RNA–Protein interactions for RNA: ENST00000381870.7

CTNS-202, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

TSL 1 (best) BASIC

Gene CTNS, Length 2,470 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-202ENST00000381870 B9A039 149 aa11.18□□□□□ -0.62
CTNS-202ENST00000381870 NPC2P61916 151 aa11.18□□□□□ -0.62
CTNS-202ENST00000381870 ZFHX3Q15911 3703 aa11.18□□□□□ -0.62
CTNS-202ENST00000381870 ADAMTSL4-AS1Q5T5F5 129 aa11.17□□□□□ -0.62
CTNS-202ENST00000381870 TRBV27A0A0K0K1C4 114 aa11.17□□□□□ -0.62
CTNS-202ENST00000381870 NXPH4O95158 308 aa11.17□□□□□ -0.62
CTNS-202ENST00000381870 DEFB121Q5J5C9 76 aa11.16□□□□□ -0.62
CTNS-202ENST00000381870 EEF1AKMT3Q96AZ1 226 aa11.16□□□□□ -0.62
CTNS-202ENST00000381870 A0A0J9YX75 114 aa11.16□□□□□ -0.62
CTNS-202ENST00000381870 CD3EP07766 207 aa11.16□□□□□ -0.62
CTNS-202ENST00000381870 FAM74A4Q5TZK3 123 aa11.16□□□□□ -0.62
CTNS-202ENST00000381870 TMEM101Q96IK0 257 aa11.16□□□□□ -0.62
CTNS-202ENST00000381870 SPXQ9BT56 116 aa11.16□□□□□ -0.62
CTNS-202ENST00000381870 OOSP1A8MZH6 123 aa11.15□□□□□ -0.62
CTNS-202ENST00000381870 IGHV3-30-3P0DP02 117 aa11.15□□□□□ -0.62
CTNS-202ENST00000381870 LOC107984640A0A0U1RRK4 108 aa11.15□□□□□ -0.62
CTNS-202ENST00000381870 LST1O00453 97 aa11.15□□□□□ -0.62
CTNS-202ENST00000381870 OVOL1O14753 267 aa11.15□□□□□ -0.62
CTNS-202ENST00000381870 IGHV1-69P01742 117 aa11.15□□□□□ -0.62
CTNS-202ENST00000381870 IGFL3Q6UXB1 125 aa11.15□□□□□ -0.62
CTNS-202ENST00000381870 FAM19A4Q96LR4 140 aa11.15□□□□□ -0.62
CTNS-202ENST00000381870 LINC00527Q9UJ94 153 aa11.15□□□□□ -0.62
CTNS-202ENST00000381870 ANKRD11Q6UB99 2663 aaPredicted RBP11.15□□□□□ -0.62
CTNS-202ENST00000381870 IGKV3-7A0A075B6H7 116 aa11.14□□□□□ -0.63
CTNS-202ENST00000381870 COX6CP09669 75 aa11.14□□□□□ -0.63
CTNS-202ENST00000381870 TRAV8-3A0A0A6YYJ7 113 aa11.14□□□□□ -0.63
CTNS-202ENST00000381870 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP11.14□□□□□ -0.63
CTNS-202ENST00000381870 I3L3M4 83 aa11.14□□□□□ -0.63
CTNS-202ENST00000381870 M0R1W7 72 aa11.14□□□□□ -0.63
CTNS-202ENST00000381870 NRGNQ92686 78 aa11.14□□□□□ -0.63
CTNS-202ENST00000381870 C9orf153Q5TBE3 101 aa11.13□□□□□ -0.63
CTNS-202ENST00000381870 SOCS3O14543 225 aa11.13□□□□□ -0.63
CTNS-202ENST00000381870 UNQ9165/PRO28630Q6UXU0 137 aa11.13□□□□□ -0.63
CTNS-202ENST00000381870 CSDC2Q9Y534 153 aaKnown RBP11.13□□□□□ -0.63
CTNS-202ENST00000381870 TRBV7-1A0A0A6YYK4 115 aa11.12□□□□□ -0.63
CTNS-202ENST00000381870 SMCR5Q8TEV8 140 aa11.12□□□□□ -0.63
CTNS-202ENST00000381870 IGLV4-3A0A075B6K6 122 aa11.12□□□□□ -0.63
CTNS-202ENST00000381870 RPL11P62913 178 aaKnown RBP11.12□□□□□ -0.63
CTNS-202ENST00000381870 NSUN5P1Q3KNT7 163 aa11.12□□□□□ -0.63
CTNS-202ENST00000381870 TIMM21Q9BVV7 248 aa11.12□□□□□ -0.63
CTNS-202ENST00000381870 KLK5Q9Y337 293 aaPredicted RBP11.12□□□□□ -0.63
CTNS-202ENST00000381870 TRBV6-5A0A0K0K1A5 114 aa11.11□□□□□ -0.63
CTNS-202ENST00000381870 A8MZ25 164 aa11.11□□□□□ -0.63
CTNS-202ENST00000381870 NDUFA7O95182 113 aa11.11□□□□□ -0.63
CTNS-202ENST00000381870 KLK9Q2XQG4 91 aa11.11□□□□□ -0.63
CTNS-202ENST00000381870 APRG1Q8IVJ8 170 aa11.11□□□□□ -0.63
CTNS-202ENST00000381870 C3orf22Q8N5N4 141 aa11.11□□□□□ -0.63
CTNS-202ENST00000381870 DNAJC30Q96LL9 226 aa11.11□□□□□ -0.63
CTNS-202ENST00000381870 KLK9Q9UKQ9 250 aa11.11□□□□□ -0.63
CTNS-202ENST00000381870 MED13LQ71F56 2210 aa11.11□□□□□ -0.63
CTNS-202ENST00000381870 PRRC2AP48634 2157 aaKnown RBP11.1□□□□□ -0.63
CTNS-202ENST00000381870 ATP5J2P56134 94 aa11.1□□□□□ -0.63
CTNS-202ENST00000381870 C20orf203Q8NBC4 194 aa11.1□□□□□ -0.63
CTNS-202ENST00000381870 TRBV12-3P01733 135 aa11.1□□□□□ -0.63
CTNS-202ENST00000381870 DUX5Q96PT3 197 aa11.1□□□□□ -0.63
CTNS-202ENST00000381870 M0QY20 66 aa11.09□□□□□ -0.63
CTNS-202ENST00000381870 HERVK_113P63121 156 aa11.09□□□□□ -0.63
CTNS-202ENST00000381870 RHOHQ15669 191 aa11.09□□□□□ -0.63
CTNS-202ENST00000381870 MIAQ16674 131 aa11.09□□□□□ -0.63
CTNS-202ENST00000381870 TMEM61Q8N0U2 210 aa11.09□□□□□ -0.63
CTNS-202ENST00000381870 SPANXDQ9BXN6 97 aa11.09□□□□□ -0.63
CTNS-202ENST00000381870 SPANXCQ9NY87 97 aa11.09□□□□□ -0.63
CTNS-202ENST00000381870 LY6DQ14210 128 aa11.09□□□□□ -0.63
CTNS-202ENST00000381870 MINOS1Q5TGZ0 78 aa11.09□□□□□ -0.63
CTNS-202ENST00000381870 NDUFA12Q9UI09 145 aa11.09□□□□□ -0.63
CTNS-202ENST00000381870 ASH1LQ9NR48 2969 aaKnown RBP11.09□□□□□ -0.63
CTNS-202ENST00000381870 NPFFO15130 113 aa11.08□□□□□ -0.64
CTNS-202ENST00000381870 DAND5Q8N907 189 aa11.08□□□□□ -0.64
CTNS-202ENST00000381870 LINC01560Q8TB33 94 aa11.08□□□□□ -0.64
CTNS-202ENST00000381870 IMUPQ9GZP8 106 aa11.08□□□□□ -0.64
CTNS-202ENST00000381870 RNASE13Q5GAN3 156 aaKnown RBP11.08□□□□□ -0.64
CTNS-202ENST00000381870 MINOS1-NBL1R4GNA1 71 aa11.08□□□□□ -0.64
CTNS-202ENST00000381870 TRAV12-3A0A0B4J271 114 aa11.07□□□□□ -0.64
CTNS-202ENST00000381870 UQCRQO14949 82 aa11.06□□□□□ -0.64
CTNS-202ENST00000381870 FAM104AQ969W3 186 aa11.06□□□□□ -0.64
CTNS-202ENST00000381870 IGHV1-58A0A0C4DH39 117 aa11.06□□□□□ -0.64
CTNS-202ENST00000381870 KLLNB2CW77 178 aa11.06□□□□□ -0.64
CTNS-202ENST00000381870 ZFP36P26651 326 aaKnown RBP11.06□□□□□ -0.64
CTNS-202ENST00000381870 DCANP1Q8TF63 244 aa11.06□□□□□ -0.64
CTNS-202ENST00000381870 LINC00526Q96FQ7 95 aa11.05□□□□□ -0.64
CTNS-202ENST00000381870 ACYP1P07311 99 aa11.04□□□□□ -0.64
CTNS-202ENST00000381870 CD28P10747 220 aa11.04□□□□□ -0.64
CTNS-202ENST00000381870 IGF2-ASQ6U949 168 aa11.04□□□□□ -0.64
CTNS-202ENST00000381870 LINC00643Q86TS7 51 aa11.04□□□□□ -0.64
CTNS-202ENST00000381870 MRPS36P82909 103 aaKnown RBP11.03□□□□□ -0.64
CTNS-202ENST00000381870 FAM19A5Q7Z5A7 132 aaPredicted RBP11.03□□□□□ -0.64
CTNS-202ENST00000381870 CITED2Q99967 270 aaPredicted RBP11.03□□□□□ -0.64
CTNS-202ENST00000381870 TRAV41A0A0B4J266 112 aa11.03□□□□□ -0.64
CTNS-202ENST00000381870 C5orf47Q569G3 176 aa11.02□□□□□ -0.64
CTNS-202ENST00000381870 VSIG2Q96IQ7 327 aa11.02□□□□□ -0.64
CTNS-202ENST00000381870 CACNA1AO00555 2505 aa11.02□□□□□ -0.65
CTNS-202ENST00000381870 IGHV3-16A0A0C4DH30 117 aa11.02□□□□□ -0.65
CTNS-202ENST00000381870 TMEM219Q86XT9 240 aa11.02□□□□□ -0.65
CTNS-202ENST00000381870 PTPRQQ9UMZ3 2332 aa11.02□□□□□ -0.65
CTNS-202ENST00000381870 GRNP28799 593 aaKnown RBP11.01□□□□□ -0.65
CTNS-202ENST00000381870 C9orf85Q96MD7 179 aa11.01□□□□□ -0.65
CTNS-202ENST00000381870 ITPR1Q14643 2758 aa11.01□□□□□ -0.65
CTNS-202ENST00000381870 TRAV12-2A0A075B6T6 113 aa11.01□□□□□ -0.65
CTNS-202ENST00000381870 J3KT08 172 aa11.01□□□□□ -0.65
CTNS-202ENST00000381870 SAA4P35542 130 aa11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms