RNA–Protein interactions for RNA: ENST00000392745.6

TRAF3-203, Transcript of TNF receptor associated factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAF3, Length 2,459 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-203ENST00000392745 SOCS3O14543 225 aa13.68□□□□□ -0.22
TRAF3-203ENST00000392745 GNRH2O43555 120 aa13.68□□□□□ -0.22
TRAF3-203ENST00000392745 ASIPP42127 132 aa13.68□□□□□ -0.22
TRAF3-203ENST00000392745 ATP6V0E2Q8NHE4 81 aa13.68□□□□□ -0.22
TRAF3-203ENST00000392745 HECTD1Q9ULT8 2610 aa13.68□□□□□ -0.22
TRAF3-203ENST00000392745 TRAV21A0A0B4J279 112 aa13.68□□□□□ -0.22
TRAF3-203ENST00000392745 K7EMT4 169 aa13.68□□□□□ -0.22
TRAF3-203ENST00000392745 TSHBP01222 138 aa13.68□□□□□ -0.22
TRAF3-203ENST00000392745 UBE2D3P61077 147 aa13.68□□□□□ -0.22
TRAF3-203ENST00000392745 UBE2D2P62837 147 aa13.68□□□□□ -0.22
TRAF3-203ENST00000392745 RPL11P62913 178 aaKnown RBP13.68□□□□□ -0.22
TRAF3-203ENST00000392745 ANK3Q12955 4377 aaKnown RBP13.67□□□□□ -0.22
TRAF3-203ENST00000392745 IGKV3-7A0A075B6H7 116 aa13.67□□□□□ -0.22
TRAF3-203ENST00000392745 LENEPQ9Y5L5 61 aa13.67□□□□□ -0.22
TRAF3-203ENST00000392745 IGLV4-69A0A075B6H9 119 aa13.67□□□□□ -0.22
TRAF3-203ENST00000392745 RNF152Q8N8N0 203 aa13.67□□□□□ -0.22
TRAF3-203ENST00000392745 MT-ATP8P03928 68 aa13.66□□□□□ -0.22
TRAF3-203ENST00000392745 RNASE4P34096 147 aaKnown RBP13.66□□□□□ -0.22
TRAF3-203ENST00000392745 UBE2E2Q96LR5 201 aa13.66□□□□□ -0.22
TRAF3-203ENST00000392745 LINC00477Q96M19 166 aa13.66□□□□□ -0.22
TRAF3-203ENST00000392745 MUC4Q99102 2169 aa13.66□□□□□ -0.22
TRAF3-203ENST00000392745 A0A0J9YY99 117 aa13.66□□□□□ -0.22
TRAF3-203ENST00000392745 SRD5A1P18405 259 aa13.66□□□□□ -0.22
TRAF3-203ENST00000392745 NDUFA11Q86Y39 141 aa13.66□□□□□ -0.22
TRAF3-203ENST00000392745 TEX29Q8N6K0 151 aa13.66□□□□□ -0.22
TRAF3-203ENST00000392745 CARD19Q96LW7 228 aa13.66□□□□□ -0.22
TRAF3-203ENST00000392745 YAE1D1Q9NRH1 226 aa13.66□□□□□ -0.22
TRAF3-203ENST00000392745 IGHV4OR15-8A0A075B7B6 117 aa13.65□□□□□ -0.22
TRAF3-203ENST00000392745 A0A087WW49 117 aa13.65□□□□□ -0.22
TRAF3-203ENST00000392745 F6UB75 175 aa13.65□□□□□ -0.22
TRAF3-203ENST00000392745 SPINK8P0C7L1 97 aa13.65□□□□□ -0.22
TRAF3-203ENST00000392745 RNASE3P12724 160 aaKnown RBP13.65□□□□□ -0.22
TRAF3-203ENST00000392745 DNAJC9-AS1A6NH13 148 aa13.65□□□□□ -0.22
TRAF3-203ENST00000392745 TCL1BO95988 128 aa13.65□□□□□ -0.22
TRAF3-203ENST00000392745 C18orf65Q6ZTR6 163 aa13.65□□□□□ -0.22
TRAF3-203ENST00000392745 TMEM86BQ8N661 226 aa13.65□□□□□ -0.22
TRAF3-203ENST00000392745 OR10J6PQ8NGY7 276 aa13.65□□□□□ -0.22
TRAF3-203ENST00000392745 ESM1Q9NQ30 184 aa13.65□□□□□ -0.22
TRAF3-203ENST00000392745 TP53TG1Q9Y2A0 90 aa13.65□□□□□ -0.22
TRAF3-203ENST00000392745 XGP55808 180 aa13.64□□□□□ -0.23
TRAF3-203ENST00000392745 TSPEAR-AS2P59090 65 aa13.64□□□□□ -0.23
TRAF3-203ENST00000392745 TRAV26-1A0A087WT03 109 aa13.64□□□□□ -0.23
TRAF3-203ENST00000392745 GEMIN7Q9H840 131 aaKnown RBP13.64□□□□□ -0.23
TRAF3-203ENST00000392745 CRYBA4P53673 196 aa13.63□□□□□ -0.23
TRAF3-203ENST00000392745 SYNJ2BPP57105 145 aa13.63□□□□□ -0.23
TRAF3-203ENST00000392745 RPL39P62891 51 aaKnown RBP13.63□□□□□ -0.23
TRAF3-203ENST00000392745 Q6ZSV7 163 aa13.63□□□□□ -0.23
TRAF3-203ENST00000392745 Q6ZUT4 128 aa13.63□□□□□ -0.23
TRAF3-203ENST00000392745 CFC1BP0CG36 223 aa13.62□□□□□ -0.23
TRAF3-203ENST00000392745 CFC1P0CG37 223 aa13.62□□□□□ -0.23
TRAF3-203ENST00000392745 JPT2Q9H910 190 aa13.62□□□□□ -0.23
TRAF3-203ENST00000392745 IGIPA6NJ69 53 aa13.62□□□□□ -0.23
TRAF3-203ENST00000392745 HIST2H2BDQ6DRA6 164 aa13.62□□□□□ -0.23
TRAF3-203ENST00000392745 IGHV3-30P01768 117 aa13.61□□□□□ -0.23
TRAF3-203ENST00000392745 IGHV3-30-5P0DP03 117 aa13.61□□□□□ -0.23
TRAF3-203ENST00000392745 HOXD3P31249 432 aaPredicted RBP13.61□□□□□ -0.23
TRAF3-203ENST00000392745 LINC00315P59091 139 aa13.61□□□□□ -0.23
TRAF3-203ENST00000392745 DEFB136Q30KP8 78 aa13.61□□□□□ -0.23
TRAF3-203ENST00000392745 TEN1Q86WV5 123 aa13.61□□□□□ -0.23
TRAF3-203ENST00000392745 PPDPFLQ8WWR9 84 aa13.61□□□□□ -0.23
TRAF3-203ENST00000392745 MTORP42345 2549 aa13.61□□□□□ -0.23
TRAF3-203ENST00000392745 OVOL1O14753 267 aa13.61□□□□□ -0.23
TRAF3-203ENST00000392745 KIF25-AS1Q9Y6Z4 181 aa13.61□□□□□ -0.23
TRAF3-203ENST00000392745 HERVK_113P61574 105 aa13.6□□□□□ -0.23
TRAF3-203ENST00000392745 PMVKQ15126 192 aa13.6□□□□□ -0.23
TRAF3-203ENST00000392745 TMEM170BQ5T4T1 132 aa13.59□□□□□ -0.23
TRAF3-203ENST00000392745 ZNRF2Q8NHG8 242 aa13.59□□□□□ -0.23
TRAF3-203ENST00000392745 DCANP1Q8TF63 244 aa13.59□□□□□ -0.23
TRAF3-203ENST00000392745 FAM19A4Q96LR4 140 aa13.59□□□□□ -0.23
TRAF3-203ENST00000392745 MED14OSP0DP75 135 aa13.59□□□□□ -0.23
TRAF3-203ENST00000392745 LGALS9O00182 355 aa13.58□□□□□ -0.23
TRAF3-203ENST00000392745 PPP1R17O96001 155 aa13.58□□□□□ -0.23
TRAF3-203ENST00000392745 POM121L12Q8N7R1 296 aa13.58□□□□□ -0.23
TRAF3-203ENST00000392745 SMR3AQ99954 134 aa13.58□□□□□ -0.23
TRAF3-203ENST00000392745 POLR2KP53803 58 aaKnown RBP13.58□□□□□ -0.24
TRAF3-203ENST00000392745 LYRM7Q5U5X0 104 aa13.58□□□□□ -0.24
TRAF3-203ENST00000392745 SLC25A29Q8N8R3 303 aa13.58□□□□□ -0.24
TRAF3-203ENST00000392745 KIR2DL4Q99706 377 aa13.58□□□□□ -0.24
TRAF3-203ENST00000392745 SORL1Q92673 2214 aa13.58□□□□□ -0.24
TRAF3-203ENST00000392745 A0A087WWL8 130 aa13.57□□□□□ -0.24
TRAF3-203ENST00000392745 C10orf126Q8N4M7 172 aa13.57□□□□□ -0.24
TRAF3-203ENST00000392745 SLURP1P55000 103 aa13.57□□□□□ -0.24
TRAF3-203ENST00000392745 PAPPA-AS1Q5QFB9 102 aa13.57□□□□□ -0.24
TRAF3-203ENST00000392745 SUMO4Q6EEV6 95 aa13.57□□□□□ -0.24
TRAF3-203ENST00000392745 AMELXQ99217 191 aa13.57□□□□□ -0.24
TRAF3-203ENST00000392745 NOTCH2Q04721 2471 aa13.57□□□□□ -0.24
TRAF3-203ENST00000392745 A8MWV9 139 aa13.56□□□□□ -0.24
TRAF3-203ENST00000392745 SBSPONQ8IVN8 264 aa13.56□□□□□ -0.24
TRAF3-203ENST00000392745 ANKRD29Q8N6D5 301 aa13.56□□□□□ -0.24
TRAF3-203ENST00000392745 DUX3Q96PT4 197 aa13.56□□□□□ -0.24
TRAF3-203ENST00000392745 TRBV20-1A0A075B6N2 111 aa13.56□□□□□ -0.24
TRAF3-203ENST00000392745 NXPH4O95158 308 aa13.56□□□□□ -0.24
TRAF3-203ENST00000392745 SCGB1C2P0DMR2 95 aa13.56□□□□□ -0.24
TRAF3-203ENST00000392745 APRG1Q8IVJ8 170 aa13.56□□□□□ -0.24
TRAF3-203ENST00000392745 SDHAF1A6NFY7 115 aa13.54□□□□□ -0.24
TRAF3-203ENST00000392745 F5H697 171 aa13.54□□□□□ -0.24
TRAF3-203ENST00000392745 KHDC1LQ5JSQ8 128 aa13.54□□□□□ -0.24
TRAF3-203ENST00000392745 RAX2Q96IS3 184 aa13.54□□□□□ -0.24
TRAF3-203ENST00000392745 PRO1854Q9UHT4 67 aa13.54□□□□□ -0.24
TRAF3-203ENST00000392745 J3QQQ9 107 aa13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms