RNA–Protein interactions for RNA: ENST00000392399.3

UBBP1-201, Transcript of ubiquitin B pseudogene 1, humanhuman

BASIC

Gene UBBP1, Length 473 nt, Biotype processed pseudogene.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBBP1-201ENST00000392399 URGCP-MRPS24S4R325 110 aa4.7□□□□□ -1.66
UBBP1-201ENST00000392399 RYR3Q15413 4870 aa4.7□□□□□ -1.66
UBBP1-201ENST00000392399 A0A087WWL8 130 aa4.69□□□□□ -1.66
UBBP1-201ENST00000392399 IGHV3-73A0A0B4J1V6 119 aa4.69□□□□□ -1.66
UBBP1-201ENST00000392399 A0A1B0GW15 77 aa4.69□□□□□ -1.66
UBBP1-201ENST00000392399 GYPEP15421 78 aa4.69□□□□□ -1.66
UBBP1-201ENST00000392399 RPS10P46783 165 aaKnown RBP4.69□□□□□ -1.66
UBBP1-201ENST00000392399 TIRAPP58753 221 aa4.69□□□□□ -1.66
UBBP1-201ENST00000392399 FAM74A4Q5TZK3 123 aa4.69□□□□□ -1.66
UBBP1-201ENST00000392399 SMIM15Q7Z3B0 74 aa4.69□□□□□ -1.66
UBBP1-201ENST00000392399 UBE2DNLQ8IWF7 75 aa4.69□□□□□ -1.66
UBBP1-201ENST00000392399 GTSF1Q8WW33 167 aa4.69□□□□□ -1.66
UBBP1-201ENST00000392399 GNB1LQ9BYB4 327 aa4.69□□□□□ -1.66
UBBP1-201ENST00000392399 KIF25-AS1Q9Y6Z4 181 aa4.69□□□□□ -1.66
UBBP1-201ENST00000392399 NACAE9PAV3 2078 aa4.69□□□□□ -1.66
UBBP1-201ENST00000392399 RYR2Q92736 4967 aa4.69□□□□□ -1.66
UBBP1-201ENST00000392399 MUC21A0A0G2JKD1 596 aa4.68□□□□□ -1.66
UBBP1-201ENST00000392399 MUC21A0A140T8X8 626 aa4.68□□□□□ -1.66
UBBP1-201ENST00000392399 A0A1B0GUT8 65 aa4.68□□□□□ -1.66
UBBP1-201ENST00000392399 HIGD1CA8MV81 97 aa4.68□□□□□ -1.66
UBBP1-201ENST00000392399 H7C1H1 209 aa4.68□□□□□ -1.66
UBBP1-201ENST00000392399 PHOX2AO14813 284 aa4.68□□□□□ -1.66
UBBP1-201ENST00000392399 HLA-DQA1P01909 254 aa4.68□□□□□ -1.66
UBBP1-201ENST00000392399 S100A8P05109 93 aa4.68□□□□□ -1.66
UBBP1-201ENST00000392399 SSTP61278 116 aa4.68□□□□□ -1.66
UBBP1-201ENST00000392399 TWIST1Q15672 202 aa4.68□□□□□ -1.66
UBBP1-201ENST00000392399 ESRGQ1W209 222 aa4.68□□□□□ -1.66
UBBP1-201ENST00000392399 LYPD5Q6UWN5 251 aa4.68□□□□□ -1.66
UBBP1-201ENST00000392399 C14orf178Q8N769 122 aaPredicted RBP4.68□□□□□ -1.66
UBBP1-201ENST00000392399 GATD1Q8NB37 220 aa4.68□□□□□ -1.66
UBBP1-201ENST00000392399 FRZBQ92765 325 aa4.68□□□□□ -1.66
UBBP1-201ENST00000392399 UPK3BQ9BT76 320 aa4.68□□□□□ -1.66
UBBP1-201ENST00000392399 DPH3P1Q9H4G8 78 aa4.68□□□□□ -1.66
UBBP1-201ENST00000392399 MSRB1Q9NZV6 116 aa4.68□□□□□ -1.66
UBBP1-201ENST00000392399 LINC00588Q9Y4M8 146 aa4.68□□□□□ -1.66
UBBP1-201ENST00000392399 KMT2AQ03164 3969 aa4.68□□□□□ -1.66
UBBP1-201ENST00000392399 DNAH2Q9P225 4427 aa4.68□□□□□ -1.66
UBBP1-201ENST00000392399 HYDINQ4G0P3 5121 aa4.67□□□□□ -1.66
UBBP1-201ENST00000392399 TRBV7-3A0A075B6L6 115 aa4.67□□□□□ -1.66
UBBP1-201ENST00000392399 A0A1B0GXF2 115 aa4.67□□□□□ -1.66
UBBP1-201ENST00000392399 F5H697 171 aa4.67□□□□□ -1.66
UBBP1-201ENST00000392399 EVI2AP22794 236 aa4.67□□□□□ -1.66
UBBP1-201ENST00000392399 LINC00315P59091 139 aa4.67□□□□□ -1.66
UBBP1-201ENST00000392399 RPL36AP83881 106 aaKnown RBP4.67□□□□□ -1.66
UBBP1-201ENST00000392399 RIGQ13278 110 aa4.67□□□□□ -1.66
UBBP1-201ENST00000392399 ZNF56Q15929 161 aa4.67□□□□□ -1.66
UBBP1-201ENST00000392399 Q6ZSN1 163 aa4.67□□□□□ -1.66
UBBP1-201ENST00000392399 NUP35Q8NFH5 326 aa4.67□□□□□ -1.66
UBBP1-201ENST00000392399 ATP6V0E2Q8NHE4 81 aa4.67□□□□□ -1.66
UBBP1-201ENST00000392399 RPL36ALQ969Q0 106 aaKnown RBP4.67□□□□□ -1.66
UBBP1-201ENST00000392399 PGLYRP4Q96LB8 373 aa4.67□□□□□ -1.66
UBBP1-201ENST00000392399 DNAJC30Q96LL9 226 aa4.67□□□□□ -1.66
UBBP1-201ENST00000392399 Q9H8V8 135 aa4.67□□□□□ -1.66
UBBP1-201ENST00000392399 TMA7Q9Y2S6 64 aaKnown RBP4.67□□□□□ -1.66
UBBP1-201ENST00000392399 MRPS16Q9Y3D3 137 aaKnown RBP4.67□□□□□ -1.66
UBBP1-201ENST00000392399 DNAH6Q9C0G6 4158 aa4.67□□□□□ -1.66
UBBP1-201ENST00000392399 LOC100131303A0A0U1RQF7 123 aa4.66□□□□□ -1.66
UBBP1-201ENST00000392399 K7EP13 123 aa4.66□□□□□ -1.66
UBBP1-201ENST00000392399 HBBP68871 147 aa4.66□□□□□ -1.66
UBBP1-201ENST00000392399 COA6Q5JTJ3 125 aaKnown RBP4.66□□□□□ -1.66
UBBP1-201ENST00000392399 LCE3BQ5TA77 95 aa4.66□□□□□ -1.66
UBBP1-201ENST00000392399 ZNRF2Q8NHG8 242 aa4.66□□□□□ -1.66
UBBP1-201ENST00000392399 TMEM191AQ9H0A3 160 aa4.66□□□□□ -1.66
UBBP1-201ENST00000392399 GTSF1LQ9H1H1 148 aa4.66□□□□□ -1.66
UBBP1-201ENST00000392399 DNAH10Q8IVF4 4471 aa4.66□□□□□ -1.66
UBBP1-201ENST00000392399 TRAV9-2A0A087WT02 112 aa4.65□□□□□ -1.67
UBBP1-201ENST00000392399 TRAV8-6A0A0B4J262 113 aa4.65□□□□□ -1.67
UBBP1-201ENST00000392399 GAGE12JA6NER3 117 aa4.65□□□□□ -1.67
UBBP1-201ENST00000392399 M0QY20 66 aa4.65□□□□□ -1.67
UBBP1-201ENST00000392399 SIVA1O15304 175 aa4.65□□□□□ -1.67
UBBP1-201ENST00000392399 TRGC2P03986 189 aa4.65□□□□□ -1.67
UBBP1-201ENST00000392399 MGPP08493 103 aa4.65□□□□□ -1.67
UBBP1-201ENST00000392399 LINC00694P0DN24 101 aa4.65□□□□□ -1.67
UBBP1-201ENST00000392399 BTF3P20290 206 aaKnown RBP4.65□□□□□ -1.67
UBBP1-201ENST00000392399 GAGE1Q13065 139 aa4.65□□□□□ -1.67
UBBP1-201ENST00000392399 GAGE4Q13068 117 aa4.65□□□□□ -1.67
UBBP1-201ENST00000392399 GAGE5Q13069 117 aa4.65□□□□□ -1.67
UBBP1-201ENST00000392399 GAGE13Q4V321 117 aa4.65□□□□□ -1.67
UBBP1-201ENST00000392399 TMEM97Q5BJF2 176 aa4.65□□□□□ -1.67
UBBP1-201ENST00000392399 LELP1Q5T871 98 aa4.65□□□□□ -1.67
UBBP1-201ENST00000392399 TMEM136Q6ZRR5 245 aa4.65□□□□□ -1.67
UBBP1-201ENST00000392399 DAZ4Q86SG3 579 aaKnown RBP4.65□□□□□ -1.67
UBBP1-201ENST00000392399 NIT2Q9NQR4 276 aa4.65□□□□□ -1.67
UBBP1-201ENST00000392399 DAZ3Q9NR90 486 aaKnown RBP4.65□□□□□ -1.67
UBBP1-201ENST00000392399 TRAPPC1Q9Y5R8 145 aa4.65□□□□□ -1.67
UBBP1-201ENST00000392399 TNFRSF18Q9Y5U5 241 aa4.65□□□□□ -1.67
UBBP1-201ENST00000392399 NBDYA0A0U1RRE5 68 aa4.64□□□□□ -1.67
UBBP1-201ENST00000392399 HIST1H2BKO60814 126 aa4.64□□□□□ -1.67
UBBP1-201ENST00000392399 S100A6P06703 90 aa4.64□□□□□ -1.67
UBBP1-201ENST00000392399 HIST1H2BJP06899 126 aa4.64□□□□□ -1.67
UBBP1-201ENST00000392399 HIST1H2BOP23527 126 aa4.64□□□□□ -1.67
UBBP1-201ENST00000392399 HIST1H2BBP33778 126 aa4.64□□□□□ -1.67
UBBP1-201ENST00000392399 HIST1H2BDP58876 126 aa4.64□□□□□ -1.67
UBBP1-201ENST00000392399 UBE2D3P61077 147 aa4.64□□□□□ -1.67
UBBP1-201ENST00000392399 HIST1H2BCP62807 126 aa4.64□□□□□ -1.67
UBBP1-201ENST00000392399 UBE2D2P62837 147 aa4.64□□□□□ -1.67
UBBP1-201ENST00000392399 HIST2H2BEQ16778 126 aa4.64□□□□□ -1.67
UBBP1-201ENST00000392399 TTC32Q5I0X7 151 aa4.64□□□□□ -1.67
UBBP1-201ENST00000392399 HIST2H2BFQ5QNW6 126 aaPredicted RBP4.64□□□□□ -1.67
UBBP1-201ENST00000392399 SUMO4Q6EEV6 95 aa4.64□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms