RNA–Protein interactions for RNA: ENST00000377656.6

CNTNAP3-204, Transcript of contactin associated protein like 3, humanhuman

TSL 1 (best) BASIC

Gene CNTNAP3, Length 4,986 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3-204ENST00000377656 WDR87Q6ZQQ6 2873 aa13.6□□□□□ -0.23
CNTNAP3-204ENST00000377656 A4D1N5 150 aa13.6□□□□□ -0.23
CNTNAP3-204ENST00000377656 ODF3BA8MYP8 253 aa13.6□□□□□ -0.23
CNTNAP3-204ENST00000377656 RPL18AQ02543 176 aaKnown RBP13.6□□□□□ -0.23
CNTNAP3-204ENST00000377656 ANKRD29Q8N6D5 301 aa13.6□□□□□ -0.23
CNTNAP3-204ENST00000377656 TLN1Q9Y490 2541 aaKnown RBP13.59□□□□□ -0.23
CNTNAP3-204ENST00000377656 MUSTN1Q8IVN3 82 aa13.59□□□□□ -0.23
CNTNAP3-204ENST00000377656 COX7B2Q8TF08 81 aa13.59□□□□□ -0.23
CNTNAP3-204ENST00000377656 hADV29S1A0JD25 119 aa13.59□□□□□ -0.23
CNTNAP3-204ENST00000377656 H0YGX0 51 aa13.59□□□□□ -0.23
CNTNAP3-204ENST00000377656 INSL3P51460 131 aa13.59□□□□□ -0.23
CNTNAP3-204ENST00000377656 TDRG1Q3Y452 100 aa13.59□□□□□ -0.23
CNTNAP3-204ENST00000377656 DEFB105AQ8NG35 78 aa13.59□□□□□ -0.23
CNTNAP3-204ENST00000377656 C19orf71A6NCJ1 209 aa13.58□□□□□ -0.24
CNTNAP3-204ENST00000377656 MDFICQ9P1T7 246 aa13.58□□□□□ -0.24
CNTNAP3-204ENST00000377656 DENND4AQ7Z401 1863 aa13.58□□□□□ -0.24
CNTNAP3-204ENST00000377656 ZNF295-AS1Q8N0V1 137 aa13.58□□□□□ -0.24
CNTNAP3-204ENST00000377656 IGLL5B9A064 214 aa13.58□□□□□ -0.24
CNTNAP3-204ENST00000377656 CRYBA4P53673 196 aa13.58□□□□□ -0.24
CNTNAP3-204ENST00000377656 CCDC140Q96MF4 163 aa13.58□□□□□ -0.24
CNTNAP3-204ENST00000377656 TOMM6Q96B49 74 aa13.57□□□□□ -0.24
CNTNAP3-204ENST00000377656 SMAD5-AS1Q9Y6J3 95 aa13.57□□□□□ -0.24
CNTNAP3-204ENST00000377656 BRWD1-AS2P59051 145 aa13.57□□□□□ -0.24
CNTNAP3-204ENST00000377656 C22orf34Q6ZV56 151 aa13.57□□□□□ -0.24
CNTNAP3-204ENST00000377656 DNAJC9-AS1A6NH13 148 aa13.57□□□□□ -0.24
CNTNAP3-204ENST00000377656 BAALCQ8WXS3 180 aa13.57□□□□□ -0.24
CNTNAP3-204ENST00000377656 PRO3102Q9H379 93 aa13.57□□□□□ -0.24
CNTNAP3-204ENST00000377656 C19orf84I3L1E1 186 aa13.56□□□□□ -0.24
CNTNAP3-204ENST00000377656 PRORYQ9H606 182 aa13.56□□□□□ -0.24
CNTNAP3-204ENST00000377656 DEFB4AO15263 64 aa13.56□□□□□ -0.24
CNTNAP3-204ENST00000377656 TMEM263Q8WUH6 116 aaKnown RBP13.56□□□□□ -0.24
CNTNAP3-204ENST00000377656 PCNX3Q9H6A9 2034 aa13.56□□□□□ -0.24
CNTNAP3-204ENST00000377656 LINC01548A6NM66 108 aa13.56□□□□□ -0.24
CNTNAP3-204ENST00000377656 IGHV4-4A0A075B6R2 117 aa13.55□□□□□ -0.24
CNTNAP3-204ENST00000377656 C15orf53Q8NAA6 179 aa13.55□□□□□ -0.24
CNTNAP3-204ENST00000377656 TTTY13Q9BZ97 58 aa13.55□□□□□ -0.24
CNTNAP3-204ENST00000377656 FRMD6-AS1P0C7T7 363 aa13.55□□□□□ -0.24
CNTNAP3-204ENST00000377656 VSIG2Q96IQ7 327 aa13.55□□□□□ -0.24
CNTNAP3-204ENST00000377656 DSCAMO60469 2012 aa13.55□□□□□ -0.24
CNTNAP3-204ENST00000377656 OPRPNQ99935 248 aaPredicted RBP13.55□□□□□ -0.24
CNTNAP3-204ENST00000377656 NDUFA1O15239 70 aa13.55□□□□□ -0.24
CNTNAP3-204ENST00000377656 E9PLD3 99 aa13.54□□□□□ -0.24
CNTNAP3-204ENST00000377656 C20orf203Q8NBC4 194 aa13.54□□□□□ -0.24
CNTNAP3-204ENST00000377656 MAP6D1Q9H9H5 199 aa13.54□□□□□ -0.24
CNTNAP3-204ENST00000377656 PRO0255Q9UI72 69 aa13.54□□□□□ -0.24
CNTNAP3-204ENST00000377656 F8W735 103 aaPredicted RBP13.54□□□□□ -0.24
CNTNAP3-204ENST00000377656 FSTL3O95633 263 aa13.54□□□□□ -0.24
CNTNAP3-204ENST00000377656 LRRC75A-AS1Q8N1F1 130 aa13.54□□□□□ -0.24
CNTNAP3-204ENST00000377656 TRBV10-1A0A0K0K1A3 114 aa13.53□□□□□ -0.24
CNTNAP3-204ENST00000377656 IGF1P05019 195 aa13.53□□□□□ -0.24
CNTNAP3-204ENST00000377656 EP400Q96L91 3159 aa13.53□□□□□ -0.24
CNTNAP3-204ENST00000377656 FUSP35637 526 aaKnown RBP eCLIP13.53□□□□□ -0.24
CNTNAP3-204ENST00000377656 HIGD1BQ9P298 99 aa13.53□□□□□ -0.24
CNTNAP3-204ENST00000377656 DSCAML1Q8TD84 2053 aa13.53□□□□□ -0.24
CNTNAP3-204ENST00000377656 C11orf86A6NJI1 115 aa13.53□□□□□ -0.24
CNTNAP3-204ENST00000377656 TIRAPP58753 221 aa13.53□□□□□ -0.24
CNTNAP3-204ENST00000377656 TNRC6AQ8NDV7 1962 aaKnown RBP13.53□□□□□ -0.24
CNTNAP3-204ENST00000377656 KLK12Q9UKR0 248 aa13.52□□□□□ -0.24
CNTNAP3-204ENST00000377656 MUC22E2RYF6 1773 aaPredicted RBP13.52□□□□□ -0.24
CNTNAP3-204ENST00000377656 DAND5Q8N907 189 aa13.52□□□□□ -0.25
CNTNAP3-204ENST00000377656 FXYD2P54710 66 aa13.52□□□□□ -0.25
CNTNAP3-204ENST00000377656 RS1O15537 224 aa13.51□□□□□ -0.25
CNTNAP3-204ENST00000377656 CXCL5P42830 114 aa13.51□□□□□ -0.25
CNTNAP3-204ENST00000377656 ODF1Q14990 250 aa13.51□□□□□ -0.25
CNTNAP3-204ENST00000377656 ZNF80P51504 273 aaPredicted RBP13.51□□□□□ -0.25
CNTNAP3-204ENST00000377656 SPAG11BQ08648 103 aa13.51□□□□□ -0.25
CNTNAP3-204ENST00000377656 ACYP1P07311 99 aa13.5□□□□□ -0.25
CNTNAP3-204ENST00000377656 YPEL4Q96NS1 127 aa13.5□□□□□ -0.25
CNTNAP3-204ENST00000377656 CITED1Q99966 193 aa13.5□□□□□ -0.25
CNTNAP3-204ENST00000377656 TM2D2Q9BX73 214 aa13.49□□□□□ -0.25
CNTNAP3-204ENST00000377656 C1orf229Q6ZS94 237 aaPredicted RBP13.49□□□□□ -0.25
CNTNAP3-204ENST00000377656 TRACP01848 142 aa13.48□□□□□ -0.25
CNTNAP3-204ENST00000377656 EIF4EBP1Q13541 118 aaPredicted RBP13.48□□□□□ -0.25
CNTNAP3-204ENST00000377656 Q6YL49 198 aa13.48□□□□□ -0.25
CNTNAP3-204ENST00000377656 LINC01620Q4KN68 170 aa13.48□□□□□ -0.25
CNTNAP3-204ENST00000377656 A0A1B0GXF2 115 aa13.47□□□□□ -0.25
CNTNAP3-204ENST00000377656 IGHV4-31P0DP07 118 aa13.47□□□□□ -0.25
CNTNAP3-204ENST00000377656 LINC00322Q6ZN03 302 aaPredicted RBP13.47□□□□□ -0.25
CNTNAP3-204ENST00000377656 IGHV1-58A0A0C4DH39 117 aa13.47□□□□□ -0.25
CNTNAP3-204ENST00000377656 IGLV2-8P01709 118 aa13.47□□□□□ -0.25
CNTNAP3-204ENST00000377656 K7EQG2 157 aa13.47□□□□□ -0.25
CNTNAP3-204ENST00000377656 WFDC11Q8NEX6 87 aa13.47□□□□□ -0.25
CNTNAP3-204ENST00000377656 C10orf142B7Z368 130 aa13.46□□□□□ -0.25
CNTNAP3-204ENST00000377656 EBI3Q14213 229 aa13.46□□□□□ -0.25
CNTNAP3-204ENST00000377656 ODF3Q96PU9 254 aa13.46□□□□□ -0.25
CNTNAP3-204ENST00000377656 LGALS9O00182 355 aa13.46□□□□□ -0.25
CNTNAP3-204ENST00000377656 JMJD1CQ15652 2540 aa13.45□□□□□ -0.26
CNTNAP3-204ENST00000377656 MLST8Q9BVC4 326 aa13.45□□□□□ -0.26
CNTNAP3-204ENST00000377656 NDUFS5O43920 106 aa13.45□□□□□ -0.26
CNTNAP3-204ENST00000377656 MIR7-3HGQ8N6C7 128 aa13.45□□□□□ -0.26
CNTNAP3-204ENST00000377656 NDUFA11Q86Y39 141 aa13.44□□□□□ -0.26
CNTNAP3-204ENST00000377656 TEN1Q86WV5 123 aa13.44□□□□□ -0.26
CNTNAP3-204ENST00000377656 CRYGBP07316 175 aa13.44□□□□□ -0.26
CNTNAP3-204ENST00000377656 PLA2G5P39877 138 aa13.44□□□□□ -0.26
CNTNAP3-204ENST00000377656 Q6ZTI0 123 aa13.44□□□□□ -0.26
CNTNAP3-204ENST00000377656 IGLC6P0CF74 106 aa13.43□□□□□ -0.26
CNTNAP3-204ENST00000377656 DEFB114Q30KQ6 69 aa13.43□□□□□ -0.26
CNTNAP3-204ENST00000377656 KLK5Q9Y337 293 aaPredicted RBP13.43□□□□□ -0.26
CNTNAP3-204ENST00000377656 CEMP1Q6PRD7 247 aaPredicted RBP13.43□□□□□ -0.26
CNTNAP3-204ENST00000377656 LECT2O14960 151 aa13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 69.6 ms