RNA–Protein interactions for RNA: ENST00000393551.5

PDLIM7-205, Transcript of PDZ and LIM domain 7, humanhuman

TSL 1 (best) BASIC

Gene PDLIM7, Length 1,226 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-205ENST00000393551 SULT1A2P50226 295 aa11.93□□□□□ -0.5
PDLIM7-205ENST00000393551 ZNF56Q15929 161 aa11.93□□□□□ -0.5
PDLIM7-205ENST00000393551 ENHOQ6UWT2 76 aa11.93□□□□□ -0.5
PDLIM7-205ENST00000393551 ALKAL2Q6UX46 152 aa11.93□□□□□ -0.5
PDLIM7-205ENST00000393551 RMI2Q96E14 147 aa11.93□□□□□ -0.5
PDLIM7-205ENST00000393551 RPL35P42766 123 aaKnown RBP11.92□□□□□ -0.5
PDLIM7-205ENST00000393551 BLOC1S1P78537 153 aa11.92□□□□□ -0.5
PDLIM7-205ENST00000393551 NDUFA5Q16718 116 aa11.92□□□□□ -0.5
PDLIM7-205ENST00000393551 MPV17L2Q567V2 206 aa11.92□□□□□ -0.5
PDLIM7-205ENST00000393551 CLLU1Q5K131 121 aa11.92□□□□□ -0.5
PDLIM7-205ENST00000393551 NTM-AS1Q6ZSK4 140 aa11.92□□□□□ -0.5
PDLIM7-205ENST00000393551 Q8N976 141 aa11.92□□□□□ -0.5
PDLIM7-205ENST00000393551 IGLV2-8P01709 118 aa11.91□□□□□ -0.5
PDLIM7-205ENST00000393551 SSTP61278 116 aa11.91□□□□□ -0.5
PDLIM7-205ENST00000393551 SCXQ7RTU7 201 aa11.91□□□□□ -0.5
PDLIM7-205ENST00000393551 LINC00528Q8N1L1 170 aa11.91□□□□□ -0.5
PDLIM7-205ENST00000393551 RBFOX3A6NFN3 312 aa11.9□□□□□ -0.5
PDLIM7-205ENST00000393551 TMEM262E9PQX1 116 aa11.9□□□□□ -0.5
PDLIM7-205ENST00000393551 ELOBQ15370 118 aa11.9□□□□□ -0.5
PDLIM7-205ENST00000393551 SPANXN1Q5VSR9 72 aa11.9□□□□□ -0.5
PDLIM7-205ENST00000393551 C11orf52Q96A22 123 aa11.9□□□□□ -0.5
PDLIM7-205ENST00000393551 GZMBP10144 247 aa11.89□□□□□ -0.51
PDLIM7-205ENST00000393551 Q0VG73 95 aa11.89□□□□□ -0.51
PDLIM7-205ENST00000393551 C15orf54Q8N8G6 183 aa11.89□□□□□ -0.51
PDLIM7-205ENST00000393551 VAX2Q9UIW0 290 aa11.89□□□□□ -0.51
PDLIM7-205ENST00000393551 PKHD1L1Q86WI1 4243 aa11.89□□□□□ -0.51
PDLIM7-205ENST00000393551 FAT3Q8TDW7 4589 aa11.89□□□□□ -0.51
PDLIM7-205ENST00000393551 TRAV1-1A0A0B4J248 108 aa11.88□□□□□ -0.51
PDLIM7-205ENST00000393551 F5H697 171 aa11.88□□□□□ -0.51
PDLIM7-205ENST00000393551 GNG13Q9P2W3 67 aa11.88□□□□□ -0.51
PDLIM7-205ENST00000393551 IGLC6P0CF74 106 aa11.87□□□□□ -0.51
PDLIM7-205ENST00000393551 KRTAP10-4P60372 401 aaPredicted RBP11.87□□□□□ -0.51
PDLIM7-205ENST00000393551 KCNIP4Q6PIL6 250 aa11.87□□□□□ -0.51
PDLIM7-205ENST00000393551 MANBALQ9NQG1 85 aa11.87□□□□□ -0.51
PDLIM7-205ENST00000393551 MED9Q9NWA0 146 aa11.87□□□□□ -0.51
PDLIM7-205ENST00000393551 RAB19A4D1S5 217 aa11.86□□□□□ -0.51
PDLIM7-205ENST00000393551 TEX46H3BTG2 121 aa11.86□□□□□ -0.51
PDLIM7-205ENST00000393551 CENPWQ5EE01 88 aa11.86□□□□□ -0.51
PDLIM7-205ENST00000393551 CHCHD5Q9BSY4 110 aa11.86□□□□□ -0.51
PDLIM7-205ENST00000393551 CHAC1Q9BUX1 264 aa11.86□□□□□ -0.51
PDLIM7-205ENST00000393551 C1orf43Q9BWL3 253 aa11.86□□□□□ -0.51
PDLIM7-205ENST00000393551 C19orf71A6NCJ1 209 aa11.85□□□□□ -0.51
PDLIM7-205ENST00000393551 ANGP03950 147 aaKnown RBP11.85□□□□□ -0.51
PDLIM7-205ENST00000393551 PLA2G1BP04054 148 aaKnown RBP11.85□□□□□ -0.51
PDLIM7-205ENST00000393551 KRTAP26-1Q6PEX3 210 aa11.85□□□□□ -0.51
PDLIM7-205ENST00000393551 CIRBP-AS1Q8TBR5 109 aa11.85□□□□□ -0.51
PDLIM7-205ENST00000393551 TRBV20OR9-2A0A075B6H5 130 aa11.84□□□□□ -0.51
PDLIM7-205ENST00000393551 LINC00862A6NCI5 91 aa11.84□□□□□ -0.51
PDLIM7-205ENST00000393551 M0QY20 66 aa11.84□□□□□ -0.51
PDLIM7-205ENST00000393551 LYPD6BQ8NI32 183 aa11.84□□□□□ -0.51
PDLIM7-205ENST00000393551 AP1S3Q96PC3 154 aa11.84□□□□□ -0.51
PDLIM7-205ENST00000393551 PRR34Q9NV39 138 aa11.84□□□□□ -0.51
PDLIM7-205ENST00000393551 CRPP02741 224 aa11.83□□□□□ -0.52
PDLIM7-205ENST00000393551 RBX1P62877 108 aa11.83□□□□□ -0.52
PDLIM7-205ENST00000393551 OR2D3Q8NGH3 330 aa11.83□□□□□ -0.52
PDLIM7-205ENST00000393551 USP17L23D6RBM5 183 aa11.82□□□□□ -0.52
PDLIM7-205ENST00000393551 SMIM17P0DL12 118 aa11.82□□□□□ -0.52
PDLIM7-205ENST00000393551 GAGE6Q13070 117 aa11.82□□□□□ -0.52
PDLIM7-205ENST00000393551 MIAQ16674 131 aa11.82□□□□□ -0.52
PDLIM7-205ENST00000393551 SUMO4Q6EEV6 95 aa11.82□□□□□ -0.52
PDLIM7-205ENST00000393551 FER1L6-AS1Q8NA97 138 aa11.82□□□□□ -0.52
PDLIM7-205ENST00000393551 TPPP3Q9BW30 176 aa11.82□□□□□ -0.52
PDLIM7-205ENST00000393551 HLA-DQA1P01909 254 aa11.81□□□□□ -0.52
PDLIM7-205ENST00000393551 PRSS1P07477 247 aa11.81□□□□□ -0.52
PDLIM7-205ENST00000393551 IQCJQ1A5X6 159 aa11.81□□□□□ -0.52
PDLIM7-205ENST00000393551 CLPSL2Q6UWE3 100 aa11.81□□□□□ -0.52
PDLIM7-205ENST00000393551 TRBV25-1A0A075B6N4 114 aa11.8□□□□□ -0.52
PDLIM7-205ENST00000393551 MGPP08493 103 aa11.8□□□□□ -0.52
PDLIM7-205ENST00000393551 MEF2BQ02080 365 aaPredicted RBP11.8□□□□□ -0.52
PDLIM7-205ENST00000393551 C14orf177Q52M58 125 aa11.8□□□□□ -0.52
PDLIM7-205ENST00000393551 TMEM97Q5BJF2 176 aa11.8□□□□□ -0.52
PDLIM7-205ENST00000393551 LINC00269Q8N2A0 174 aa11.8□□□□□ -0.52
PDLIM7-205ENST00000393551 SREK1IP1Q8N9Q2 155 aaPredicted RBP11.8□□□□□ -0.52
PDLIM7-205ENST00000393551 DEFB104AQ8WTQ1 72 aa11.8□□□□□ -0.52
PDLIM7-205ENST00000393551 KRTAP29-1A8MX34 341 aaPredicted RBP11.79□□□□□ -0.52
PDLIM7-205ENST00000393551 J3QL48 77 aa11.79□□□□□ -0.52
PDLIM7-205ENST00000393551 GNG4P50150 75 aa11.79□□□□□ -0.52
PDLIM7-205ENST00000393551 RPS20P60866 119 aaKnown RBP11.79□□□□□ -0.52
PDLIM7-205ENST00000393551 PKIAP61925 76 aa11.79□□□□□ -0.52
PDLIM7-205ENST00000393551 DAZAP1Q96EP5 407 aaKnown RBP11.79□□□□□ -0.52
PDLIM7-205ENST00000393551 SMIM12Q96EX1 92 aa11.79□□□□□ -0.52
PDLIM7-205ENST00000393551 TAGLN2P37802 199 aaKnown RBP11.78□□□□□ -0.52
PDLIM7-205ENST00000393551 CACNG7P62955 275 aa11.78□□□□□ -0.52
PDLIM7-205ENST00000393551 LYZL1Q6UWQ5 148 aa11.78□□□□□ -0.52
PDLIM7-205ENST00000393551 PDE6DO43924 150 aa11.77□□□□□ -0.53
PDLIM7-205ENST00000393551 P01737 135 aa11.77□□□□□ -0.53
PDLIM7-205ENST00000393551 C20orf203Q8NBC4 194 aa11.77□□□□□ -0.53
PDLIM7-205ENST00000393551 GFRA4Q9GZZ7 299 aa11.77□□□□□ -0.53
PDLIM7-205ENST00000393551 SMDT1Q9H4I9 107 aa11.77□□□□□ -0.53
PDLIM7-205ENST00000393551 IGHV1-24A0A0C4DH33 117 aa11.76□□□□□ -0.53
PDLIM7-205ENST00000393551 F2Z2F3 143 aa11.76□□□□□ -0.53
PDLIM7-205ENST00000393551 BCL2P10415 239 aa11.76□□□□□ -0.53
PDLIM7-205ENST00000393551 NTF3P20783 257 aa11.76□□□□□ -0.53
PDLIM7-205ENST00000393551 UQCC3Q6UW78 93 aa11.76□□□□□ -0.53
PDLIM7-205ENST00000393551 NUDT10Q8NFP7 164 aa11.76□□□□□ -0.53
PDLIM7-205ENST00000393551 NUDT11Q96G61 164 aa11.76□□□□□ -0.53
PDLIM7-205ENST00000393551 IGLV4-60A0A075B6I1 120 aa11.75□□□□□ -0.53
PDLIM7-205ENST00000393551 H7C1H1 209 aa11.75□□□□□ -0.53
PDLIM7-205ENST00000393551 PANO1I0J062 215 aa11.75□□□□□ -0.53
PDLIM7-205ENST00000393551 NDUFS6O75380 124 aaKnown RBP11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 191.9 ms