RNA–Protein interactions for RNA: ENST00000380741.8

SMN2-201, Transcript of survival of motor neuron 2, centromeric, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SMN2, Length 900 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN2-201ENST00000380741 PKHD1L1Q86WI1 4243 aa10.96□□□□□ -0.65
SMN2-201ENST00000380741 UMAD1C9J7I0 102 aa10.96□□□□□ -0.65
SMN2-201ENST00000380741 PFDN1O60925 122 aa10.96□□□□□ -0.65
SMN2-201ENST00000380741 ANGP03950 147 aaKnown RBP10.96□□□□□ -0.65
SMN2-201ENST00000380741 OR5AL1P0C617 328 aa10.96□□□□□ -0.65
SMN2-201ENST00000380741 C14orf177Q52M58 125 aa10.96□□□□□ -0.65
SMN2-201ENST00000380741 SPANXN1Q5VSR9 72 aa10.96□□□□□ -0.65
SMN2-201ENST00000380741 CHCHD5Q9BSY4 110 aa10.96□□□□□ -0.65
SMN2-201ENST00000380741 F5H697 171 aa10.95□□□□□ -0.66
SMN2-201ENST00000380741 SSTP61278 116 aa10.95□□□□□ -0.66
SMN2-201ENST00000380741 HLA-DQA1P01909 254 aa10.94□□□□□ -0.66
SMN2-201ENST00000380741 NTM-AS1Q6ZSK4 140 aa10.94□□□□□ -0.66
SMN2-201ENST00000380741 SREK1IP1Q8N9Q2 155 aaPredicted RBP10.94□□□□□ -0.66
SMN2-201ENST00000380741 VAX2Q9UIW0 290 aa10.94□□□□□ -0.66
SMN2-201ENST00000380741 USP17L23D6RBM5 183 aa10.93□□□□□ -0.66
SMN2-201ENST00000380741 PKIAP61925 76 aa10.93□□□□□ -0.66
SMN2-201ENST00000380741 MIAQ16674 131 aa10.93□□□□□ -0.66
SMN2-201ENST00000380741 TMUB2Q71RG4 321 aa10.93□□□□□ -0.66
SMN2-201ENST00000380741 KIF25-AS1Q9Y6Z4 181 aa10.93□□□□□ -0.66
SMN2-201ENST00000380741 IGLV2-8P01709 118 aa10.92□□□□□ -0.66
SMN2-201ENST00000380741 H2AFB1P0C5Y9 115 aa10.92□□□□□ -0.66
SMN2-201ENST00000380741 RPL35P42766 123 aaKnown RBP10.92□□□□□ -0.66
SMN2-201ENST00000380741 CLPSL2Q6UWE3 100 aa10.92□□□□□ -0.66
SMN2-201ENST00000380741 AP1S3Q96PC3 154 aa10.92□□□□□ -0.66
SMN2-201ENST00000380741 HMCN2Q8NDA2 5059 aa10.91□□□□□ -0.66
SMN2-201ENST00000380741 HMSDA8MTL9 139 aa10.91□□□□□ -0.66
SMN2-201ENST00000380741 BCL2L11O43521 198 aa10.91□□□□□ -0.66
SMN2-201ENST00000380741 SMIM17P0DL12 118 aa10.91□□□□□ -0.66
SMN2-201ENST00000380741 RBX1P62877 108 aa10.91□□□□□ -0.66
SMN2-201ENST00000380741 GAGE6Q13070 117 aa10.91□□□□□ -0.66
SMN2-201ENST00000380741 TMEM97Q5BJF2 176 aa10.91□□□□□ -0.66
SMN2-201ENST00000380741 DERL1Q9BUN8 251 aa10.91□□□□□ -0.66
SMN2-201ENST00000380741 PRR34Q9NV39 138 aa10.91□□□□□ -0.66
SMN2-201ENST00000380741 A0A0D9SG52 128 aa10.9□□□□□ -0.66
SMN2-201ENST00000380741 KANTRA0A1W2PQU2 76 aa10.9□□□□□ -0.66
SMN2-201ENST00000380741 PRSS1P07477 247 aa10.9□□□□□ -0.66
SMN2-201ENST00000380741 LINC00269Q8N2A0 174 aa10.9□□□□□ -0.66
SMN2-201ENST00000380741 TRBV25-1A0A075B6N4 114 aa10.89□□□□□ -0.67
SMN2-201ENST00000380741 GZMBP10144 247 aa10.89□□□□□ -0.67
SMN2-201ENST00000380741 KRTAP26-1Q6PEX3 210 aa10.89□□□□□ -0.67
SMN2-201ENST00000380741 CCL20P78556 96 aa10.88□□□□□ -0.67
SMN2-201ENST00000380741 C11orf52Q96A22 123 aa10.88□□□□□ -0.67
SMN2-201ENST00000380741 TPPP3Q9BW30 176 aa10.88□□□□□ -0.67
SMN2-201ENST00000380741 M0QY20 66 aa10.87□□□□□ -0.67
SMN2-201ENST00000380741 OXTP01178 125 aa10.87□□□□□ -0.67
SMN2-201ENST00000380741 MGPP08493 103 aa10.87□□□□□ -0.67
SMN2-201ENST00000380741 IGLC6P0CF74 106 aa10.87□□□□□ -0.67
SMN2-201ENST00000380741 IQCJQ1A5X6 159 aa10.87□□□□□ -0.67
SMN2-201ENST00000380741 CENPWQ5EE01 88 aa10.87□□□□□ -0.67
SMN2-201ENST00000380741 DGAT2L7PQ6IED9 249 aa10.87□□□□□ -0.67
SMN2-201ENST00000380741 FER1L6-AS1Q8NA97 138 aa10.87□□□□□ -0.67
SMN2-201ENST00000380741 MANBALQ9NQG1 85 aa10.87□□□□□ -0.67
SMN2-201ENST00000380741 GNG13Q9P2W3 67 aa10.87□□□□□ -0.67
SMN2-201ENST00000380741 IGHV1-24A0A0C4DH33 117 aa10.86□□□□□ -0.67
SMN2-201ENST00000380741 RPL37AP61513 92 aaKnown RBP10.86□□□□□ -0.67
SMN2-201ENST00000380741 EIF5AP63241 154 aaKnown RBP10.86□□□□□ -0.67
SMN2-201ENST00000380741 SUMO4Q6EEV6 95 aa10.86□□□□□ -0.67
SMN2-201ENST00000380741 C9orf163Q8N9P6 203 aa10.86□□□□□ -0.67
SMN2-201ENST00000380741 OR2D3Q8NGH3 330 aa10.85□□□□□ -0.67
SMN2-201ENST00000380741 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP10.85□□□□□ -0.67
SMN2-201ENST00000380741 IGLV10-54A0A075B6I4 117 aa10.84□□□□□ -0.67
SMN2-201ENST00000380741 C19orf71A6NCJ1 209 aa10.84□□□□□ -0.67
SMN2-201ENST00000380741 H7C1H1 209 aa10.84□□□□□ -0.67
SMN2-201ENST00000380741 REG3AQ06141 175 aa10.84□□□□□ -0.67
SMN2-201ENST00000380741 DAZAP1Q96EP5 407 aaKnown RBP10.84□□□□□ -0.67
SMN2-201ENST00000380741 TRAV1-1A0A0B4J248 108 aa10.83□□□□□ -0.68
SMN2-201ENST00000380741 RAB19A4D1S5 217 aa10.83□□□□□ -0.68
SMN2-201ENST00000380741 PANO1I0J062 215 aa10.83□□□□□ -0.68
SMN2-201ENST00000380741 HNRNPA3P51991 378 aaKnown RBP10.83□□□□□ -0.68
SMN2-201ENST00000380741 NKX2-5P52952 324 aaPredicted RBP10.83□□□□□ -0.68
SMN2-201ENST00000380741 RPS20P60866 119 aaKnown RBP10.83□□□□□ -0.68
SMN2-201ENST00000380741 CACNG7P62955 275 aa10.83□□□□□ -0.68
SMN2-201ENST00000380741 SERTAD4-AS1Q5TG53 156 aa10.83□□□□□ -0.68
SMN2-201ENST00000380741 C20orf203Q8NBC4 194 aa10.83□□□□□ -0.68
SMN2-201ENST00000380741 GNG4P50150 75 aa10.82□□□□□ -0.68
SMN2-201ENST00000380741 CLRN3Q8NCR9 226 aa10.82□□□□□ -0.68
SMN2-201ENST00000380741 IGLV4-60A0A075B6I1 120 aa10.81□□□□□ -0.68
SMN2-201ENST00000380741 RASL11AQ6T310 242 aa10.81□□□□□ -0.68
SMN2-201ENST00000380741 SDIM1Q6ZPB5 146 aa10.81□□□□□ -0.68
SMN2-201ENST00000380741 SMIM12Q96EX1 92 aa10.81□□□□□ -0.68
SMN2-201ENST00000380741 TMEM243Q9BU79 118 aa10.81□□□□□ -0.68
SMN2-201ENST00000380741 GFRA4Q9GZZ7 299 aa10.81□□□□□ -0.68
SMN2-201ENST00000380741 TRBV20OR9-2A0A075B6H5 130 aa10.8□□□□□ -0.68
SMN2-201ENST00000380741 A0A1B0GUV1 79 aa10.8□□□□□ -0.68
SMN2-201ENST00000380741 hDV102S1A0JD36 115 aa10.8□□□□□ -0.68
SMN2-201ENST00000380741 F2Z2F3 143 aa10.8□□□□□ -0.68
SMN2-201ENST00000380741 P01737 135 aa10.8□□□□□ -0.68
SMN2-201ENST00000380741 RAB5CP51148 216 aa10.8□□□□□ -0.68
SMN2-201ENST00000380741 CNBPP62633 177 aaKnown RBP10.8□□□□□ -0.68
SMN2-201ENST00000380741 MEF2BQ02080 365 aaPredicted RBP10.8□□□□□ -0.68
SMN2-201ENST00000380741 LYZL1Q6UWQ5 148 aa10.8□□□□□ -0.68
SMN2-201ENST00000380741 UBR4Q5T4S7 5183 aa10.8□□□□□ -0.68
SMN2-201ENST00000380741 TRAV8-4A0A0B4J246 113 aa10.79□□□□□ -0.68
SMN2-201ENST00000380741 XKRY2A2RUG3 117 aa10.79□□□□□ -0.68
SMN2-201ENST00000380741 TEX46H3BTG2 121 aa10.79□□□□□ -0.68
SMN2-201ENST00000380741 IFNA1P01562 189 aa10.79□□□□□ -0.68
SMN2-201ENST00000380741 TRGC1P0CF51 173 aa10.79□□□□□ -0.68
SMN2-201ENST00000380741 PGLYRP4Q96LB8 373 aa10.79□□□□□ -0.68
SMN2-201ENST00000380741 DPH3P1Q9H4G8 78 aa10.79□□□□□ -0.68
SMN2-201ENST00000380741 NIT2Q9NQR4 276 aa10.79□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 88.8 ms