RNA–Protein interactions for RNA: ENST00000392128.6

SMARCAL1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene SMARCAL1, Length 2,431 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-203ENST00000392128 H0Y8G0 127 aa8.3□□□□□ -1.08
SMARCAL1-203ENST00000392128 AZU1P20160 251 aa8.3□□□□□ -1.08
SMARCAL1-203ENST00000392128 LAGE3Q14657 143 aa8.3□□□□□ -1.08
SMARCAL1-203ENST00000392128 ZNF56Q15929 161 aa8.3□□□□□ -1.08
SMARCAL1-203ENST00000392128 PET117Q6UWS5 81 aa8.3□□□□□ -1.08
SMARCAL1-203ENST00000392128 CSNK1G2-AS1Q8NCQ2 148 aa8.3□□□□□ -1.08
SMARCAL1-203ENST00000392128 IGHV3OR16-12A0A075B7B8 117 aa8.29□□□□□ -1.08
SMARCAL1-203ENST00000392128 WIPF1O43516 503 aa8.29□□□□□ -1.08
SMARCAL1-203ENST00000392128 SPATA12Q7Z6I5 190 aa8.29□□□□□ -1.08
SMARCAL1-203ENST00000392128 TMEM263Q8WUH6 116 aaKnown RBP8.29□□□□□ -1.08
SMARCAL1-203ENST00000392128 EDA2RQ9HAV5 297 aa8.29□□□□□ -1.08
SMARCAL1-203ENST00000392128 VWFP04275 2813 aa8.29□□□□□ -1.08
SMARCAL1-203ENST00000392128 TRBV6-5A0A0K0K1A5 114 aa8.29□□□□□ -1.08
SMARCAL1-203ENST00000392128 A0A1B0GV72 72 aa8.29□□□□□ -1.08
SMARCAL1-203ENST00000392128 M0QY20 66 aa8.29□□□□□ -1.08
SMARCAL1-203ENST00000392128 SCGB1A1P11684 91 aa8.29□□□□□ -1.08
SMARCAL1-203ENST00000392128 UFSP1Q6NVU6 142 aa8.29□□□□□ -1.08
SMARCAL1-203ENST00000392128 ST20Q9HBF5 79 aa8.29□□□□□ -1.08
SMARCAL1-203ENST00000392128 NACAE9PAV3 2078 aa8.28□□□□□ -1.08
SMARCAL1-203ENST00000392128 TMEM158Q8WZ71 300 aa8.28□□□□□ -1.08
SMARCAL1-203ENST00000392128 VAMP8Q9BV40 100 aa8.28□□□□□ -1.08
SMARCAL1-203ENST00000392128 POLR2KP53803 58 aaKnown RBP8.28□□□□□ -1.08
SMARCAL1-203ENST00000392128 ORMDL2Q53FV1 153 aa8.28□□□□□ -1.08
SMARCAL1-203ENST00000392128 ZNF705AQ6ZN79 300 aaPredicted RBP8.28□□□□□ -1.08
SMARCAL1-203ENST00000392128 OCIAD2Q56VL3 154 aa8.27□□□□□ -1.09
SMARCAL1-203ENST00000392128 LINC01545Q5VT33 79 aa8.27□□□□□ -1.09
SMARCAL1-203ENST00000392128 CFAP126Q5VTH2 177 aa8.27□□□□□ -1.09
SMARCAL1-203ENST00000392128 RHODO00212 210 aa8.27□□□□□ -1.09
SMARCAL1-203ENST00000392128 SHISA2Q6UWI4 295 aa8.27□□□□□ -1.09
SMARCAL1-203ENST00000392128 IFI27L1Q96BM0 104 aa8.27□□□□□ -1.09
SMARCAL1-203ENST00000392128 C16orf74Q96GX8 76 aa8.27□□□□□ -1.09
SMARCAL1-203ENST00000392128 MRPL16Q9NX20 251 aaKnown RBP8.27□□□□□ -1.09
SMARCAL1-203ENST00000392128 H7C1H1 209 aa8.26□□□□□ -1.09
SMARCAL1-203ENST00000392128 RS1O15537 224 aa8.26□□□□□ -1.09
SMARCAL1-203ENST00000392128 IGLL1P15814 213 aa8.26□□□□□ -1.09
SMARCAL1-203ENST00000392128 PRIMA1Q86XR5 153 aa8.26□□□□□ -1.09
SMARCAL1-203ENST00000392128 TRBV27A0A0K0K1C4 114 aa8.25□□□□□ -1.09
SMARCAL1-203ENST00000392128 VCYO14598 125 aa8.25□□□□□ -1.09
SMARCAL1-203ENST00000392128 NUDT3O95989 172 aa8.25□□□□□ -1.09
SMARCAL1-203ENST00000392128 LGALS9BQ3B8N2 356 aa8.25□□□□□ -1.09
SMARCAL1-203ENST00000392128 PAM16Q9Y3D7 125 aa8.25□□□□□ -1.09
SMARCAL1-203ENST00000392128 SDHAF1A6NFY7 115 aa8.25□□□□□ -1.09
SMARCAL1-203ENST00000392128 DAZ2Q13117 558 aaKnown RBP8.25□□□□□ -1.09
SMARCAL1-203ENST00000392128 ATOH7Q8N100 152 aa8.25□□□□□ -1.09
SMARCAL1-203ENST00000392128 PLAC8L1A1L4L8 177 aa8.24□□□□□ -1.09
SMARCAL1-203ENST00000392128 K7ERU9 68 aa8.24□□□□□ -1.09
SMARCAL1-203ENST00000392128 ZFP2Q6ZN57 461 aa8.24□□□□□ -1.09
SMARCAL1-203ENST00000392128 C3orf56Q8N813 242 aa8.24□□□□□ -1.09
SMARCAL1-203ENST00000392128 NOTCH3Q9UM47 2321 aa8.24□□□□□ -1.09
SMARCAL1-203ENST00000392128 TRAV9-2A0A087WT02 112 aa8.24□□□□□ -1.09
SMARCAL1-203ENST00000392128 ATP5LO75964 103 aa8.24□□□□□ -1.09
SMARCAL1-203ENST00000392128 RRN3P1Q2M238 152 aa8.24□□□□□ -1.09
SMARCAL1-203ENST00000392128 LGALS9CQ6DKI2 356 aa8.24□□□□□ -1.09
SMARCAL1-203ENST00000392128 TOMM6Q96B49 74 aa8.24□□□□□ -1.09
SMARCAL1-203ENST00000392128 C18orf15Q96N68 181 aa8.24□□□□□ -1.09
SMARCAL1-203ENST00000392128 KIR2DL4Q99706 377 aa8.24□□□□□ -1.09
SMARCAL1-203ENST00000392128 PGPEP1Q9NXJ5 209 aa8.24□□□□□ -1.09
SMARCAL1-203ENST00000392128 TRGV1A0A0A0MS02 117 aa8.23□□□□□ -1.09
SMARCAL1-203ENST00000392128 IGHV3-73A0A0B4J1V6 119 aa8.23□□□□□ -1.09
SMARCAL1-203ENST00000392128 SPATA45Q537H7 98 aa8.23□□□□□ -1.09
SMARCAL1-203ENST00000392128 NEGR1Q7Z3B1 354 aa8.23□□□□□ -1.09
SMARCAL1-203ENST00000392128 IGHV3-53P01767 116 aa8.23□□□□□ -1.09
SMARCAL1-203ENST00000392128 CST9LQ9H4G1 147 aa8.23□□□□□ -1.09
SMARCAL1-203ENST00000392128 KIR2DL5BQ8NHK3 375 aa8.22□□□□□ -1.09
SMARCAL1-203ENST00000392128 OVOL2Q9BRP0 275 aa8.22□□□□□ -1.09
SMARCAL1-203ENST00000392128 MIEN1Q9BRT3 115 aa8.22□□□□□ -1.09
SMARCAL1-203ENST00000392128 TRRAPQ9Y4A5 3859 aa8.22□□□□□ -1.09
SMARCAL1-203ENST00000392128 LINC01549A6NIU2 74 aa8.22□□□□□ -1.09
SMARCAL1-203ENST00000392128 C2orf66Q6UXQ4 117 aa8.22□□□□□ -1.09
SMARCAL1-203ENST00000392128 C12orf54Q6X4T0 127 aa8.22□□□□□ -1.09
SMARCAL1-203ENST00000392128 Q6ZTI0 123 aa8.22□□□□□ -1.09
SMARCAL1-203ENST00000392128 OR4C5Q8NGB2 326 aa8.22□□□□□ -1.09
SMARCAL1-203ENST00000392128 NOP10Q9NPE3 64 aaKnown RBP8.22□□□□□ -1.09
SMARCAL1-203ENST00000392128 TRAV4A0A0B4J268 109 aa8.21□□□□□ -1.09
SMARCAL1-203ENST00000392128 Q6ZSN1 163 aa8.21□□□□□ -1.09
SMARCAL1-203ENST00000392128 FBN1P35555 2871 aaKnown RBP8.21□□□□□ -1.1
SMARCAL1-203ENST00000392128 I3L3M4 83 aa8.21□□□□□ -1.1
SMARCAL1-203ENST00000392128 RIPPLY3P57055 190 aa8.21□□□□□ -1.1
SMARCAL1-203ENST00000392128 PMCHL2Q9BQD1 86 aa8.21□□□□□ -1.1
SMARCAL1-203ENST00000392128 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP8.2□□□□□ -1.1
SMARCAL1-203ENST00000392128 P0DMU3 169 aa8.2□□□□□ -1.1
SMARCAL1-203ENST00000392128 FAM231AP0DMU4 169 aa8.2□□□□□ -1.1
SMARCAL1-203ENST00000392128 FAM231CP0DMU5 169 aa8.2□□□□□ -1.1
SMARCAL1-203ENST00000392128 APOC4P55056 127 aa8.2□□□□□ -1.1
SMARCAL1-203ENST00000392128 RHOHQ15669 191 aa8.2□□□□□ -1.1
SMARCAL1-203ENST00000392128 DNAJC30Q96LL9 226 aa8.2□□□□□ -1.1
SMARCAL1-203ENST00000392128 TNFRSF18Q9Y5U5 241 aa8.2□□□□□ -1.1
SMARCAL1-203ENST00000392128 SMIM9A6NGZ8 99 aa8.2□□□□□ -1.1
SMARCAL1-203ENST00000392128 PRSS1P07477 247 aa8.2□□□□□ -1.1
SMARCAL1-203ENST00000392128 SCGB3A1Q96QR1 104 aa8.2□□□□□ -1.1
SMARCAL1-203ENST00000392128 CYSLTR1Q9Y271 337 aa8.2□□□□□ -1.1
SMARCAL1-203ENST00000392128 TSHBP01222 138 aa8.19□□□□□ -1.1
SMARCAL1-203ENST00000392128 CRYBA4P53673 196 aa8.19□□□□□ -1.1
SMARCAL1-203ENST00000392128 NEXN-AS1Q8NBZ9 246 aa8.19□□□□□ -1.1
SMARCAL1-203ENST00000392128 IGLC3P0DOY3 106 aa8.19□□□□□ -1.1
SMARCAL1-203ENST00000392128 ERASQ7Z444 233 aa8.19□□□□□ -1.1
SMARCAL1-203ENST00000392128 X6R8D5 127 aa8.19□□□□□ -1.1
SMARCAL1-203ENST00000392128 hDV102S1A0JD36 115 aa8.18□□□□□ -1.1
SMARCAL1-203ENST00000392128 Q6ZN92 141 aa8.18□□□□□ -1.1
SMARCAL1-203ENST00000392128 ZMAT4Q9H898 229 aa8.18□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms