RNA–Protein interactions for RNA: ENST00000379826.4

SMAD9-202, Transcript of SMAD family member 9, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SMAD9, Length 5,592 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD9-202ENST00000379826 COPS9Q8WXC6 57 aa8.58□□□□□ -1.04
SMAD9-202ENST00000379826 IGHV4-59P01825 116 aa8.58□□□□□ -1.04
SMAD9-202ENST00000379826 P0DMU3 169 aa8.58□□□□□ -1.04
SMAD9-202ENST00000379826 FAM231AP0DMU4 169 aa8.58□□□□□ -1.04
SMAD9-202ENST00000379826 FAM231CP0DMU5 169 aa8.58□□□□□ -1.04
SMAD9-202ENST00000379826 DEFB136Q30KP8 78 aa8.58□□□□□ -1.04
SMAD9-202ENST00000379826 ZFAND2AQ8N6M9 145 aa8.57□□□□□ -1.04
SMAD9-202ENST00000379826 CRPP02741 224 aa8.57□□□□□ -1.04
SMAD9-202ENST00000379826 TRAV26-1A0A087WT03 109 aa8.57□□□□□ -1.04
SMAD9-202ENST00000379826 DNAL4O96015 105 aa8.57□□□□□ -1.04
SMAD9-202ENST00000379826 CARD19Q96LW7 228 aa8.57□□□□□ -1.04
SMAD9-202ENST00000379826 DSCAML1Q8TD84 2053 aa8.57□□□□□ -1.04
SMAD9-202ENST00000379826 CHD8Q9HCK8 2581 aa8.57□□□□□ -1.04
SMAD9-202ENST00000379826 EDN2P20800 178 aa8.57□□□□□ -1.04
SMAD9-202ENST00000379826 CNFNQ9BYD5 112 aa8.57□□□□□ -1.04
SMAD9-202ENST00000379826 TRBV7-3A0A075B6L6 115 aa8.56□□□□□ -1.04
SMAD9-202ENST00000379826 TRBV7-9A0A0J9YWB2 115 aa8.56□□□□□ -1.04
SMAD9-202ENST00000379826 XCL2Q9UBD3 114 aa8.56□□□□□ -1.04
SMAD9-202ENST00000379826 FRYLO94915 3013 aa8.56□□□□□ -1.04
SMAD9-202ENST00000379826 CFHR3Q02985 330 aa8.56□□□□□ -1.04
SMAD9-202ENST00000379826 EBI3Q14213 229 aa8.56□□□□□ -1.04
SMAD9-202ENST00000379826 Q6ZS46 218 aa8.56□□□□□ -1.04
SMAD9-202ENST00000379826 SMR3AQ99954 134 aa8.56□□□□□ -1.04
SMAD9-202ENST00000379826 TCTEX1D4Q5JR98 221 aa8.56□□□□□ -1.04
SMAD9-202ENST00000379826 C11orf71Q6IPW1 123 aa8.55□□□□□ -1.04
SMAD9-202ENST00000379826 CLEC2BQ92478 149 aa8.55□□□□□ -1.04
SMAD9-202ENST00000379826 IGLV2-18A0A075B6J9 118 aa8.55□□□□□ -1.04
SMAD9-202ENST00000379826 RHODO00212 210 aa8.55□□□□□ -1.04
SMAD9-202ENST00000379826 RHOHQ15669 191 aa8.55□□□□□ -1.04
SMAD9-202ENST00000379826 Q6ZUT4 128 aa8.55□□□□□ -1.04
SMAD9-202ENST00000379826 C15orf53Q8NAA6 179 aa8.55□□□□□ -1.04
SMAD9-202ENST00000379826 B5MCH6 92 aa8.55□□□□□ -1.04
SMAD9-202ENST00000379826 IFITM1P13164 125 aa8.55□□□□□ -1.04
SMAD9-202ENST00000379826 PIEZO2Q9H5I5 2752 aa8.54□□□□□ -1.04
SMAD9-202ENST00000379826 A0A0J9YY99 117 aa8.54□□□□□ -1.04
SMAD9-202ENST00000379826 RNASE3P12724 160 aaKnown RBP8.54□□□□□ -1.04
SMAD9-202ENST00000379826 PIFOQ8TCI5 191 aa8.54□□□□□ -1.04
SMAD9-202ENST00000379826 TIMM17AQ99595 171 aa8.54□□□□□ -1.04
SMAD9-202ENST00000379826 CACNA1AO00555 2505 aa8.54□□□□□ -1.04
SMAD9-202ENST00000379826 PRIMA1Q86XR5 153 aa8.54□□□□□ -1.04
SMAD9-202ENST00000379826 H3BUA1 57 aa8.54□□□□□ -1.04
SMAD9-202ENST00000379826 LINC00158P58513 81 aa8.54□□□□□ -1.04
SMAD9-202ENST00000379826 LMO4P61968 165 aa8.54□□□□□ -1.04
SMAD9-202ENST00000379826 APRG1Q8IVJ8 170 aa8.54□□□□□ -1.04
SMAD9-202ENST00000379826 ATP6V0E2Q8NHE4 81 aa8.54□□□□□ -1.04
SMAD9-202ENST00000379826 ZNRF2Q8NHG8 242 aa8.54□□□□□ -1.04
SMAD9-202ENST00000379826 ICOSQ9Y6W8 199 aa8.54□□□□□ -1.04
SMAD9-202ENST00000379826 TRGV4A0A0C4DH28 118 aa8.54□□□□□ -1.04
SMAD9-202ENST00000379826 CRLF1O75462 422 aa8.54□□□□□ -1.04
SMAD9-202ENST00000379826 MED14OSP0DP75 135 aa8.54□□□□□ -1.04
SMAD9-202ENST00000379826 DNAJC9-AS1A6NH13 148 aa8.53□□□□□ -1.04
SMAD9-202ENST00000379826 RNF183Q96D59 192 aa8.53□□□□□ -1.04
SMAD9-202ENST00000379826 CCL24O00175 119 aa8.53□□□□□ -1.04
SMAD9-202ENST00000379826 INSP01308 110 aa8.53□□□□□ -1.04
SMAD9-202ENST00000379826 GAGE12JA6NER3 117 aa8.53□□□□□ -1.04
SMAD9-202ENST00000379826 HOXD3P31249 432 aaPredicted RBP8.53□□□□□ -1.04
SMAD9-202ENST00000379826 SLURP1P55000 103 aa8.53□□□□□ -1.04
SMAD9-202ENST00000379826 GAGE4Q13068 117 aa8.53□□□□□ -1.04
SMAD9-202ENST00000379826 GAGE5Q13069 117 aa8.53□□□□□ -1.04
SMAD9-202ENST00000379826 FBXL19-AS1Q494R0 122 aa8.53□□□□□ -1.04
SMAD9-202ENST00000379826 GAGE2AQ6NT46 116 aa8.53□□□□□ -1.04
SMAD9-202ENST00000379826 IGHV4-31P0DP07 118 aa8.52□□□□□ -1.04
SMAD9-202ENST00000379826 CFAP126Q5VTH2 177 aa8.52□□□□□ -1.04
SMAD9-202ENST00000379826 MORN3Q6PF18 240 aaPredicted RBP8.52□□□□□ -1.04
SMAD9-202ENST00000379826 SPATA25Q9BR10 227 aa8.52□□□□□ -1.04
SMAD9-202ENST00000379826 LINC01620Q4KN68 170 aa8.52□□□□□ -1.05
SMAD9-202ENST00000379826 C10orf99Q6UWK7 81 aa8.52□□□□□ -1.05
SMAD9-202ENST00000379826 NFE4Q86UQ8 179 aa8.52□□□□□ -1.05
SMAD9-202ENST00000379826 IGHV3-30P01768 117 aa8.52□□□□□ -1.05
SMAD9-202ENST00000379826 IGHV3-30-5P0DP03 117 aa8.52□□□□□ -1.05
SMAD9-202ENST00000379826 DAD1P61803 113 aa8.52□□□□□ -1.05
SMAD9-202ENST00000379826 PSMG3-AS1Q96PY0 264 aa8.52□□□□□ -1.05
SMAD9-202ENST00000379826 IGHV4OR15-8A0A075B7B6 117 aa8.51□□□□□ -1.05
SMAD9-202ENST00000379826 A0A087WW49 117 aa8.51□□□□□ -1.05
SMAD9-202ENST00000379826 PROK1P58294 105 aa8.51□□□□□ -1.05
SMAD9-202ENST00000379826 COX8CQ7Z4L0 72 aa8.51□□□□□ -1.05
SMAD9-202ENST00000379826 HIST2H2BDQ6DRA6 164 aa8.51□□□□□ -1.05
SMAD9-202ENST00000379826 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP8.51□□□□□ -1.05
SMAD9-202ENST00000379826 IGHG2P01859 326 aa8.51□□□□□ -1.05
SMAD9-202ENST00000379826 TEX49A0A1B0GTD5 131 aa8.51□□□□□ -1.05
SMAD9-202ENST00000379826 A8MZ25 164 aa8.51□□□□□ -1.05
SMAD9-202ENST00000379826 F5H768 121 aa8.5□□□□□ -1.05
SMAD9-202ENST00000379826 IGHV3-30-3P0DP02 117 aa8.5□□□□□ -1.05
SMAD9-202ENST00000379826 SLC25A29Q8N8R3 303 aa8.5□□□□□ -1.05
SMAD9-202ENST00000379826 IGHV4-4A0A075B6R2 117 aa8.5□□□□□ -1.05
SMAD9-202ENST00000379826 TMEM223A0PJW6 202 aa8.5□□□□□ -1.05
SMAD9-202ENST00000379826 RPL36AP83881 106 aaKnown RBP8.5□□□□□ -1.05
SMAD9-202ENST00000379826 RPL36ALQ969Q0 106 aaKnown RBP8.5□□□□□ -1.05
SMAD9-202ENST00000379826 Q9H8V8 135 aa8.5□□□□□ -1.05
SMAD9-202ENST00000379826 TSPEAR-AS2P59090 65 aa8.5□□□□□ -1.05
SMAD9-202ENST00000379826 C20orf203Q8NBC4 194 aa8.5□□□□□ -1.05
SMAD9-202ENST00000379826 PRM2P04554 102 aa8.5□□□□□ -1.05
SMAD9-202ENST00000379826 CHCHD5Q9BSY4 110 aa8.5□□□□□ -1.05
SMAD9-202ENST00000379826 A0A0J9YXY3 114 aa8.49□□□□□ -1.05
SMAD9-202ENST00000379826 IGLV4-69A0A075B6H9 119 aa8.49□□□□□ -1.05
SMAD9-202ENST00000379826 PRSS47A8MTI9 375 aa8.49□□□□□ -1.05
SMAD9-202ENST00000379826 XGP55808 180 aa8.49□□□□□ -1.05
SMAD9-202ENST00000379826 A6NDX4 124 aa8.49□□□□□ -1.05
SMAD9-202ENST00000379826 A0A0J9YX75 114 aa8.48□□□□□ -1.05
SMAD9-202ENST00000379826 GPHB5Q86YW7 130 aa8.48□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms