RNA–Protein interactions for RNA: ENST00000379989.6

CDKL5-201, Transcript of cyclin dependent kinase like 5, humanhuman

TSL 1 (best) BASIC

Gene CDKL5, Length 3,463 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-201ENST00000379989 APELAP0DMC3 54 aa5.59□□□□□ -1.51
CDKL5-201ENST00000379989 SUMO2P61956 95 aaKnown RBP5.59□□□□□ -1.51
CDKL5-201ENST00000379989 LYPD2Q6UXB3 125 aa5.59□□□□□ -1.51
CDKL5-201ENST00000379989 IGHV3OR16-10A0A075B7F0 116 aa5.58□□□□□ -1.52
CDKL5-201ENST00000379989 USP17L23D6RBM5 183 aa5.58□□□□□ -1.52
CDKL5-201ENST00000379989 CCL3L1P16619 93 aa5.58□□□□□ -1.52
CDKL5-201ENST00000379989 DLX1P56177 255 aa5.58□□□□□ -1.52
CDKL5-201ENST00000379989 SMG1Q96Q15 3661 aaKnown RBP5.58□□□□□ -1.52
CDKL5-201ENST00000379989 FAM223BA6NKX1 122 aa5.58□□□□□ -1.52
CDKL5-201ENST00000379989 RNF223E7ERA6 249 aa5.58□□□□□ -1.52
CDKL5-201ENST00000379989 TIRAPP58753 221 aa5.58□□□□□ -1.52
CDKL5-201ENST00000379989 DAZ2Q13117 558 aaKnown RBP5.58□□□□□ -1.52
CDKL5-201ENST00000379989 DAZ4Q86SG3 579 aaKnown RBP5.58□□□□□ -1.52
CDKL5-201ENST00000379989 LINC01560Q8TB33 94 aa5.58□□□□□ -1.52
CDKL5-201ENST00000379989 DAZ1Q9NQZ3 744 aaKnown RBP5.58□□□□□ -1.52
CDKL5-201ENST00000379989 DAZ3Q9NR90 486 aaKnown RBP5.58□□□□□ -1.52
CDKL5-201ENST00000379989 ITPR1Q14643 2758 aa5.58□□□□□ -1.52
CDKL5-201ENST00000379989 MUC6Q6W4X9 2439 aa5.58□□□□□ -1.52
CDKL5-201ENST00000379989 IGKV3D-20A0A0C4DH25 116 aa5.58□□□□□ -1.52
CDKL5-201ENST00000379989 DAND5Q8N907 189 aa5.58□□□□□ -1.52
CDKL5-201ENST00000379989 RPL39LQ96EH5 51 aaKnown RBP5.58□□□□□ -1.52
CDKL5-201ENST00000379989 TMEM243Q9BU79 118 aa5.58□□□□□ -1.52
CDKL5-201ENST00000379989 CADP27708 2225 aa5.58□□□□□ -1.52
CDKL5-201ENST00000379989 BUB3O43684 328 aa5.57□□□□□ -1.52
CDKL5-201ENST00000379989 CIRBPQ14011 172 aaKnown RBP5.57□□□□□ -1.52
CDKL5-201ENST00000379989 C6orf226Q5I0X4 101 aa5.57□□□□□ -1.52
CDKL5-201ENST00000379989 FAM19A1Q7Z5A9 133 aa5.57□□□□□ -1.52
CDKL5-201ENST00000379989 ITLN2Q8WWU7 325 aaPredicted RBP5.57□□□□□ -1.52
CDKL5-201ENST00000379989 C11orf21Q9P2W6 132 aa5.57□□□□□ -1.52
CDKL5-201ENST00000379989 LOC400499M0QZD8 3231 aa5.57□□□□□ -1.52
CDKL5-201ENST00000379989 IGKV3D-7A0A0C4DH55 119 aa5.57□□□□□ -1.52
CDKL5-201ENST00000379989 IGHV7-4-1A0A0J9YVY3 117 aa5.57□□□□□ -1.52
CDKL5-201ENST00000379989 IGKV1-17P01599 117 aa5.57□□□□□ -1.52
CDKL5-201ENST00000379989 PDE6HQ13956 83 aa5.57□□□□□ -1.52
CDKL5-201ENST00000379989 MRGPRG-AS1Q2M3A8 158 aa5.57□□□□□ -1.52
CDKL5-201ENST00000379989 LITAFQ99732 161 aa5.57□□□□□ -1.52
CDKL5-201ENST00000379989 C22orf24Q9Y442 160 aa5.57□□□□□ -1.52
CDKL5-201ENST00000379989 ARHGAP32A7KAX9 2087 aa5.57□□□□□ -1.52
CDKL5-201ENST00000379989 A0A0U1RRA0 63 aa5.57□□□□□ -1.52
CDKL5-201ENST00000379989 LEPROTO15243 131 aa5.57□□□□□ -1.52
CDKL5-201ENST00000379989 ZNF580Q9UK33 172 aa5.57□□□□□ -1.52
CDKL5-201ENST00000379989 EP300Q09472 2414 aaPredicted RBP5.56□□□□□ -1.52
CDKL5-201ENST00000379989 A0A0J9YXY3 114 aa5.56□□□□□ -1.52
CDKL5-201ENST00000379989 IGIPA6NJ69 53 aa5.56□□□□□ -1.52
CDKL5-201ENST00000379989 CACNA1AO00555 2505 aa5.56□□□□□ -1.52
CDKL5-201ENST00000379989 IGHV3-64A0A075B6Q5 118 aa5.56□□□□□ -1.52
CDKL5-201ENST00000379989 TRAV12-3A0A0B4J271 114 aa5.56□□□□□ -1.52
CDKL5-201ENST00000379989 C20orf173Q96LM9 149 aa5.56□□□□□ -1.52
CDKL5-201ENST00000379989 SLC50A1Q9BRV3 221 aa5.56□□□□□ -1.52
CDKL5-201ENST00000379989 SMIM26A0A096LP01 95 aa5.55□□□□□ -1.52
CDKL5-201ENST00000379989 SDHAF1A6NFY7 115 aa5.55□□□□□ -1.52
CDKL5-201ENST00000379989 DYNAPQ8N1N2 210 aa5.55□□□□□ -1.52
CDKL5-201ENST00000379989 GVINP1Q7Z2Y8 2422 aa5.55□□□□□ -1.52
CDKL5-201ENST00000379989 ZNF876PQ49A33 203 aa5.55□□□□□ -1.52
CDKL5-201ENST00000379989 IGFL4Q6B9Z1 124 aa5.55□□□□□ -1.52
CDKL5-201ENST00000379989 Q8N6K4 173 aa5.55□□□□□ -1.52
CDKL5-201ENST00000379989 ZZEF1O43149 2961 aa5.55□□□□□ -1.52
CDKL5-201ENST00000379989 A0A0J9YX75 114 aa5.55□□□□□ -1.52
CDKL5-201ENST00000379989 DMXL2Q8TDJ6 3036 aa5.54□□□□□ -1.52
CDKL5-201ENST00000379989 IGHV4-4A0A075B6R2 117 aa5.54□□□□□ -1.52
CDKL5-201ENST00000379989 ADAMTSL4-AS1Q5T5F5 129 aa5.54□□□□□ -1.52
CDKL5-201ENST00000379989 SPANXN1Q5VSR9 72 aa5.54□□□□□ -1.52
CDKL5-201ENST00000379989 Q6JHZ5 121 aa5.54□□□□□ -1.52
CDKL5-201ENST00000379989 IGHV1-69DA0A0B4J2H0 117 aa5.54□□□□□ -1.52
CDKL5-201ENST00000379989 RPL39P62891 51 aaKnown RBP5.54□□□□□ -1.52
CDKL5-201ENST00000379989 TMEM61Q8N0U2 210 aa5.54□□□□□ -1.52
CDKL5-201ENST00000379989 KRTAP3-3Q9BYR6 98 aa5.54□□□□□ -1.52
CDKL5-201ENST00000379989 KRTAP3-2Q9BYR7 98 aa5.54□□□□□ -1.52
CDKL5-201ENST00000379989 CNOT1A5YKK6 2376 aaKnown RBP5.54□□□□□ -1.52
CDKL5-201ENST00000379989 ADARB2-AS1A8MUL3 147 aa5.54□□□□□ -1.52
CDKL5-201ENST00000379989 TEX22C9J3V5 150 aa5.54□□□□□ -1.52
CDKL5-201ENST00000379989 LYPD5Q6UWN5 251 aa5.54□□□□□ -1.52
CDKL5-201ENST00000379989 DEFB104AQ8WTQ1 72 aa5.54□□□□□ -1.52
CDKL5-201ENST00000379989 LINC00474Q9P2X8 69 aa5.54□□□□□ -1.52
CDKL5-201ENST00000379989 H3BUA1 57 aa5.53□□□□□ -1.52
CDKL5-201ENST00000379989 H7BZZ5 65 aa5.53□□□□□ -1.52
CDKL5-201ENST00000379989 I3L2K1 104 aa5.53□□□□□ -1.52
CDKL5-201ENST00000379989 BEAN1Q3B7T3 259 aa5.53□□□□□ -1.52
CDKL5-201ENST00000379989 C20orf197Q8N268 126 aa5.53□□□□□ -1.52
CDKL5-201ENST00000379989 DSPP15924 2871 aaKnown RBP5.53□□□□□ -1.52
CDKL5-201ENST00000379989 XCL1P47992 114 aa5.53□□□□□ -1.52
CDKL5-201ENST00000379989 RNF182Q8N6D2 247 aa5.53□□□□□ -1.52
CDKL5-201ENST00000379989 XCL2Q9UBD3 114 aa5.53□□□□□ -1.52
CDKL5-201ENST00000379989 UBE2D4Q9Y2X8 147 aa5.53□□□□□ -1.52
CDKL5-201ENST00000379989 ATMQ13315 3056 aa5.52□□□□□ -1.53
CDKL5-201ENST00000379989 KNCNA6PVL3 124 aa5.52□□□□□ -1.53
CDKL5-201ENST00000379989 BAALC-AS2P0C853 105 aa5.52□□□□□ -1.53
CDKL5-201ENST00000379989 INAFM2P0DMQ5 153 aa5.52□□□□□ -1.53
CDKL5-201ENST00000379989 SS18Q15532 418 aa5.52□□□□□ -1.53
CDKL5-201ENST00000379989 VMO1Q7Z5L0 202 aa5.52□□□□□ -1.53
CDKL5-201ENST00000379989 URB1O60287 2271 aaKnown RBP5.52□□□□□ -1.53
CDKL5-201ENST00000379989 GHRHP01286 108 aa5.52□□□□□ -1.53
CDKL5-201ENST00000379989 TMEM141Q96I45 108 aa5.52□□□□□ -1.53
CDKL5-201ENST00000379989 PRAC2D3DTV9 90 aa5.51□□□□□ -1.53
CDKL5-201ENST00000379989 IGHG2P01859 326 aa5.51□□□□□ -1.53
CDKL5-201ENST00000379989 TIMM17AQ99595 171 aa5.51□□□□□ -1.53
CDKL5-201ENST00000379989 RETNQ9HD89 108 aa5.51□□□□□ -1.53
CDKL5-201ENST00000379989 COX7A2LO14548 114 aa5.51□□□□□ -1.53
CDKL5-201ENST00000379989 MIAQ16674 131 aa5.51□□□□□ -1.53
CDKL5-201ENST00000379989 FAM110DQ8TAY7 271 aaPredicted RBP5.51□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 155 ms