RNA–Protein interactions for RNA: ENST00000393794.4

POLR2J-202, Transcript of RNA polymerase II subunit J, humanhuman

TSL 1 (best) BASIC

Gene POLR2J, Length 784 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J-202ENST00000393794 ACTR3CQ9C0K3 210 aaPredicted RBP12.46□□□□□ -0.41
POLR2J-202ENST00000393794 ZNF726P1Q15940 193 aa12.45□□□□□ -0.42
POLR2J-202ENST00000393794 TMEM97Q5BJF2 176 aa12.45□□□□□ -0.42
POLR2J-202ENST00000393794 TRBV6-1A0A0K0K1D8 114 aa12.44□□□□□ -0.42
POLR2J-202ENST00000393794 CLPSL2Q6UWE3 100 aa12.44□□□□□ -0.42
POLR2J-202ENST00000393794 KIF25-AS1Q9Y6Z4 181 aa12.44□□□□□ -0.42
POLR2J-202ENST00000393794 A0A1B0GVG6 124 aa12.43□□□□□ -0.42
POLR2J-202ENST00000393794 hDV102S1A0JD36 115 aa12.43□□□□□ -0.42
POLR2J-202ENST00000393794 FAM74A7A6NL05 159 aa12.43□□□□□ -0.42
POLR2J-202ENST00000393794 IFNA7P01567 189 aa12.43□□□□□ -0.42
POLR2J-202ENST00000393794 IQCJQ1A5X6 159 aa12.43□□□□□ -0.42
POLR2J-202ENST00000393794 SSBP4Q9BWG4 385 aaPredicted RBP12.43□□□□□ -0.42
POLR2J-202ENST00000393794 NKX6-2Q9C056 277 aaPredicted RBP12.43□□□□□ -0.42
POLR2J-202ENST00000393794 hCG_2014768A0A024R1R8 64 aa12.42□□□□□ -0.42
POLR2J-202ENST00000393794 TMSB15BA0A087X1C1 80 aa12.42□□□□□ -0.42
POLR2J-202ENST00000393794 REG3AQ06141 175 aa12.42□□□□□ -0.42
POLR2J-202ENST00000393794 GAGE6Q13070 117 aa12.42□□□□□ -0.42
POLR2J-202ENST00000393794 AKAP14Q86UN6 197 aa12.42□□□□□ -0.42
POLR2J-202ENST00000393794 C20orf203Q8NBC4 194 aa12.42□□□□□ -0.42
POLR2J-202ENST00000393794 TRAV8-4A0A0B4J246 113 aa12.41□□□□□ -0.42
POLR2J-202ENST00000393794 LTAP01374 205 aa12.41□□□□□ -0.42
POLR2J-202ENST00000393794 P01737 135 aa12.41□□□□□ -0.42
POLR2J-202ENST00000393794 PRR3P79522 188 aaKnown RBP12.41□□□□□ -0.42
POLR2J-202ENST00000393794 WDR73Q6P4I2 378 aa12.41□□□□□ -0.42
POLR2J-202ENST00000393794 TCTE3Q8IZS6 198 aa12.41□□□□□ -0.42
POLR2J-202ENST00000393794 OR10AG1Q8NH19 301 aa12.41□□□□□ -0.42
POLR2J-202ENST00000393794 FMC1Q96HJ9 113 aa12.41□□□□□ -0.42
POLR2J-202ENST00000393794 TRAV16A0A0A6YYK6 109 aaPredicted RBP12.4□□□□□ -0.42
POLR2J-202ENST00000393794 SNAI2O43623 268 aa12.4□□□□□ -0.42
POLR2J-202ENST00000393794 GAS8-AS1O95177 125 aa12.4□□□□□ -0.42
POLR2J-202ENST00000393794 CXCL1P09341 107 aa12.4□□□□□ -0.42
POLR2J-202ENST00000393794 ZNF56Q15929 161 aa12.4□□□□□ -0.42
POLR2J-202ENST00000393794 DPH3Q96FX2 82 aa12.4□□□□□ -0.42
POLR2J-202ENST00000393794 AQP10Q96PS8 301 aa12.4□□□□□ -0.42
POLR2J-202ENST00000393794 DERL1Q9BUN8 251 aa12.4□□□□□ -0.42
POLR2J-202ENST00000393794 DPH3P1Q9H4G8 78 aa12.4□□□□□ -0.42
POLR2J-202ENST00000393794 IGLV10-54A0A075B6I4 117 aa12.39□□□□□ -0.43
POLR2J-202ENST00000393794 TRBV25-1A0A075B6N4 114 aa12.39□□□□□ -0.43
POLR2J-202ENST00000393794 A0A1B0GUV1 79 aa12.39□□□□□ -0.43
POLR2J-202ENST00000393794 PFDN1O60925 122 aa12.39□□□□□ -0.43
POLR2J-202ENST00000393794 GZMBP10144 247 aa12.39□□□□□ -0.43
POLR2J-202ENST00000393794 UBE2G2P60604 165 aa12.39□□□□□ -0.43
POLR2J-202ENST00000393794 SREK1IP1Q8N9Q2 155 aaPredicted RBP12.39□□□□□ -0.43
POLR2J-202ENST00000393794 C7orf33Q8WU49 177 aa12.39□□□□□ -0.43
POLR2J-202ENST00000393794 GFRA4Q9GZZ7 299 aa12.39□□□□□ -0.43
POLR2J-202ENST00000393794 CTXND1A0A1B0GTU2 59 aa12.38□□□□□ -0.43
POLR2J-202ENST00000393794 SRSF9Q13242 221 aaKnown RBP eCLIP12.37□□□□□ -0.43
POLR2J-202ENST00000393794 ZNF471Q9BX82 626 aaPredicted RBP12.37□□□□□ -0.43
POLR2J-202ENST00000393794 AP5S1Q9NUS5 200 aa12.37□□□□□ -0.43
POLR2J-202ENST00000393794 IGLV4-60A0A075B6I1 120 aa12.36□□□□□ -0.43
POLR2J-202ENST00000393794 OR5AL1P0C617 328 aa12.36□□□□□ -0.43
POLR2J-202ENST00000393794 C15orf56Q8N910 161 aa12.36□□□□□ -0.43
POLR2J-202ENST00000393794 MUC2Q02817 5179 aa12.36□□□□□ -0.43
POLR2J-202ENST00000393794 IGHV1-24A0A0C4DH33 117 aa12.35□□□□□ -0.43
POLR2J-202ENST00000393794 HMSDA8MTL9 139 aa12.35□□□□□ -0.43
POLR2J-202ENST00000393794 COX6A2Q02221 97 aa12.35□□□□□ -0.43
POLR2J-202ENST00000393794 SPINK6Q6UWN8 80 aa12.35□□□□□ -0.43
POLR2J-202ENST00000393794 TCEAL7Q9BRU2 100 aa12.35□□□□□ -0.43
POLR2J-202ENST00000393794 MUC21A0A0G2JKD1 596 aa12.34□□□□□ -0.43
POLR2J-202ENST00000393794 FHITP49789 147 aa12.34□□□□□ -0.43
POLR2J-202ENST00000393794 INO80EQ8NBZ0 244 aaPredicted RBP12.34□□□□□ -0.43
POLR2J-202ENST00000393794 PRSS3P2Q8NHM4 247 aa12.34□□□□□ -0.43
POLR2J-202ENST00000393794 MLST8Q9BVC4 326 aa12.34□□□□□ -0.43
POLR2J-202ENST00000393794 M0QY20 66 aa12.33□□□□□ -0.44
POLR2J-202ENST00000393794 NDUFS6O75380 124 aaKnown RBP12.33□□□□□ -0.44
POLR2J-202ENST00000393794 UBE2G1P62253 170 aa12.33□□□□□ -0.44
POLR2J-202ENST00000393794 GTSF1Q8WW33 167 aa12.32□□□□□ -0.44
POLR2J-202ENST00000393794 F5H697 171 aa12.31□□□□□ -0.44
POLR2J-202ENST00000393794 RPS10P46783 165 aaKnown RBP12.31□□□□□ -0.44
POLR2J-202ENST00000393794 RPL7L1Q6DKI1 246 aaKnown RBP12.31□□□□□ -0.44
POLR2J-202ENST00000393794 MUC21A0A140T8X8 626 aa12.3□□□□□ -0.44
POLR2J-202ENST00000393794 MAJINQ3KP22 176 aa12.3□□□□□ -0.44
POLR2J-202ENST00000393794 REG3GQ6UW15 175 aa12.3□□□□□ -0.44
POLR2J-202ENST00000393794 RAB5CP51148 216 aa12.29□□□□□ -0.44
POLR2J-202ENST00000393794 Q5BKY6 102 aa12.29□□□□□ -0.44
POLR2J-202ENST00000393794 SPANXN1Q5VSR9 72 aa12.29□□□□□ -0.44
POLR2J-202ENST00000393794 STPG4Q8N801 248 aa12.29□□□□□ -0.44
POLR2J-202ENST00000393794 FXYD6-FXYD2A0A087WZ82 144 aa12.28□□□□□ -0.44
POLR2J-202ENST00000393794 G3V3Q6 166 aa12.28□□□□□ -0.44
POLR2J-202ENST00000393794 ZNF345Q14585 488 aa12.28□□□□□ -0.44
POLR2J-202ENST00000393794 CFAP161Q6P656 301 aa12.27□□□□□ -0.45
POLR2J-202ENST00000393794 PGLYRP4Q96LB8 373 aa12.27□□□□□ -0.45
POLR2J-202ENST00000393794 TMEM243Q9BU79 118 aa12.27□□□□□ -0.45
POLR2J-202ENST00000393794 A0A096LNI7 61 aa12.26□□□□□ -0.45
POLR2J-202ENST00000393794 IGKV2-24A0A0C4DH68 120 aa12.26□□□□□ -0.45
POLR2J-202ENST00000393794 AKR1C3P42330 323 aa12.26□□□□□ -0.45
POLR2J-202ENST00000393794 AP1S3Q96PC3 154 aa12.26□□□□□ -0.45
POLR2J-202ENST00000393794 GVQW2A0A096LPI5 108 aaPredicted RBP12.25□□□□□ -0.45
POLR2J-202ENST00000393794 MAP1LC3B2A6NCE7 125 aa12.25□□□□□ -0.45
POLR2J-202ENST00000393794 SUMO4Q6EEV6 95 aa12.25□□□□□ -0.45
POLR2J-202ENST00000393794 LYPD6BQ8NI32 183 aa12.25□□□□□ -0.45
POLR2J-202ENST00000393794 MAP1LC3BQ9GZQ8 125 aa12.25□□□□□ -0.45
POLR2J-202ENST00000393794 GAGE12HA6NDE8 117 aa12.24□□□□□ -0.45
POLR2J-202ENST00000393794 SMLR1H3BR10 107 aa12.24□□□□□ -0.45
POLR2J-202ENST00000393794 ARPC5O15511 151 aa12.24□□□□□ -0.45
POLR2J-202ENST00000393794 S100A9P06702 114 aaKnown RBP12.24□□□□□ -0.45
POLR2J-202ENST00000393794 SMIM17P0DL12 118 aa12.24□□□□□ -0.45
POLR2J-202ENST00000393794 KCNRGQ8N5I3 272 aa12.24□□□□□ -0.45
POLR2J-202ENST00000393794 BORCS7-ASMTA0A0B4J1R7 106 aa12.23□□□□□ -0.45
POLR2J-202ENST00000393794 EIF5AP63241 154 aaKnown RBP12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms