RNA–Protein interactions for RNA: ENST00000390426.2

TRAV4-201, Transcript of T cell receptor alpha variable 4, humanhuman

APPRIS P1 BASIC

Gene TRAV4, Length 395 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV4-201ENST00000390426 CHCHD5Q9BSY4 110 aa6.98□□□□□ -1.29
TRAV4-201ENST00000390426 CHAC1Q9BUX1 264 aa6.98□□□□□ -1.29
TRAV4-201ENST00000390426 SSBP4Q9BWG4 385 aaPredicted RBP6.98□□□□□ -1.29
TRAV4-201ENST00000390426 C1orf43Q9BWL3 253 aa6.98□□□□□ -1.29
TRAV4-201ENST00000390426 H2AFB1P0C5Y9 115 aa6.97□□□□□ -1.29
TRAV4-201ENST00000390426 OR5AL1P0C617 328 aa6.97□□□□□ -1.29
TRAV4-201ENST00000390426 ZNF345Q14585 488 aa6.97□□□□□ -1.29
TRAV4-201ENST00000390426 NTM-AS1Q6ZSK4 140 aa6.97□□□□□ -1.29
TRAV4-201ENST00000390426 CIRBP-AS1Q8TBR5 109 aa6.97□□□□□ -1.29
TRAV4-201ENST00000390426 DEFB104AQ8WTQ1 72 aa6.97□□□□□ -1.29
TRAV4-201ENST00000390426 A0A0D9SG52 128 aa6.96□□□□□ -1.3
TRAV4-201ENST00000390426 KANTRA0A1W2PQU2 76 aa6.96□□□□□ -1.3
TRAV4-201ENST00000390426 KRTAP29-1A8MX34 341 aaPredicted RBP6.96□□□□□ -1.3
TRAV4-201ENST00000390426 BCL2L11O43521 198 aa6.96□□□□□ -1.3
TRAV4-201ENST00000390426 GAGE6Q13070 117 aa6.96□□□□□ -1.3
TRAV4-201ENST00000390426 C14orf177Q52M58 125 aa6.96□□□□□ -1.3
TRAV4-201ENST00000390426 SREK1IP1Q8N9Q2 155 aaPredicted RBP6.96□□□□□ -1.3
TRAV4-201ENST00000390426 KIF25-AS1Q9Y6Z4 181 aa6.96□□□□□ -1.3
TRAV4-201ENST00000390426 MYCBP2O75592 4640 aa6.95□□□□□ -1.3
TRAV4-201ENST00000390426 HMSDA8MTL9 139 aa6.95□□□□□ -1.3
TRAV4-201ENST00000390426 USP17L23D6RBM5 183 aa6.95□□□□□ -1.3
TRAV4-201ENST00000390426 HLA-DQA1P01909 254 aa6.95□□□□□ -1.3
TRAV4-201ENST00000390426 SMIM17P0DL12 118 aa6.95□□□□□ -1.3
TRAV4-201ENST00000390426 GZMBP10144 247 aa6.95□□□□□ -1.3
TRAV4-201ENST00000390426 RPL35P42766 123 aaKnown RBP6.95□□□□□ -1.3
TRAV4-201ENST00000390426 KRTAP10-4P60372 401 aaPredicted RBP6.95□□□□□ -1.3
TRAV4-201ENST00000390426 RBX1P62877 108 aa6.95□□□□□ -1.3
TRAV4-201ENST00000390426 CCL20P78556 96 aa6.95□□□□□ -1.3
TRAV4-201ENST00000390426 CLPSL2Q6UWE3 100 aa6.95□□□□□ -1.3
TRAV4-201ENST00000390426 DERL1Q9BUN8 251 aa6.95□□□□□ -1.3
TRAV4-201ENST00000390426 TPPP3Q9BW30 176 aa6.95□□□□□ -1.3
TRAV4-201ENST00000390426 GNG13Q9P2W3 67 aa6.95□□□□□ -1.3
TRAV4-201ENST00000390426 MGPP08493 103 aa6.94□□□□□ -1.3
TRAV4-201ENST00000390426 PKIAP61925 76 aa6.94□□□□□ -1.3
TRAV4-201ENST00000390426 EIF5AP63241 154 aaKnown RBP6.94□□□□□ -1.3
TRAV4-201ENST00000390426 TMEM97Q5BJF2 176 aa6.94□□□□□ -1.3
TRAV4-201ENST00000390426 AP1S3Q96PC3 154 aa6.94□□□□□ -1.3
TRAV4-201ENST00000390426 VAX2Q9UIW0 290 aa6.94□□□□□ -1.3
TRAV4-201ENST00000390426 IGLV2-8P01709 118 aa6.93□□□□□ -1.3
TRAV4-201ENST00000390426 PRSS1P07477 247 aa6.93□□□□□ -1.3
TRAV4-201ENST00000390426 MIAQ16674 131 aa6.93□□□□□ -1.3
TRAV4-201ENST00000390426 LINC00269Q8N2A0 174 aa6.93□□□□□ -1.3
TRAV4-201ENST00000390426 FER1L6-AS1Q8NA97 138 aa6.93□□□□□ -1.3
TRAV4-201ENST00000390426 OR2D3Q8NGH3 330 aa6.93□□□□□ -1.3
TRAV4-201ENST00000390426 C11orf52Q96A22 123 aa6.93□□□□□ -1.3
TRAV4-201ENST00000390426 DAZAP1Q96EP5 407 aaKnown RBP6.93□□□□□ -1.3
TRAV4-201ENST00000390426 TRBV25-1A0A075B6N4 114 aa6.92□□□□□ -1.3
TRAV4-201ENST00000390426 RAB19A4D1S5 217 aa6.92□□□□□ -1.3
TRAV4-201ENST00000390426 CENPWQ5EE01 88 aa6.92□□□□□ -1.3
TRAV4-201ENST00000390426 KRTAP26-1Q6PEX3 210 aa6.92□□□□□ -1.3
TRAV4-201ENST00000390426 MANBALQ9NQG1 85 aa6.92□□□□□ -1.3
TRAV4-201ENST00000390426 PRR34Q9NV39 138 aa6.92□□□□□ -1.3
TRAV4-201ENST00000390426 IGHV1-24A0A0C4DH33 117 aa6.91□□□□□ -1.3
TRAV4-201ENST00000390426 M0QY20 66 aa6.91□□□□□ -1.3
TRAV4-201ENST00000390426 IGLC6P0CF74 106 aa6.91□□□□□ -1.3
TRAV4-201ENST00000390426 RPS20P60866 119 aaKnown RBP6.91□□□□□ -1.3
TRAV4-201ENST00000390426 IQCJQ1A5X6 159 aa6.91□□□□□ -1.3
TRAV4-201ENST00000390426 SUMO4Q6EEV6 95 aa6.91□□□□□ -1.3
TRAV4-201ENST00000390426 DNAH8Q96JB1 4490 aa6.91□□□□□ -1.3
TRAV4-201ENST00000390426 IGLV10-54A0A075B6I4 117 aa6.9□□□□□ -1.3
TRAV4-201ENST00000390426 TRAV1-1A0A0B4J248 108 aa6.9□□□□□ -1.3
TRAV4-201ENST00000390426 C19orf71A6NCJ1 209 aa6.9□□□□□ -1.3
TRAV4-201ENST00000390426 H7C1H1 209 aa6.9□□□□□ -1.3
TRAV4-201ENST00000390426 NKX2-5P52952 324 aaPredicted RBP6.9□□□□□ -1.3
TRAV4-201ENST00000390426 RPL37AP61513 92 aaKnown RBP6.9□□□□□ -1.3
TRAV4-201ENST00000390426 CACNG7P62955 275 aa6.9□□□□□ -1.3
TRAV4-201ENST00000390426 DGAT2L7PQ6IED9 249 aa6.9□□□□□ -1.3
TRAV4-201ENST00000390426 C9orf163Q8N9P6 203 aa6.9□□□□□ -1.3
TRAV4-201ENST00000390426 GNG4P50150 75 aa6.89□□□□□ -1.31
TRAV4-201ENST00000390426 REG3AQ06141 175 aa6.89□□□□□ -1.31
TRAV4-201ENST00000390426 RASL11AQ6T310 242 aa6.89□□□□□ -1.31
TRAV4-201ENST00000390426 LYZL1Q6UWQ5 148 aa6.89□□□□□ -1.31
TRAV4-201ENST00000390426 C20orf203Q8NBC4 194 aa6.89□□□□□ -1.31
TRAV4-201ENST00000390426 TMEM243Q9BU79 118 aa6.89□□□□□ -1.31
TRAV4-201ENST00000390426 MED9Q9NWA0 146 aa6.89□□□□□ -1.31
TRAV4-201ENST00000390426 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.89□□□□□ -1.31
TRAV4-201ENST00000390426 IGLV4-60A0A075B6I1 120 aa6.88□□□□□ -1.31
TRAV4-201ENST00000390426 XKRY2A2RUG3 117 aa6.88□□□□□ -1.31
TRAV4-201ENST00000390426 F2Z2F3 143 aa6.88□□□□□ -1.31
TRAV4-201ENST00000390426 TEX46H3BTG2 121 aa6.88□□□□□ -1.31
TRAV4-201ENST00000390426 PANO1I0J062 215 aa6.88□□□□□ -1.31
TRAV4-201ENST00000390426 OXTP01178 125 aa6.88□□□□□ -1.31
TRAV4-201ENST00000390426 IFNA1P01562 189 aa6.88□□□□□ -1.31
TRAV4-201ENST00000390426 P01737 135 aa6.88□□□□□ -1.31
TRAV4-201ENST00000390426 RAB5CP51148 216 aa6.88□□□□□ -1.31
TRAV4-201ENST00000390426 SDIM1Q6ZPB5 146 aa6.88□□□□□ -1.31
TRAV4-201ENST00000390426 GFRA4Q9GZZ7 299 aa6.88□□□□□ -1.31
TRAV4-201ENST00000390426 TRBV20OR9-2A0A075B6H5 130 aa6.87□□□□□ -1.31
TRAV4-201ENST00000390426 hDV102S1A0JD36 115 aa6.87□□□□□ -1.31
TRAV4-201ENST00000390426 PDE6DO43924 150 aa6.87□□□□□ -1.31
TRAV4-201ENST00000390426 TRGC1P0CF51 173 aa6.87□□□□□ -1.31
TRAV4-201ENST00000390426 NTF3P20783 257 aa6.87□□□□□ -1.31
TRAV4-201ENST00000390426 SULT1A2P50226 295 aa6.87□□□□□ -1.31
TRAV4-201ENST00000390426 HNRNPA3P51991 378 aaKnown RBP6.87□□□□□ -1.31
TRAV4-201ENST00000390426 MEF2BQ02080 365 aaPredicted RBP6.87□□□□□ -1.31
TRAV4-201ENST00000390426 EIF5AL1Q6IS14 154 aaKnown RBP6.87□□□□□ -1.31
TRAV4-201ENST00000390426 CLRN3Q8NCR9 226 aa6.87□□□□□ -1.31
TRAV4-201ENST00000390426 SMIM12Q96EX1 92 aa6.87□□□□□ -1.31
TRAV4-201ENST00000390426 DPH3P1Q9H4G8 78 aa6.87□□□□□ -1.31
TRAV4-201ENST00000390426 NIT2Q9NQR4 276 aa6.87□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms