RNA–Protein interactions for RNA: ENST00000384438.1

RNU6-1340P-201, Transcript of RNA, U6 small nuclear 1340, pseudogene, humanhuman

BASIC

Gene RNU6-1340P, Length 107 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1340P-201ENST00000384438 BLOC1S6Q9UL45 172 aa-4.39□□□□□ -3.11
RNU6-1340P-201ENST00000384438 TET3O43151 1660 aa-4.39□□□□□ -3.11
RNU6-1340P-201ENST00000384438 PHLPP1O60346 1717 aa-4.4□□□□□ -3.11
RNU6-1340P-201ENST00000384438 ATAD2BQ9ULI0 1458 aa-4.4□□□□□ -3.11
RNU6-1340P-201ENST00000384438 TRBV11-1A0A0K0K1C0 115 aa-4.4□□□□□ -3.11
RNU6-1340P-201ENST00000384438 J3KRW8 73 aa-4.4□□□□□ -3.11
RNU6-1340P-201ENST00000384438 M0QY20 66 aa-4.4□□□□□ -3.11
RNU6-1340P-201ENST00000384438 APOC3P02656 99 aa-4.4□□□□□ -3.11
RNU6-1340P-201ENST00000384438 IFNA16P05015 189 aa-4.4□□□□□ -3.11
RNU6-1340P-201ENST00000384438 LINC00614P0C842 121 aa-4.4□□□□□ -3.11
RNU6-1340P-201ENST00000384438 RPA3P35244 121 aaPredicted RBP-4.4□□□□□ -3.11
RNU6-1340P-201ENST00000384438 CRYBA4P53673 196 aa-4.4□□□□□ -3.11
RNU6-1340P-201ENST00000384438 TPPP2P59282 170 aa-4.4□□□□□ -3.11
RNU6-1340P-201ENST00000384438 UBE2L3P68036 154 aaKnown RBP-4.4□□□□□ -3.11
RNU6-1340P-201ENST00000384438 STX4Q12846 297 aa-4.4□□□□□ -3.11
RNU6-1340P-201ENST00000384438 MSMO1Q15800 293 aa-4.4□□□□□ -3.11
RNU6-1340P-201ENST00000384438 SMIM7Q9BQ49 75 aa-4.4□□□□□ -3.11
RNU6-1340P-201ENST00000384438 NOP10Q9NPE3 64 aaKnown RBP-4.4□□□□□ -3.11
RNU6-1340P-201ENST00000384438 CHMP5Q9NZZ3 219 aa-4.4□□□□□ -3.11
RNU6-1340P-201ENST00000384438 RGPD8O14715 1765 aaPredicted RBP-4.4□□□□□ -3.11
RNU6-1340P-201ENST00000384438 RGPD5Q99666 1765 aa-4.4□□□□□ -3.11
RNU6-1340P-201ENST00000384438 SPHKAPQ2M3C7 1700 aa-4.41□□□□□ -3.11
RNU6-1340P-201ENST00000384438 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP-4.41□□□□□ -3.11
RNU6-1340P-201ENST00000384438 PDCD11Q14690 1871 aaKnown RBP-4.41□□□□□ -3.11
RNU6-1340P-201ENST00000384438 CCDC171Q6TFL3 1326 aa-4.41□□□□□ -3.11
RNU6-1340P-201ENST00000384438 A0A1B0GTQ1 180 aa-4.41□□□□□ -3.12
RNU6-1340P-201ENST00000384438 TMEM256-PLSCR3K7ERE1 68 aa-4.41□□□□□ -3.12
RNU6-1340P-201ENST00000384438 OMPP47874 163 aa-4.41□□□□□ -3.12
RNU6-1340P-201ENST00000384438 SHQ1Q6PI26 577 aaKnown RBP-4.41□□□□□ -3.12
RNU6-1340P-201ENST00000384438 TMEM107Q6UX40 140 aa-4.41□□□□□ -3.12
RNU6-1340P-201ENST00000384438 IFT81Q8WYA0 676 aa-4.41□□□□□ -3.12
RNU6-1340P-201ENST00000384438 C20orf27Q9GZN8 174 aa-4.41□□□□□ -3.12
RNU6-1340P-201ENST00000384438 MYH1P12882 1939 aa-4.41□□□□□ -3.12
RNU6-1340P-201ENST00000384438 NUP210LQ5VU65 1888 aa-4.41□□□□□ -3.12
RNU6-1340P-201ENST00000384438 NCOA2Q15596 1464 aa-4.42□□□□□ -3.12
RNU6-1340P-201ENST00000384438 A0A1B0GU69 56 aa-4.42□□□□□ -3.12
RNU6-1340P-201ENST00000384438 H3BQV1 296 aa-4.42□□□□□ -3.12
RNU6-1340P-201ENST00000384438 K7ERJ3 54 aa-4.42□□□□□ -3.12
RNU6-1340P-201ENST00000384438 SMIM10L2AP0DMW4 78 aa-4.42□□□□□ -3.12
RNU6-1340P-201ENST00000384438 SMIM10L2BP0DMW5 78 aa-4.42□□□□□ -3.12
RNU6-1340P-201ENST00000384438 GALP22466 123 aa-4.42□□□□□ -3.12
RNU6-1340P-201ENST00000384438 DDTP30046 118 aa-4.42□□□□□ -3.12
RNU6-1340P-201ENST00000384438 RGS8P57771 180 aaPredicted RBP-4.42□□□□□ -3.12
RNU6-1340P-201ENST00000384438 ANAPC15P60006 121 aa-4.42□□□□□ -3.12
RNU6-1340P-201ENST00000384438 TRAM1Q15629 374 aa-4.42□□□□□ -3.12
RNU6-1340P-201ENST00000384438 FKBP1CQ5VVH2 108 aa-4.42□□□□□ -3.12
RNU6-1340P-201ENST00000384438 Q6ZT83 130 aa-4.42□□□□□ -3.12
RNU6-1340P-201ENST00000384438 MMGT1Q8N4V1 131 aa-4.42□□□□□ -3.12
RNU6-1340P-201ENST00000384438 THOC2Q8NI27 1593 aaKnown RBP-4.42□□□□□ -3.12
RNU6-1340P-201ENST00000384438 LGALS14Q8TCE9 139 aa-4.42□□□□□ -3.12
RNU6-1340P-201ENST00000384438 SCLT1Q96NL6 688 aa-4.42□□□□□ -3.12
RNU6-1340P-201ENST00000384438 C20orf24Q9BUV8 137 aa-4.42□□□□□ -3.12
RNU6-1340P-201ENST00000384438 TIPINQ9BVW5 301 aa-4.42□□□□□ -3.12
RNU6-1340P-201ENST00000384438 TPPP3Q9BW30 176 aa-4.42□□□□□ -3.12
RNU6-1340P-201ENST00000384438 BEX2Q9BXY8 128 aa-4.42□□□□□ -3.12
RNU6-1340P-201ENST00000384438 TXLNGYQ9BZA5 131 aa-4.42□□□□□ -3.12
RNU6-1340P-201ENST00000384438 LRTM1Q9HBL6 345 aa-4.42□□□□□ -3.12
RNU6-1340P-201ENST00000384438 LINC01558Q9Y6Z2 57 aa-4.42□□□□□ -3.12
RNU6-1340P-201ENST00000384438 V9GYH0 126 aa-4.42□□□□□ -3.12
RNU6-1340P-201ENST00000384438 A2ML1A8K2U0 1454 aa-4.43□□□□□ -3.12
RNU6-1340P-201ENST00000384438 TRAV2A0A0B4J234 112 aa-4.43□□□□□ -3.12
RNU6-1340P-201ENST00000384438 FIBPO43427 364 aa-4.43□□□□□ -3.12
RNU6-1340P-201ENST00000384438 HPGDSO60760 199 aa-4.43□□□□□ -3.12
RNU6-1340P-201ENST00000384438 SNNO75324 88 aaPredicted RBP-4.43□□□□□ -3.12
RNU6-1340P-201ENST00000384438 ATP6V1C1P21283 382 aa-4.43□□□□□ -3.12
RNU6-1340P-201ENST00000384438 CCND2P30279 289 aa-4.43□□□□□ -3.12
RNU6-1340P-201ENST00000384438 SNCAP37840 140 aa-4.43□□□□□ -3.12
RNU6-1340P-201ENST00000384438 AP3S2P59780 193 aa-4.43□□□□□ -3.12
RNU6-1340P-201ENST00000384438 ATP6V1FQ16864 119 aa-4.43□□□□□ -3.12
RNU6-1340P-201ENST00000384438 CCDC184Q52MB2 194 aa-4.43□□□□□ -3.12
RNU6-1340P-201ENST00000384438 C10orf62Q5T681 223 aaPredicted RBP-4.43□□□□□ -3.12
RNU6-1340P-201ENST00000384438 DCUN1D2Q6PH85 259 aa-4.43□□□□□ -3.12
RNU6-1340P-201ENST00000384438 MAP1LC3AQ9H492 121 aa-4.43□□□□□ -3.12
RNU6-1340P-201ENST00000384438 SPANXB1Q9NS25 103 aaPredicted RBP-4.43□□□□□ -3.12
RNU6-1340P-201ENST00000384438 NCAPD3P42695 1498 aa-4.43□□□□□ -3.12
RNU6-1340P-201ENST00000384438 ROBO1Q9Y6N7 1651 aa-4.44□□□□□ -3.12
RNU6-1340P-201ENST00000384438 ZFYVE16Q7Z3T8 1539 aa-4.44□□□□□ -3.12
RNU6-1340P-201ENST00000384438 K7EN84 100 aa-4.44□□□□□ -3.12
RNU6-1340P-201ENST00000384438 FABP7O15540 132 aa-4.44□□□□□ -3.12
RNU6-1340P-201ENST00000384438 ATP6V1G2O95670 118 aa-4.44□□□□□ -3.12
RNU6-1340P-201ENST00000384438 IFNA4P05014 189 aa-4.44□□□□□ -3.12
RNU6-1340P-201ENST00000384438 WT1-ASQ06250 92 aa-4.44□□□□□ -3.12
RNU6-1340P-201ENST00000384438 ISOC2Q96AB3 205 aa-4.44□□□□□ -3.12
RNU6-1340P-201ENST00000384438 MAP1LC3BQ9GZQ8 125 aa-4.44□□□□□ -3.12
RNU6-1340P-201ENST00000384438 RTL9Q8NET4 1388 aa-4.44□□□□□ -3.12
RNU6-1340P-201ENST00000384438 MED14O60244 1454 aa-4.44□□□□□ -3.12
RNU6-1340P-201ENST00000384438 EIF4G3O43432 1585 aaKnown RBP-4.44□□□□□ -3.12
RNU6-1340P-201ENST00000384438 SUPT6HQ7KZ85 1726 aaKnown RBP-4.45□□□□□ -3.12
RNU6-1340P-201ENST00000384438 TRDV1A0A1B0GX56 115 aa-4.45□□□□□ -3.12
RNU6-1340P-201ENST00000384438 H7C1C5 153 aa-4.45□□□□□ -3.12
RNU6-1340P-201ENST00000384438 ENSAO43768 121 aaKnown RBP-4.45□□□□□ -3.12
RNU6-1340P-201ENST00000384438 SCGB2A1O75556 95 aa-4.45□□□□□ -3.12
RNU6-1340P-201ENST00000384438 GOSR1O95249 250 aa-4.45□□□□□ -3.12
RNU6-1340P-201ENST00000384438 TMBIM6P55061 237 aa-4.45□□□□□ -3.12
RNU6-1340P-201ENST00000384438 LCN6P62502 163 aa-4.45□□□□□ -3.12
RNU6-1340P-201ENST00000384438 MRPS36P82909 103 aaKnown RBP-4.45□□□□□ -3.12
RNU6-1340P-201ENST00000384438 C2orf76Q3KRA6 126 aa-4.45□□□□□ -3.12
RNU6-1340P-201ENST00000384438 C4orf50Q6ZRC1 276 aa-4.45□□□□□ -3.12
RNU6-1340P-201ENST00000384438 MGST2Q99735 147 aa-4.45□□□□□ -3.12
RNU6-1340P-201ENST00000384438 NT5C3AQ9H0P0 336 aa-4.45□□□□□ -3.12
Retrieved 100 of 20,778 RNA–protein pairs in 70.5 ms