00000394253 IGKV1-6A0A0C4DH72 117 aa10.4□□□□□ -0.74
USP49-203ENST00000394253 KLK5Q9Y337 293 aaPredicted RBP10.4□□□□□ -0.74
USP49-203ENST00000394253 NPBQ8NG41 125 aa10.4□□□□□ -0.75
USP49-203ENST00000394253 GTSF1Q8WW33 167 aa10.4□□□□□ -0.75
USP49-203ENST00000394253 A0A0J9YWU9 116 aa10.39□□□□□ -0.75
USP49-203ENST00000394253 H7C423 109 aa10.39□□□□□ -0.75
USP49-203ENST00000394253 SPATA12Q7Z6I5 190 aa10.39□□□□□ -0.75
USP49-203ENST00000394253 RNF185Q96GF1 192 aa10.39□□□□□ -0.75
USP49-203ENST00000394253 C17orf58Q2M2W7 97 aa10.39□□□□□ -0.75
USP49-203ENST00000394253 LINC00694P0DN24 101 aa10.38□□□□□ -0.75
USP49-203ENST00000394253 NRACQ8N912 160 aa10.38□□□□□ -0.75
USP49-203ENST00000394253 F8W735 103 aaPredicted RBP10.38□□□□□ -0.75
USP49-203ENST00000394253 M0QXV9 152 aa10.38□□□□□ -0.75
USP49-203ENST00000394253 ABCA12Q86UK0 2595 aa10.38□□□□□ -0.75
USP49-203ENST00000394253 TMEM223A0PJW6 202 aa10.38□□□□□ -0.75
USP49-203ENST00000394253 TMEM263Q8WUH6 116 aaKnown RBP10.38□□□□□ -0.75
USP49-203ENST00000394253 RNF223E7ERA6 249 aa10.38□□□□□ -0.75
USP49-203ENST00000394253 ZFAND3Q9H8U3 227 aa10.37□□□□□ -0.75
USP49-203ENST00000394253 GPHB5Q86YW7 130 aa10.37□□□□□ -0.75
USP49-203ENST00000394253 UBE2D4Q9Y2X8 147 aa10.37□□□□□ -0.75
USP49-203ENST00000394253 LY6DQ14210 128 aa10.37□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 76.7 ms