RNA–Protein interactions for RNA: ENST00000394221.2

DHFR2-202, Transcript of dihydrofolate reductase 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DHFR2, Length 4,038 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DHFR2-202ENST00000394221 NDUFA12Q9UI09 145 aa6.4□□□□□ -1.38
DHFR2-202ENST00000394221 IGHV4-4A0A075B6R2 117 aa6.4□□□□□ -1.39
DHFR2-202ENST00000394221 BUB3O43684 328 aa6.4□□□□□ -1.39
DHFR2-202ENST00000394221 PSMG3-AS1Q96PY0 264 aa6.4□□□□□ -1.39
DHFR2-202ENST00000394221 C11orf21Q9P2W6 132 aa6.4□□□□□ -1.39
DHFR2-202ENST00000394221 TNRC18O15417 2968 aaPredicted RBP6.4□□□□□ -1.39
DHFR2-202ENST00000394221 VCYO14598 125 aa6.4□□□□□ -1.39
DHFR2-202ENST00000394221 ZNF575Q86XF7 245 aa6.4□□□□□ -1.39
DHFR2-202ENST00000394221 SAP25Q8TEE9 199 aa6.4□□□□□ -1.39
DHFR2-202ENST00000394221 VSIG2Q96IQ7 327 aa6.4□□□□□ -1.39
DHFR2-202ENST00000394221 F5H697 171 aa6.39□□□□□ -1.39
DHFR2-202ENST00000394221 FOLR3P41439 243 aa6.39□□□□□ -1.39
DHFR2-202ENST00000394221 PMAIP1Q13794 54 aa6.39□□□□□ -1.39
DHFR2-202ENST00000394221 NACAE9PAV3 2078 aa6.39□□□□□ -1.39
DHFR2-202ENST00000394221 TRAV23DV6A0A075B6W5 121 aa6.39□□□□□ -1.39
DHFR2-202ENST00000394221 FAM222AQ5U5X8 452 aa6.39□□□□□ -1.39
DHFR2-202ENST00000394221 RNF7Q9UBF6 113 aa6.39□□□□□ -1.39
DHFR2-202ENST00000394221 SLC25A15Q9Y619 301 aa6.39□□□□□ -1.39
DHFR2-202ENST00000394221 IGHV3-30-3P0DP02 117 aa6.38□□□□□ -1.39
DHFR2-202ENST00000394221 NDPQ00604 133 aa6.38□□□□□ -1.39
DHFR2-202ENST00000394221 GFRALQ6UXV0 394 aa6.38□□□□□ -1.39
DHFR2-202ENST00000394221 LINC00482Q8N8I6 264 aa6.38□□□□□ -1.39
DHFR2-202ENST00000394221 PRAC2D3DTV9 90 aa6.38□□□□□ -1.39
DHFR2-202ENST00000394221 TIMM17BO60830 172 aa6.38□□□□□ -1.39
DHFR2-202ENST00000394221 CCL3L1P16619 93 aa6.38□□□□□ -1.39
DHFR2-202ENST00000394221 DKK4Q9UBT3 224 aa6.38□□□□□ -1.39
DHFR2-202ENST00000394221 DNAJC13O75165 2243 aa6.38□□□□□ -1.39
DHFR2-202ENST00000394221 IGHV3OR16-10A0A075B7F0 116 aa6.38□□□□□ -1.39
DHFR2-202ENST00000394221 A0A0J9YXV3 536 aa6.38□□□□□ -1.39
DHFR2-202ENST00000394221 S100A7L2Q5SY68 101 aa6.38□□□□□ -1.39
DHFR2-202ENST00000394221 SPINK14Q6IE38 97 aa6.38□□□□□ -1.39
DHFR2-202ENST00000394221 NXPH4O95158 308 aa6.37□□□□□ -1.39
DHFR2-202ENST00000394221 AVPP01185 164 aa6.37□□□□□ -1.39
DHFR2-202ENST00000394221 ROS1P08922 2347 aa6.37□□□□□ -1.39
DHFR2-202ENST00000394221 ADAMTSL4-AS1Q5T5F5 129 aa6.37□□□□□ -1.39
DHFR2-202ENST00000394221 VPS13AQ96RL7 3174 aa6.37□□□□□ -1.39
DHFR2-202ENST00000394221 PTPN13Q12923 2485 aa6.37□□□□□ -1.39
DHFR2-202ENST00000394221 K7EIM0 57 aa6.37□□□□□ -1.39
DHFR2-202ENST00000394221 FP248Q71RG6 208 aaPredicted RBP6.37□□□□□ -1.39
DHFR2-202ENST00000394221 GAFA1Q96PS6 74 aa6.37□□□□□ -1.39
DHFR2-202ENST00000394221 C16orf95Q9H693 158 aa6.37□□□□□ -1.39
DHFR2-202ENST00000394221 C14orf132Q9NPU4 83 aa6.37□□□□□ -1.39
DHFR2-202ENST00000394221 TRANK1O15050 2925 aa6.37□□□□□ -1.39
DHFR2-202ENST00000394221 IGHV1-2P23083 117 aa6.36□□□□□ -1.39
DHFR2-202ENST00000394221 UBE2D4Q9Y2X8 147 aa6.36□□□□□ -1.39
DHFR2-202ENST00000394221 EPM2AB3EWF7 344 aa6.36□□□□□ -1.39
DHFR2-202ENST00000394221 TEX22C9J3V5 150 aa6.36□□□□□ -1.39
DHFR2-202ENST00000394221 IGLV3-19P01714 112 aa6.36□□□□□ -1.39
DHFR2-202ENST00000394221 LINC00574Q9H8X3 128 aa6.36□□□□□ -1.39
DHFR2-202ENST00000394221 IGHV1-69P01742 117 aa6.36□□□□□ -1.39
DHFR2-202ENST00000394221 OPRPNQ99935 248 aaPredicted RBP6.36□□□□□ -1.39
DHFR2-202ENST00000394221 ZNF580Q9UK33 172 aa6.36□□□□□ -1.39
DHFR2-202ENST00000394221 SPG11Q96JI7 2443 aa6.36□□□□□ -1.39
DHFR2-202ENST00000394221 DSCAMO60469 2012 aa6.36□□□□□ -1.39
DHFR2-202ENST00000394221 PRSS33Q8NF86 280 aa6.35□□□□□ -1.39
DHFR2-202ENST00000394221 LITAFQ99732 161 aa6.35□□□□□ -1.39
DHFR2-202ENST00000394221 LINC00846Q9NV44 126 aa6.35□□□□□ -1.39
DHFR2-202ENST00000394221 CREBBPQ92793 2442 aa6.35□□□□□ -1.39
DHFR2-202ENST00000394221 TRBV7-6A0A0J9YX20 115 aa6.35□□□□□ -1.39
DHFR2-202ENST00000394221 SOCS3O14543 225 aa6.35□□□□□ -1.39
DHFR2-202ENST00000394221 TRBV12-3P01733 135 aa6.35□□□□□ -1.39
DHFR2-202ENST00000394221 MPLKIPQ8TAP9 179 aa6.35□□□□□ -1.39
DHFR2-202ENST00000394221 Q9HAA7 133 aa6.35□□□□□ -1.39
DHFR2-202ENST00000394221 LINC00474Q9P2X8 69 aa6.35□□□□□ -1.39
DHFR2-202ENST00000394221 PRR14LQ5THK1 2151 aa6.35□□□□□ -1.39
DHFR2-202ENST00000394221 WDFY4Q6ZS81 3184 aa6.35□□□□□ -1.39
DHFR2-202ENST00000394221 HILS1P60008 231 aa6.34□□□□□ -1.39
DHFR2-202ENST00000394221 IGHV3OR16-8A0A075B7F1 116 aa6.34□□□□□ -1.39
DHFR2-202ENST00000394221 SS18Q15532 418 aa6.34□□□□□ -1.39
DHFR2-202ENST00000394221 CNEP1R1Q8N9A8 125 aa6.34□□□□□ -1.39
DHFR2-202ENST00000394221 TLN1Q9Y490 2541 aaKnown RBP6.34□□□□□ -1.39
DHFR2-202ENST00000394221 H7BZZ5 65 aa6.34□□□□□ -1.39
DHFR2-202ENST00000394221 IGHV5-10-1A0A0J9YXX1 117 aa6.34□□□□□ -1.4
DHFR2-202ENST00000394221 RNF223E7ERA6 249 aa6.34□□□□□ -1.4
DHFR2-202ENST00000394221 BUB1B-PAK6H3BSN5 160 aa6.34□□□□□ -1.4
DHFR2-202ENST00000394221 TTTY12Q9BZ98 90 aa6.34□□□□□ -1.4
DHFR2-202ENST00000394221 SNRPD3P62318 126 aaKnown RBP6.33□□□□□ -1.4
DHFR2-202ENST00000394221 MRGPRG-AS1Q2M3A8 158 aa6.33□□□□□ -1.4
DHFR2-202ENST00000394221 OVOL2Q9BRP0 275 aa6.33□□□□□ -1.4
DHFR2-202ENST00000394221 IGHV1-58A0A0C4DH39 117 aa6.33□□□□□ -1.4
DHFR2-202ENST00000394221 LHBP01229 141 aa6.33□□□□□ -1.4
DHFR2-202ENST00000394221 GPHB5Q86YW7 130 aa6.33□□□□□ -1.4
DHFR2-202ENST00000394221 RNASE6Q93091 150 aaKnown RBP6.33□□□□□ -1.4
DHFR2-202ENST00000394221 U3KQE9 123 aa6.33□□□□□ -1.4
DHFR2-202ENST00000394221 USP34Q70CQ2 3546 aa6.33□□□□□ -1.4
DHFR2-202ENST00000394221 TMEM89A2RUT3 159 aa6.33□□□□□ -1.4
DHFR2-202ENST00000394221 F8WEM9 126 aa6.33□□□□□ -1.4
DHFR2-202ENST00000394221 IGHV3-23P01764 117 aa6.33□□□□□ -1.4
DHFR2-202ENST00000394221 CCKP06307 115 aa6.33□□□□□ -1.4
DHFR2-202ENST00000394221 HOXD3P31249 432 aaPredicted RBP6.33□□□□□ -1.4
DHFR2-202ENST00000394221 ATP5EP2Q5VTU8 51 aa6.33□□□□□ -1.4
DHFR2-202ENST00000394221 HES7Q9BYE0 225 aa6.33□□□□□ -1.4
DHFR2-202ENST00000394221 SMAD5-AS1Q9Y6J3 95 aa6.33□□□□□ -1.4
DHFR2-202ENST00000394221 TRAV21A0A0B4J279 112 aa6.32□□□□□ -1.4
DHFR2-202ENST00000394221 TRBV27A0A0K0K1C4 114 aa6.32□□□□□ -1.4
DHFR2-202ENST00000394221 CD28P10747 220 aa6.32□□□□□ -1.4
DHFR2-202ENST00000394221 RPL28P46779 137 aaKnown RBP6.32□□□□□ -1.4
DHFR2-202ENST00000394221 FAM19A1Q7Z5A9 133 aa6.32□□□□□ -1.4
DHFR2-202ENST00000394221 IGHV3-35A0A0C4DH35 117 aa6.32□□□□□ -1.4
DHFR2-202ENST00000394221 ATP5EP56381 51 aaPredicted RBP6.32□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms