RNA–Protein interactions for RNA: ENST00000393693.6

SNCB-202, Transcript of synuclein beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNCB, Length 1,234 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCB-202ENST00000393693 PPBPP02775 128 aa13□□□□□ -0.33
SNCB-202ENST00000393693 Q0VG73 95 aa13□□□□□ -0.33
SNCB-202ENST00000393693 AMN1Q8IY45 258 aa13□□□□□ -0.33
SNCB-202ENST00000393693 PTH2Q96A98 100 aa13□□□□□ -0.33
SNCB-202ENST00000393693 ALKBH7Q9BT30 221 aaPredicted RBP13□□□□□ -0.33
SNCB-202ENST00000393693 DPH3P1Q9H4G8 78 aa13□□□□□ -0.33
SNCB-202ENST00000393693 DNAH5Q8TE73 4624 aa12.99□□□□□ -0.33
SNCB-202ENST00000393693 PLAC8L1A1L4L8 177 aa12.99□□□□□ -0.33
SNCB-202ENST00000393693 M0R2P5 195 aa12.99□□□□□ -0.33
SNCB-202ENST00000393693 PIK3CD-AS1Q5SR53 167 aa12.99□□□□□ -0.33
SNCB-202ENST00000393693 C6orf223Q8N319 242 aa12.99□□□□□ -0.33
SNCB-202ENST00000393693 C5orf52A6NGY3 159 aa12.98□□□□□ -0.33
SNCB-202ENST00000393693 RAB4AP20338 218 aa12.98□□□□□ -0.33
SNCB-202ENST00000393693 EVI2AP22794 236 aa12.98□□□□□ -0.33
SNCB-202ENST00000393693 CKS2P33552 79 aa12.98□□□□□ -0.33
SNCB-202ENST00000393693 SNRPEP62304 92 aaKnown RBP12.98□□□□□ -0.33
SNCB-202ENST00000393693 MRPL51Q4U2R6 128 aaKnown RBP12.98□□□□□ -0.33
SNCB-202ENST00000393693 COA6Q5JTJ3 125 aaKnown RBP12.98□□□□□ -0.33
SNCB-202ENST00000393693 BAGE3Q86Y29 109 aa12.98□□□□□ -0.33
SNCB-202ENST00000393693 ORMDL3Q8N138 153 aa12.98□□□□□ -0.33
SNCB-202ENST00000393693 MAPKAPK5-AS1Q8N8E1 139 aa12.98□□□□□ -0.33
SNCB-202ENST00000393693 TMEM263Q8WUH6 116 aaKnown RBP12.98□□□□□ -0.33
SNCB-202ENST00000393693 C16orf74Q96GX8 76 aa12.98□□□□□ -0.33
SNCB-202ENST00000393693 APOBP04114 4563 aaKnown RBP12.98□□□□□ -0.33
SNCB-202ENST00000393693 CDK2AP2O75956 126 aa12.97□□□□□ -0.33
SNCB-202ENST00000393693 ZNF876PQ49A33 203 aa12.97□□□□□ -0.33
SNCB-202ENST00000393693 GSN-AS1Q9NRJ2 163 aa12.97□□□□□ -0.33
SNCB-202ENST00000393693 LINC00588Q9Y4M8 146 aa12.97□□□□□ -0.33
SNCB-202ENST00000393693 C14orf178Q8N769 122 aaPredicted RBP12.96□□□□□ -0.33
SNCB-202ENST00000393693 C11orf72Q8NBR9 251 aa12.96□□□□□ -0.33
SNCB-202ENST00000393693 MRAP2Q96G30 205 aa12.96□□□□□ -0.33
SNCB-202ENST00000393693 RNF185Q96GF1 192 aa12.96□□□□□ -0.33
SNCB-202ENST00000393693 LAMTOR2Q9Y2Q5 125 aa12.96□□□□□ -0.33
SNCB-202ENST00000393693 D6R8Y8 96 aa12.95□□□□□ -0.34
SNCB-202ENST00000393693 ATP5G1P05496 136 aa12.95□□□□□ -0.34
SNCB-202ENST00000393693 HOXA5P20719 270 aa12.95□□□□□ -0.34
SNCB-202ENST00000393693 C18orf32Q8TCD1 76 aa12.95□□□□□ -0.34
SNCB-202ENST00000393693 PRELID3AQ96N28 172 aa12.95□□□□□ -0.34
SNCB-202ENST00000393693 A8MWV9 139 aa12.94□□□□□ -0.34
SNCB-202ENST00000393693 MGPP08493 103 aa12.94□□□□□ -0.34
SNCB-202ENST00000393693 CCL18P55774 89 aa12.94□□□□□ -0.34
SNCB-202ENST00000393693 RNASE8Q8TDE3 154 aaKnown RBP12.94□□□□□ -0.34
SNCB-202ENST00000393693 PPP1R17O96001 155 aa12.93□□□□□ -0.34
SNCB-202ENST00000393693 S100A2P29034 98 aa12.93□□□□□ -0.34
SNCB-202ENST00000393693 LOC105371267A0A1B0GV96 52 aa12.91□□□□□ -0.34
SNCB-202ENST00000393693 DAZ2Q13117 558 aaKnown RBP12.91□□□□□ -0.34
SNCB-202ENST00000393693 KIF25-AS1Q9Y6Z4 181 aa12.91□□□□□ -0.34
SNCB-202ENST00000393693 F5H697 171 aa12.9□□□□□ -0.34
SNCB-202ENST00000393693 RHODO00212 210 aa12.9□□□□□ -0.34
SNCB-202ENST00000393693 SPATA12Q7Z6I5 190 aa12.9□□□□□ -0.34
SNCB-202ENST00000393693 RASL10AQ92737 203 aa12.9□□□□□ -0.34
SNCB-202ENST00000393693 KRTAP1-5Q9BYS1 174 aa12.9□□□□□ -0.34
SNCB-202ENST00000393693 MAP1LC3AQ9H492 121 aa12.9□□□□□ -0.34
SNCB-202ENST00000393693 Q9H8V8 135 aa12.9□□□□□ -0.34
SNCB-202ENST00000393693 NOP10Q9NPE3 64 aaKnown RBP12.9□□□□□ -0.34
SNCB-202ENST00000393693 A0A087WWL8 130 aa12.89□□□□□ -0.35
SNCB-202ENST00000393693 SMKR1H3BMG3 65 aa12.89□□□□□ -0.35
SNCB-202ENST00000393693 SERF1AO75920 110 aa12.89□□□□□ -0.35
SNCB-202ENST00000393693 NCR2O95944 276 aa12.89□□□□□ -0.35
SNCB-202ENST00000393693 IQCJQ1A5X6 159 aa12.89□□□□□ -0.35
SNCB-202ENST00000393693 FAM74A4Q5TZK3 123 aa12.89□□□□□ -0.35
SNCB-202ENST00000393693 HIST3H2BBQ8N257 126 aa12.89□□□□□ -0.35
SNCB-202ENST00000393693 PRSS3P2Q8NHM4 247 aa12.89□□□□□ -0.35
SNCB-202ENST00000393693 JPT2Q9H910 190 aa12.89□□□□□ -0.35
SNCB-202ENST00000393693 MRPL16Q9NX20 251 aaKnown RBP12.89□□□□□ -0.35
SNCB-202ENST00000393693 TRGV1A0A0A0MS02 117 aa12.88□□□□□ -0.35
SNCB-202ENST00000393693 TNFRSF6BO95407 300 aa12.88□□□□□ -0.35
SNCB-202ENST00000393693 CRYGDP07320 174 aa12.88□□□□□ -0.35
SNCB-202ENST00000393693 ESDP10768 282 aa12.88□□□□□ -0.35
SNCB-202ENST00000393693 ZNF56Q15929 161 aa12.88□□□□□ -0.35
SNCB-202ENST00000393693 NIT1Q86X76 327 aa12.88□□□□□ -0.35
SNCB-202ENST00000393693 Q8N1X5 172 aa12.88□□□□□ -0.35
SNCB-202ENST00000393693 TMEM18Q96B42 140 aa12.88□□□□□ -0.35
SNCB-202ENST00000393693 CHCHD1Q96BP2 118 aaKnown RBP12.88□□□□□ -0.35
SNCB-202ENST00000393693 H7C1H1 209 aa12.87□□□□□ -0.35
SNCB-202ENST00000393693 RS1O15537 224 aa12.87□□□□□ -0.35
SNCB-202ENST00000393693 NPYP01303 97 aa12.87□□□□□ -0.35
SNCB-202ENST00000393693 LINC00315P59091 139 aa12.87□□□□□ -0.35
SNCB-202ENST00000393693 RNASEKQ6P5S7 137 aaKnown RBP12.87□□□□□ -0.35
SNCB-202ENST00000393693 FA2HQ7L5A8 372 aa12.87□□□□□ -0.35
SNCB-202ENST00000393693 TRAV26-1A0A087WT03 109 aa12.86□□□□□ -0.35
SNCB-202ENST00000393693 A0A0J9YY99 117 aa12.86□□□□□ -0.35
SNCB-202ENST00000393693 CIDEAO60543 219 aa12.86□□□□□ -0.35
SNCB-202ENST00000393693 HSBP1O75506 76 aa12.86□□□□□ -0.35
SNCB-202ENST00000393693 LINC00614P0C842 121 aa12.86□□□□□ -0.35
SNCB-202ENST00000393693 KRTAP10-2P60368 255 aa12.86□□□□□ -0.35
SNCB-202ENST00000393693 PDZD11Q5EBL8 140 aa12.86□□□□□ -0.35
SNCB-202ENST00000393693 TRAV26-2A0A0B4J265 109 aa12.85□□□□□ -0.35
SNCB-202ENST00000393693 PMCHP20382 165 aa12.85□□□□□ -0.35
SNCB-202ENST00000393693 CFAP126Q5VTH2 177 aa12.85□□□□□ -0.35
SNCB-202ENST00000393693 ZFP2Q6ZN57 461 aa12.85□□□□□ -0.35
SNCB-202ENST00000393693 OR4C5Q8NGB2 326 aa12.85□□□□□ -0.35
SNCB-202ENST00000393693 C20orf78Q9BR46 151 aa12.85□□□□□ -0.35
SNCB-202ENST00000393693 SAMD10Q9BYL1 202 aa12.85□□□□□ -0.35
SNCB-202ENST00000393693 NXT2Q9NPJ8 142 aaKnown RBP12.85□□□□□ -0.35
SNCB-202ENST00000393693 LOC389332A0A1B0GUA5 103 aa12.84□□□□□ -0.35
SNCB-202ENST00000393693 PRSS47A8MTI9 375 aa12.84□□□□□ -0.35
SNCB-202ENST00000393693 ESRGQ1W209 222 aa12.84□□□□□ -0.35
SNCB-202ENST00000393693 SUMO4Q6EEV6 95 aa12.84□□□□□ -0.35
SNCB-202ENST00000393693 NRACQ8N912 160 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms