RNA–Protein interactions for RNA: ENST00000381196.8

PTPRD-203, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTPRD, Length 9,911 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-203ENST00000381196 TP53TG1Q9Y2A0 90 aa3.82□□□□□ -1.8
PTPRD-203ENST00000381196 RUSC1-AS1Q66K80 236 aa3.82□□□□□ -1.8
PTPRD-203ENST00000381196 IGF2-ASQ6U949 168 aa3.82□□□□□ -1.8
PTPRD-203ENST00000381196 NFE4Q86UQ8 179 aa3.82□□□□□ -1.8
PTPRD-203ENST00000381196 SS18L2Q9UHA2 77 aa3.82□□□□□ -1.8
PTPRD-203ENST00000381196 MYCNOSP40205 109 aa3.82□□□□□ -1.8
PTPRD-203ENST00000381196 COX17Q14061 63 aa3.82□□□□□ -1.8
PTPRD-203ENST00000381196 LINC01600Q96MT4 127 aa3.82□□□□□ -1.8
PTPRD-203ENST00000381196 LY6HO94772 140 aa3.82□□□□□ -1.8
PTPRD-203ENST00000381196 FAM167A-AS1Q96KT0 104 aa3.82□□□□□ -1.8
PTPRD-203ENST00000381196 HELZ2Q9BYK8 2649 aaKnown RBP3.82□□□□□ -1.8
PTPRD-203ENST00000381196 AKAP13Q12802 2813 aa3.82□□□□□ -1.8
PTPRD-203ENST00000381196 BRI3O95415 125 aa3.82□□□□□ -1.8
PTPRD-203ENST00000381196 PSMB8P28062 276 aa3.82□□□□□ -1.8
PTPRD-203ENST00000381196 UBE2E1P51965 193 aa3.82□□□□□ -1.8
PTPRD-203ENST00000381196 IGHV3-64A0A075B6Q5 118 aa3.82□□□□□ -1.8
PTPRD-203ENST00000381196 TRBV10-1A0A0K0K1A3 114 aa3.82□□□□□ -1.8
PTPRD-203ENST00000381196 SMIM9A6NGZ8 99 aa3.82□□□□□ -1.8
PTPRD-203ENST00000381196 LINC00473A8K010 186 aa3.82□□□□□ -1.8
PTPRD-203ENST00000381196 NHLRC4P0CG21 123 aaPredicted RBP3.82□□□□□ -1.8
PTPRD-203ENST00000381196 ZNF837Q96EG3 531 aaPredicted RBP3.82□□□□□ -1.8
PTPRD-203ENST00000381196 FANCD2OSQ96PS1 177 aa3.82□□□□□ -1.8
PTPRD-203ENST00000381196 PROP1O75360 226 aa3.82□□□□□ -1.8
PTPRD-203ENST00000381196 E7EQL1 145 aa3.81□□□□□ -1.8
PTPRD-203ENST00000381196 IGKV1-39P01597 117 aa3.81□□□□□ -1.8
PTPRD-203ENST00000381196 IGKV1D-39P04432 117 aa3.81□□□□□ -1.8
PTPRD-203ENST00000381196 GNG5P63218 68 aa3.81□□□□□ -1.8
PTPRD-203ENST00000381196 NEXN-AS1Q8NBZ9 246 aa3.81□□□□□ -1.8
PTPRD-203ENST00000381196 UBE2E2Q96LR5 201 aa3.81□□□□□ -1.8
PTPRD-203ENST00000381196 KLK5Q9Y337 293 aaPredicted RBP3.81□□□□□ -1.8
PTPRD-203ENST00000381196 IGLV3-9A0A075B6K5 115 aa3.81□□□□□ -1.8
PTPRD-203ENST00000381196 LST1O00453 97 aa3.81□□□□□ -1.8
PTPRD-203ENST00000381196 IGLV1-44P01699 117 aa3.81□□□□□ -1.8
PTPRD-203ENST00000381196 C4orf48Q5BLP8 95 aa3.81□□□□□ -1.8
PTPRD-203ENST00000381196 Q6ZRM9 215 aa3.81□□□□□ -1.8
PTPRD-203ENST00000381196 OVOL3O00110 214 aa3.81□□□□□ -1.8
PTPRD-203ENST00000381196 TIRAPP58753 221 aa3.81□□□□□ -1.8
PTPRD-203ENST00000381196 C2orf91Q6ZV80 131 aa3.81□□□□□ -1.8
PTPRD-203ENST00000381196 LINC01561Q8N1V8 128 aa3.81□□□□□ -1.8
PTPRD-203ENST00000381196 B3GALT5-AS1P59052 145 aa3.81□□□□□ -1.8
PTPRD-203ENST00000381196 DUX4L9Q6RFH8 374 aaPredicted RBP3.81□□□□□ -1.8
PTPRD-203ENST00000381196 UBE2AP49459 152 aa3.81□□□□□ -1.8
PTPRD-203ENST00000381196 MRPL36Q9P0J6 103 aaKnown RBP3.81□□□□□ -1.8
PTPRD-203ENST00000381196 UTP20O75691 2785 aaKnown RBP3.81□□□□□ -1.8
PTPRD-203ENST00000381196 TRBV6-5A0A0K0K1A5 114 aa3.81□□□□□ -1.8
PTPRD-203ENST00000381196 IGHV3-53P01767 116 aa3.81□□□□□ -1.8
PTPRD-203ENST00000381196 TRAV26-2A0A0B4J265 109 aa3.81□□□□□ -1.8
PTPRD-203ENST00000381196 IGLC6P0CF74 106 aa3.81□□□□□ -1.8
PTPRD-203ENST00000381196 BUB1B-PAK6H3BSN5 160 aa3.81□□□□□ -1.8
PTPRD-203ENST00000381196 IGHV4OR15-8A0A075B7B6 117 aa3.8□□□□□ -1.8
PTPRD-203ENST00000381196 A0A087WW49 117 aa3.8□□□□□ -1.8
PTPRD-203ENST00000381196 NDUFA1O15239 70 aa3.8□□□□□ -1.8
PTPRD-203ENST00000381196 ASPHD1Q5U4P2 390 aa3.8□□□□□ -1.8
PTPRD-203ENST00000381196 MUSTN1Q8IVN3 82 aa3.8□□□□□ -1.8
PTPRD-203ENST00000381196 CSDC2Q9Y534 153 aaKnown RBP3.8□□□□□ -1.8
PTPRD-203ENST00000381196 RHPN1-AS1Q9BWJ2 59 aa3.8□□□□□ -1.8
PTPRD-203ENST00000381196 K7EMT4 169 aa3.8□□□□□ -1.8
PTPRD-203ENST00000381196 HIST2H2BCQ6DN03 193 aa3.8□□□□□ -1.8
PTPRD-203ENST00000381196 HIST2H2BDQ6DRA6 164 aa3.8□□□□□ -1.8
PTPRD-203ENST00000381196 NXPH4O95158 308 aa3.8□□□□□ -1.8
PTPRD-203ENST00000381196 GPHA2Q96T91 129 aa3.8□□□□□ -1.8
PTPRD-203ENST00000381196 A0A087WV48 116 aa3.8□□□□□ -1.8
PTPRD-203ENST00000381196 FXYD2P54710 66 aa3.8□□□□□ -1.8
PTPRD-203ENST00000381196 NTN5Q8WTR8 489 aaPredicted RBP3.8□□□□□ -1.8
PTPRD-203ENST00000381196 WFDC12Q8WWY7 111 aa3.8□□□□□ -1.8
PTPRD-203ENST00000381196 GAFA1Q96PS6 74 aa3.8□□□□□ -1.8
PTPRD-203ENST00000381196 SELENOKQ9Y6D0 94 aa3.8□□□□□ -1.8
PTPRD-203ENST00000381196 IGKV1D-43A0A0B4J1Z2 117 aa3.8□□□□□ -1.8
PTPRD-203ENST00000381196 SRRM4A7MD48 611 aaKnown RBP3.8□□□□□ -1.8
PTPRD-203ENST00000381196 BLCAPP62952 87 aa3.8□□□□□ -1.8
PTPRD-203ENST00000381196 C9orf66Q5T8R8 295 aa3.8□□□□□ -1.8
PTPRD-203ENST00000381196 CYYR1Q96J86 154 aa3.8□□□□□ -1.8
PTPRD-203ENST00000381196 OPRPNQ99935 248 aaPredicted RBP3.8□□□□□ -1.8
PTPRD-203ENST00000381196 ELANEP08246 267 aa3.79□□□□□ -1.8
PTPRD-203ENST00000381196 BAALC-AS2P0C853 105 aa3.79□□□□□ -1.8
PTPRD-203ENST00000381196 UBE2D1P51668 147 aa3.79□□□□□ -1.8
PTPRD-203ENST00000381196 VPREB3Q9UKI3 123 aa3.79□□□□□ -1.8
PTPRD-203ENST00000381196 TRAV7A0A075B6U4 112 aa3.79□□□□□ -1.8
PTPRD-203ENST00000381196 CCL24O00175 119 aa3.79□□□□□ -1.8
PTPRD-203ENST00000381196 DEFB131AP59861 70 aa3.79□□□□□ -1.8
PTPRD-203ENST00000381196 ETDCA0A1B0GVM5 59 aa3.79□□□□□ -1.8
PTPRD-203ENST00000381196 WI2-2373I1.2A0A1W2PRP0 233 aa3.79□□□□□ -1.8
PTPRD-203ENST00000381196 C14orf132Q9NPU4 83 aa3.79□□□□□ -1.8
PTPRD-203ENST00000381196 TFF1P04155 84 aa3.79□□□□□ -1.8
PTPRD-203ENST00000381196 HOXB4P17483 251 aaPredicted RBP3.79□□□□□ -1.8
PTPRD-203ENST00000381196 CXCL6P80162 114 aa3.79□□□□□ -1.8
PTPRD-203ENST00000381196 FAM120AOSQ5T036 256 aa3.79□□□□□ -1.8
PTPRD-203ENST00000381196 ZNF80P51504 273 aaPredicted RBP3.79□□□□□ -1.8
PTPRD-203ENST00000381196 FXYD7P58549 80 aa3.79□□□□□ -1.8
PTPRD-203ENST00000381196 DKK2Q9UBU2 259 aa3.78□□□□□ -1.8
PTPRD-203ENST00000381196 SBSPONQ8IVN8 264 aa3.78□□□□□ -1.8
PTPRD-203ENST00000381196 XCL2Q9UBD3 114 aa3.78□□□□□ -1.8
PTPRD-203ENST00000381196 DKK4Q9UBT3 224 aa3.78□□□□□ -1.8
PTPRD-203ENST00000381196 IBA57-AS1B1ANH7 110 aa3.78□□□□□ -1.8
PTPRD-203ENST00000381196 C5orf38Q86SI9 138 aa3.78□□□□□ -1.8
PTPRD-203ENST00000381196 CASC2Q6XLA1 102 aa3.78□□□□□ -1.8
PTPRD-203ENST00000381196 TCL1BO95988 128 aa3.78□□□□□ -1.8
PTPRD-203ENST00000381196 KIR2DL5BQ8NHK3 375 aa3.78□□□□□ -1.8
PTPRD-203ENST00000381196 IGHV1OR15-1A0A075B7D0 117 aa3.78□□□□□ -1.8
PTPRD-203ENST00000381196 IGHV3-73A0A0B4J1V6 119 aa3.78□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 173.4 ms