RNA–Protein interactions for RNA: ENST00000380833.8

CLCN4-202, Transcript of chloride voltage-gated channel 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLCN4, Length 6,750 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN4-202ENST00000380833 PRR20AP86496 221 aa8.33□□□□□ -1.08
CLCN4-202ENST00000380833 EDN2P20800 178 aa8.33□□□□□ -1.08
CLCN4-202ENST00000380833 DEFB1P60022 68 aa8.33□□□□□ -1.08
CLCN4-202ENST00000380833 PYGO1Q9Y3Y4 419 aa8.33□□□□□ -1.08
CLCN4-202ENST00000380833 RBBP6Q7Z6E9 1792 aaKnown RBP8.32□□□□□ -1.08
CLCN4-202ENST00000380833 TRBV7-6A0A0J9YX20 115 aa8.32□□□□□ -1.08
CLCN4-202ENST00000380833 IGLV2-18A0A075B6J9 118 aa8.32□□□□□ -1.08
CLCN4-202ENST00000380833 ZNF134P52741 427 aa8.32□□□□□ -1.08
CLCN4-202ENST00000380833 Q8N976 141 aa8.32□□□□□ -1.08
CLCN4-202ENST00000380833 SCN10AQ9Y5Y9 1956 aa8.32□□□□□ -1.08
CLCN4-202ENST00000380833 NDUFA4O00483 81 aa8.32□□□□□ -1.08
CLCN4-202ENST00000380833 H0Y9J4 135 aa8.31□□□□□ -1.08
CLCN4-202ENST00000380833 C17orf58Q2M2W7 97 aa8.31□□□□□ -1.08
CLCN4-202ENST00000380833 C9orf85Q96MD7 179 aa8.31□□□□□ -1.08
CLCN4-202ENST00000380833 PKDREJQ9NTG1 2253 aa8.31□□□□□ -1.08
CLCN4-202ENST00000380833 A0A0J9YXV3 536 aa8.31□□□□□ -1.08
CLCN4-202ENST00000380833 KIR2DL5BQ8NHK3 375 aa8.31□□□□□ -1.08
CLCN4-202ENST00000380833 IGLV2-33A0A075B6J2 118 aaPredicted RBP8.31□□□□□ -1.08
CLCN4-202ENST00000380833 CD164Q04900 197 aa8.31□□□□□ -1.08
CLCN4-202ENST00000380833 TICRRQ7Z2Z1 1910 aa8.31□□□□□ -1.08
CLCN4-202ENST00000380833 SPART-AS1P0CW21 52 aa8.31□□□□□ -1.08
CLCN4-202ENST00000380833 WT1P19544 449 aaPredicted RBP8.3□□□□□ -1.08
CLCN4-202ENST00000380833 IGKV1-6A0A0C4DH72 117 aa8.3□□□□□ -1.08
CLCN4-202ENST00000380833 EBI3Q14213 229 aa8.3□□□□□ -1.08
CLCN4-202ENST00000380833 FRMD6-AS1P0C7T7 363 aa8.3□□□□□ -1.08
CLCN4-202ENST00000380833 NFE4Q86UQ8 179 aa8.3□□□□□ -1.08
CLCN4-202ENST00000380833 PLAC8L1A1L4L8 177 aa8.29□□□□□ -1.08
CLCN4-202ENST00000380833 NDUFA4L2Q9NRX3 87 aa8.29□□□□□ -1.08
CLCN4-202ENST00000380833 KLK12Q9UKR0 248 aa8.29□□□□□ -1.08
CLCN4-202ENST00000380833 IGHV1-58A0A0C4DH39 117 aa8.29□□□□□ -1.08
CLCN4-202ENST00000380833 TMEM223A0PJW6 202 aa8.29□□□□□ -1.08
CLCN4-202ENST00000380833 TEX22C9J3V5 150 aa8.29□□□□□ -1.08
CLCN4-202ENST00000380833 INAFM1C9JVW0 142 aa8.29□□□□□ -1.08
CLCN4-202ENST00000380833 A8MZ25 164 aa8.29□□□□□ -1.08
CLCN4-202ENST00000380833 SCXQ7RTU7 201 aa8.29□□□□□ -1.08
CLCN4-202ENST00000380833 IGKV4-1P06312 121 aa8.29□□□□□ -1.08
CLCN4-202ENST00000380833 RPL39LQ96EH5 51 aaKnown RBP8.29□□□□□ -1.08
CLCN4-202ENST00000380833 SPAG11BQ08648 103 aa8.28□□□□□ -1.08
CLCN4-202ENST00000380833 RITA1Q96K30 269 aa8.28□□□□□ -1.08
CLCN4-202ENST00000380833 FAM215AQ9Y5M1 114 aa8.28□□□□□ -1.08
CLCN4-202ENST00000380833 TP53TG3Q9ULZ0 132 aa8.28□□□□□ -1.08
CLCN4-202ENST00000380833 TRBV7-3A0A075B6L6 115 aa8.28□□□□□ -1.08
CLCN4-202ENST00000380833 SMAD5-AS1Q9Y6J3 95 aa8.28□□□□□ -1.08
CLCN4-202ENST00000380833 A0A0J9YXY3 114 aa8.28□□□□□ -1.08
CLCN4-202ENST00000380833 PRYO14603 147 aa8.27□□□□□ -1.08
CLCN4-202ENST00000380833 WFDC10AQ9H1F0 79 aa8.27□□□□□ -1.09
CLCN4-202ENST00000380833 ZNF833PQ6ZTB9 187 aa8.27□□□□□ -1.09
CLCN4-202ENST00000380833 SIPA1L1O43166 1804 aa8.27□□□□□ -1.09
CLCN4-202ENST00000380833 WT1-ASQ06250 92 aa8.27□□□□□ -1.09
CLCN4-202ENST00000380833 PRR4Q16378 134 aa8.27□□□□□ -1.09
CLCN4-202ENST00000380833 A0A1B0GXF2 115 aa8.26□□□□□ -1.09
CLCN4-202ENST00000380833 LST1O00453 97 aa8.26□□□□□ -1.09
CLCN4-202ENST00000380833 AJUBAQ96IF1 538 aa8.26□□□□□ -1.09
CLCN4-202ENST00000380833 H7C423 109 aa8.26□□□□□ -1.09
CLCN4-202ENST00000380833 GREB1LQ9C091 1923 aaPredicted RBP8.26□□□□□ -1.09
CLCN4-202ENST00000380833 A0A0J9YWU9 116 aa8.26□□□□□ -1.09
CLCN4-202ENST00000380833 LY6G6CO95867 125 aa8.26□□□□□ -1.09
CLCN4-202ENST00000380833 IGF2-ASQ6U949 168 aa8.26□□□□□ -1.09
CLCN4-202ENST00000380833 HHLA3Q9XRX5 114 aa8.26□□□□□ -1.09
CLCN4-202ENST00000380833 NBASA2RRP1 2371 aa8.25□□□□□ -1.09
CLCN4-202ENST00000380833 FRMPD3Q5JV73 1810 aa8.25□□□□□ -1.09
CLCN4-202ENST00000380833 CRYGAP11844 174 aa8.25□□□□□ -1.09
CLCN4-202ENST00000380833 MAPKAPK5-AS1Q8N8E1 139 aa8.25□□□□□ -1.09
CLCN4-202ENST00000380833 ARID2Q68CP9 1835 aa8.25□□□□□ -1.09
CLCN4-202ENST00000380833 K7EQD1 137 aa8.25□□□□□ -1.09
CLCN4-202ENST00000380833 DIRC1Q969H9 104 aa8.25□□□□□ -1.09
CLCN4-202ENST00000380833 PTPRDP23468 1912 aa8.25□□□□□ -1.09
CLCN4-202ENST00000380833 ANK1P16157 1881 aa8.25□□□□□ -1.09
CLCN4-202ENST00000380833 ESRGQ1W209 222 aa8.25□□□□□ -1.09
CLCN4-202ENST00000380833 NRACQ8N912 160 aa8.24□□□□□ -1.09
CLCN4-202ENST00000380833 CTSZQ9UBR2 303 aa8.24□□□□□ -1.09
CLCN4-202ENST00000380833 ATRXP46100 2492 aa8.24□□□□□ -1.09
CLCN4-202ENST00000380833 KMT2EQ8IZD2 1858 aa8.24□□□□□ -1.09
CLCN4-202ENST00000380833 CDIP1Q9H305 208 aa8.24□□□□□ -1.09
CLCN4-202ENST00000380833 HIGD2AQ9BW72 106 aa8.24□□□□□ -1.09
CLCN4-202ENST00000380833 ZFAND3Q9H8U3 227 aa8.24□□□□□ -1.09
CLCN4-202ENST00000380833 LY6G6EA0A0G2JKS1 128 aa8.24□□□□□ -1.09
CLCN4-202ENST00000380833 U3KQA8 63 aa8.24□□□□□ -1.09
CLCN4-202ENST00000380833 PLXND1Q9Y4D7 1925 aa8.24□□□□□ -1.09
CLCN4-202ENST00000380833 ZGRF1Q86YA3 2104 aa8.23□□□□□ -1.09
CLCN4-202ENST00000380833 PLA2G2CQ5R387 149 aa8.23□□□□□ -1.09
CLCN4-202ENST00000380833 RPL39P62891 51 aaKnown RBP8.23□□□□□ -1.09
CLCN4-202ENST00000380833 C16orf74Q96GX8 76 aa8.23□□□□□ -1.09
CLCN4-202ENST00000380833 TRBV7-7A0A0K0K1E9 115 aa8.23□□□□□ -1.09
CLCN4-202ENST00000380833 LTBP1Q14766 1721 aa8.23□□□□□ -1.09
CLCN4-202ENST00000380833 C1orf147Q96MC9 270 aaPredicted RBP8.23□□□□□ -1.09
CLCN4-202ENST00000380833 A0A087WZ39 114 aa8.22□□□□□ -1.09
CLCN4-202ENST00000380833 MIR7-3HGQ8N6C7 128 aa8.22□□□□□ -1.09
CLCN4-202ENST00000380833 C11orf45Q8TAV5 145 aa8.22□□□□□ -1.09
CLCN4-202ENST00000380833 LCTP09848 1927 aa8.22□□□□□ -1.09
CLCN4-202ENST00000380833 PCNX2A6NKB5 2137 aa8.22□□□□□ -1.09
CLCN4-202ENST00000380833 FGF23Q9GZV9 251 aaPredicted RBP8.22□□□□□ -1.09
CLCN4-202ENST00000380833 C17orf82Q86X59 251 aaPredicted RBP8.22□□□□□ -1.09
CLCN4-202ENST00000380833 MSRB1Q9NZV6 116 aa8.22□□□□□ -1.09
CLCN4-202ENST00000380833 RIF1Q5UIP0 2472 aaKnown RBP8.21□□□□□ -1.09
CLCN4-202ENST00000380833 SBF1O95248 1867 aa8.21□□□□□ -1.09
CLCN4-202ENST00000380833 IGKV1-17P01599 117 aa8.21□□□□□ -1.1
CLCN4-202ENST00000380833 LINC00482Q8N8I6 264 aa8.21□□□□□ -1.1
CLCN4-202ENST00000380833 PROK2Q9HC23 129 aa8.21□□□□□ -1.1
CLCN4-202ENST00000380833 LENEPQ9Y5L5 61 aa8.21□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms