RNA–Protein interactions for RNA: ENST00000394181.6

CLDND1-203, Transcript of claudin domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene CLDND1, Length 2,170 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-203ENST00000394181 PLAC8L1A1L4L8 177 aa13.71□□□□□ -0.21
CLDND1-203ENST00000394181 Q6ZTI0 123 aa13.71□□□□□ -0.21
CLDND1-203ENST00000394181 TMEM263Q8WUH6 116 aaKnown RBP13.71□□□□□ -0.21
CLDND1-203ENST00000394181 TRBV6-5A0A0K0K1A5 114 aa13.71□□□□□ -0.22
CLDND1-203ENST00000394181 C20orf202A1L168 122 aa13.71□□□□□ -0.22
CLDND1-203ENST00000394181 NOP10Q9NPE3 64 aaKnown RBP13.71□□□□□ -0.22
CLDND1-203ENST00000394181 PIK3CD-AS1Q5SR53 167 aa13.7□□□□□ -0.22
CLDND1-203ENST00000394181 C1QTNF4Q9BXJ3 329 aa13.7□□□□□ -0.22
CLDND1-203ENST00000394181 ORMDL2Q53FV1 153 aa13.69□□□□□ -0.22
CLDND1-203ENST00000394181 DKK2Q9UBU2 259 aa13.69□□□□□ -0.22
CLDND1-203ENST00000394181 VCYO14598 125 aa13.69□□□□□ -0.22
CLDND1-203ENST00000394181 RS1O15537 224 aa13.69□□□□□ -0.22
CLDND1-203ENST00000394181 RPL32P62910 135 aaKnown RBP13.69□□□□□ -0.22
CLDND1-203ENST00000394181 TRBV27A0A0K0K1C4 114 aa13.68□□□□□ -0.22
CLDND1-203ENST00000394181 ZFP2Q6ZN57 461 aa13.68□□□□□ -0.22
CLDND1-203ENST00000394181 IGHV3-53P01767 116 aa13.67□□□□□ -0.22
CLDND1-203ENST00000394181 PRSS1P07477 247 aa13.67□□□□□ -0.22
CLDND1-203ENST00000394181 TOMM6Q96B49 74 aa13.67□□□□□ -0.22
CLDND1-203ENST00000394181 C14orf144Q96I85 54 aa13.67□□□□□ -0.22
CLDND1-203ENST00000394181 ZNF479Q96JC4 524 aa13.67□□□□□ -0.22
CLDND1-203ENST00000394181 LGALS9BQ3B8N2 356 aa13.66□□□□□ -0.22
CLDND1-203ENST00000394181 LGALS9CQ6DKI2 356 aa13.66□□□□□ -0.22
CLDND1-203ENST00000394181 C2orf66Q6UXQ4 117 aa13.66□□□□□ -0.22
CLDND1-203ENST00000394181 C3orf56Q8N813 242 aa13.66□□□□□ -0.22
CLDND1-203ENST00000394181 TP73-AS1Q9UF72 201 aa13.66□□□□□ -0.22
CLDND1-203ENST00000394181 RPL39P62891 51 aaKnown RBP13.65□□□□□ -0.22
CLDND1-203ENST00000394181 RRN3P1Q2M238 152 aa13.65□□□□□ -0.22
CLDND1-203ENST00000394181 OXLD1Q5BKU9 147 aa13.65□□□□□ -0.22
CLDND1-203ENST00000394181 K7EMI3 77 aa13.65□□□□□ -0.22
CLDND1-203ENST00000394181 IGLC3P0DOY3 106 aa13.65□□□□□ -0.22
CLDND1-203ENST00000394181 OR4C5Q8NGB2 326 aa13.65□□□□□ -0.22
CLDND1-203ENST00000394181 C16orf74Q96GX8 76 aa13.65□□□□□ -0.22
CLDND1-203ENST00000394181 SCGB3A1Q96QR1 104 aa13.65□□□□□ -0.22
CLDND1-203ENST00000394181 KIR2DL4Q99706 377 aa13.65□□□□□ -0.22
CLDND1-203ENST00000394181 MIEN1Q9BRT3 115 aa13.65□□□□□ -0.22
CLDND1-203ENST00000394181 COL6A5A8TX70 2615 aa13.64□□□□□ -0.23
CLDND1-203ENST00000394181 TSHBP01222 138 aa13.64□□□□□ -0.23
CLDND1-203ENST00000394181 EMP1P54849 157 aa13.64□□□□□ -0.23
CLDND1-203ENST00000394181 DAZ2Q13117 558 aaKnown RBP13.64□□□□□ -0.23
CLDND1-203ENST00000394181 ODF1Q14990 250 aa13.64□□□□□ -0.23
CLDND1-203ENST00000394181 NDUFAF3Q9BU61 184 aa13.64□□□□□ -0.23
CLDND1-203ENST00000394181 EDA2RQ9HAV5 297 aa13.64□□□□□ -0.23
CLDND1-203ENST00000394181 ATP5LO75964 103 aa13.64□□□□□ -0.23
CLDND1-203ENST00000394181 GAGE12BA1L429 117 aa13.63□□□□□ -0.23
CLDND1-203ENST00000394181 H7C1H1 209 aa13.63□□□□□ -0.23
CLDND1-203ENST00000394181 WIPF1O43516 503 aa13.63□□□□□ -0.23
CLDND1-203ENST00000394181 GAGE7O76087 117 aa13.63□□□□□ -0.23
CLDND1-203ENST00000394181 GAGE12FP0CL80 117 aa13.63□□□□□ -0.23
CLDND1-203ENST00000394181 GAGE12GP0CL81 117 aa13.63□□□□□ -0.23
CLDND1-203ENST00000394181 GAGE12IP0CL82 117 aa13.63□□□□□ -0.23
CLDND1-203ENST00000394181 TCTAP57738 103 aa13.63□□□□□ -0.23
CLDND1-203ENST00000394181 NEXN-AS1Q8NBZ9 246 aa13.63□□□□□ -0.23
CLDND1-203ENST00000394181 TP53TG1Q9Y2A0 90 aa13.63□□□□□ -0.23
CLDND1-203ENST00000394181 RHODO00212 210 aa13.62□□□□□ -0.23
CLDND1-203ENST00000394181 DEFA6Q01524 100 aa13.62□□□□□ -0.23
CLDND1-203ENST00000394181 STPG4Q8N801 248 aa13.62□□□□□ -0.23
CLDND1-203ENST00000394181 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP13.62□□□□□ -0.23
CLDND1-203ENST00000394181 I3L3M4 83 aa13.61□□□□□ -0.23
CLDND1-203ENST00000394181 TNFRSF18Q9Y5U5 241 aa13.61□□□□□ -0.23
CLDND1-203ENST00000394181 ANK2Q01484 3957 aa13.61□□□□□ -0.23
CLDND1-203ENST00000394181 X6R8D5 127 aa13.61□□□□□ -0.23
CLDND1-203ENST00000394181 ZC2HC1BQ5TFG8 222 aa13.6□□□□□ -0.23
CLDND1-203ENST00000394181 OVOL2Q9BRP0 275 aa13.6□□□□□ -0.23
CLDND1-203ENST00000394181 KRTAP10-11P60412 298 aa13.59□□□□□ -0.23
CLDND1-203ENST00000394181 ANKRD39Q53RE8 183 aa13.59□□□□□ -0.23
CLDND1-203ENST00000394181 MRPL35Q9NZE8 188 aaKnown RBP13.59□□□□□ -0.23
CLDND1-203ENST00000394181 CYSLTR1Q9Y271 337 aa13.59□□□□□ -0.23
CLDND1-203ENST00000394181 IGHV3-38A0A0C4DH36 116 aa13.59□□□□□ -0.23
CLDND1-203ENST00000394181 IGIPA6NJ69 53 aa13.59□□□□□ -0.23
CLDND1-203ENST00000394181 C12orf54Q6X4T0 127 aa13.59□□□□□ -0.23
CLDND1-203ENST00000394181 ERASQ7Z444 233 aa13.59□□□□□ -0.23
CLDND1-203ENST00000394181 BAALCQ8WXS3 180 aa13.59□□□□□ -0.23
CLDND1-203ENST00000394181 ZMAT4Q9H898 229 aa13.59□□□□□ -0.23
CLDND1-203ENST00000394181 TRAV4A0A0B4J268 109 aa13.58□□□□□ -0.24
CLDND1-203ENST00000394181 HSBP1L1C9JCN9 74 aa13.58□□□□□ -0.24
CLDND1-203ENST00000394181 RIPPLY3P57055 190 aa13.58□□□□□ -0.24
CLDND1-203ENST00000394181 DEFB135Q30KP9 77 aa13.58□□□□□ -0.24
CLDND1-203ENST00000394181 SHISA2Q6UWI4 295 aa13.58□□□□□ -0.24
CLDND1-203ENST00000394181 Q6ZN92 141 aa13.58□□□□□ -0.24
CLDND1-203ENST00000394181 PHLDA1Q8WV24 401 aaPredicted RBP13.58□□□□□ -0.24
CLDND1-203ENST00000394181 TRGV2A0A075B6R0 118 aa13.58□□□□□ -0.24
CLDND1-203ENST00000394181 UQCR10Q9UDW1 63 aa13.58□□□□□ -0.24
CLDND1-203ENST00000394181 OPRPNQ99935 248 aaPredicted RBP13.57□□□□□ -0.24
CLDND1-203ENST00000394181 HHLA3Q9XRX5 114 aa13.57□□□□□ -0.24
CLDND1-203ENST00000394181 A0A087WX48 190 aa13.56□□□□□ -0.24
CLDND1-203ENST00000394181 IGHV4-30-4P0DP06 118 aa13.56□□□□□ -0.24
CLDND1-203ENST00000394181 SLC25A29Q8N8R3 303 aa13.56□□□□□ -0.24
CLDND1-203ENST00000394181 RHOHQ15669 191 aa13.55□□□□□ -0.24
CLDND1-203ENST00000394181 DEFB4AO15263 64 aa13.55□□□□□ -0.24
CLDND1-203ENST00000394181 IGKCP01834 107 aa13.55□□□□□ -0.24
CLDND1-203ENST00000394181 CTAG1AP78358 180 aa13.55□□□□□ -0.24
CLDND1-203ENST00000394181 C20orf203Q8NBC4 194 aa13.55□□□□□ -0.24
CLDND1-203ENST00000394181 ZNRF2Q8NHG8 242 aa13.55□□□□□ -0.24
CLDND1-203ENST00000394181 PRSS29PA6NIE9 313 aa13.54□□□□□ -0.24
CLDND1-203ENST00000394181 DEFB130BP0DP73 79 aa13.54□□□□□ -0.24
CLDND1-203ENST00000394181 DEFB130AP0DP74 79 aa13.54□□□□□ -0.24
CLDND1-203ENST00000394181 KIR2DL5BQ8NHK3 375 aa13.54□□□□□ -0.24
CLDND1-203ENST00000394181 DPM2O94777 84 aa13.54□□□□□ -0.24
CLDND1-203ENST00000394181 ZMAT5Q9UDW3 170 aaKnown RBP13.54□□□□□ -0.24
CLDND1-203ENST00000394181 TRAV12-1A0A0B4J245 112 aa13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 57.8 ms