RNA–Protein interactions for RNA: ENST00000377349.6

CBWD3-204, Transcript of COBW domain containing 3, humanhuman

TSL 2

Gene CBWD3, Length 1,403 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-204ENST00000377349 UBE2D2P62837 147 aa12.66□□□□□ -0.38
CBWD3-204ENST00000377349 BAALCQ8WXS3 180 aa12.66□□□□□ -0.38
CBWD3-204ENST00000377349 RMI2Q96E14 147 aa12.66□□□□□ -0.38
CBWD3-204ENST00000377349 PKHD1L1Q86WI1 4243 aa12.65□□□□□ -0.38
CBWD3-204ENST00000377349 RBFOX3A6NFN3 312 aa12.65□□□□□ -0.38
CBWD3-204ENST00000377349 SNAI2O43623 268 aa12.65□□□□□ -0.38
CBWD3-204ENST00000377349 CXCL1P09341 107 aa12.65□□□□□ -0.38
CBWD3-204ENST00000377349 SREK1IP1Q8N9Q2 155 aaPredicted RBP12.65□□□□□ -0.38
CBWD3-204ENST00000377349 OR2D3Q8NGH3 330 aa12.65□□□□□ -0.38
CBWD3-204ENST00000377349 C11orf52Q96A22 123 aa12.65□□□□□ -0.38
CBWD3-204ENST00000377349 AP1S3Q96PC3 154 aa12.65□□□□□ -0.38
CBWD3-204ENST00000377349 hCG_2014768A0A024R1R8 64 aa12.64□□□□□ -0.39
CBWD3-204ENST00000377349 OR5AL1P0C617 328 aa12.64□□□□□ -0.39
CBWD3-204ENST00000377349 SULT1A2P50226 295 aa12.64□□□□□ -0.39
CBWD3-204ENST00000377349 TCTE3Q8IZS6 198 aa12.64□□□□□ -0.39
CBWD3-204ENST00000377349 NEXN-AS1Q8NBZ9 246 aa12.64□□□□□ -0.39
CBWD3-204ENST00000377349 MED9Q9NWA0 146 aa12.64□□□□□ -0.39
CBWD3-204ENST00000377349 TRAV1-1A0A0B4J248 108 aa12.63□□□□□ -0.39
CBWD3-204ENST00000377349 MEF2BQ02080 365 aaPredicted RBP12.63□□□□□ -0.39
CBWD3-204ENST00000377349 FER1L6-AS1Q8NA97 138 aa12.63□□□□□ -0.39
CBWD3-204ENST00000377349 CHCHD5Q9BSY4 110 aa12.63□□□□□ -0.39
CBWD3-204ENST00000377349 SSBP4Q9BWG4 385 aaPredicted RBP12.62□□□□□ -0.39
CBWD3-204ENST00000377349 COX11Q9Y6N1 276 aa12.62□□□□□ -0.39
CBWD3-204ENST00000377349 PDE6DO43924 150 aa12.62□□□□□ -0.39
CBWD3-204ENST00000377349 CRPP02741 224 aa12.62□□□□□ -0.39
CBWD3-204ENST00000377349 ELOBQ15370 118 aa12.62□□□□□ -0.39
CBWD3-204ENST00000377349 SLC51BQ86UW2 128 aa12.62□□□□□ -0.39
CBWD3-204ENST00000377349 C15orf54Q8N8G6 183 aa12.62□□□□□ -0.39
CBWD3-204ENST00000377349 OR10G8Q8NGN5 311 aa12.62□□□□□ -0.39
CBWD3-204ENST00000377349 TRBV6-8A0A0A6YYG3 113 aa12.61□□□□□ -0.39
CBWD3-204ENST00000377349 P01737 135 aa12.61□□□□□ -0.39
CBWD3-204ENST00000377349 BCL2P10415 239 aa12.61□□□□□ -0.39
CBWD3-204ENST00000377349 RPS20P60866 119 aaKnown RBP12.61□□□□□ -0.39
CBWD3-204ENST00000377349 LINC00528Q8N1L1 170 aa12.61□□□□□ -0.39
CBWD3-204ENST00000377349 J3QL48 77 aa12.6□□□□□ -0.39
CBWD3-204ENST00000377349 IGLV2-8P01709 118 aa12.6□□□□□ -0.39
CBWD3-204ENST00000377349 KRTAP29-1A8MX34 341 aaPredicted RBP12.59□□□□□ -0.39
CBWD3-204ENST00000377349 ANGP03950 147 aaKnown RBP12.59□□□□□ -0.39
CBWD3-204ENST00000377349 LINC01620Q4KN68 170 aa12.59□□□□□ -0.39
CBWD3-204ENST00000377349 MPV17L2Q567V2 206 aa12.59□□□□□ -0.39
CBWD3-204ENST00000377349 CHCHD7Q9BUK0 85 aa12.59□□□□□ -0.39
CBWD3-204ENST00000377349 UBR4Q5T4S7 5183 aa12.58□□□□□ -0.4
CBWD3-204ENST00000377349 XKRY2A2RUG3 117 aa12.58□□□□□ -0.4
CBWD3-204ENST00000377349 AKAP14Q86UN6 197 aa12.58□□□□□ -0.4
CBWD3-204ENST00000377349 VAX2Q9UIW0 290 aa12.58□□□□□ -0.4
CBWD3-204ENST00000377349 PLA2G1BP04054 148 aaKnown RBP12.57□□□□□ -0.4
CBWD3-204ENST00000377349 KRTAP10-4P60372 401 aaPredicted RBP12.57□□□□□ -0.4
CBWD3-204ENST00000377349 GAGE6Q13070 117 aa12.57□□□□□ -0.4
CBWD3-204ENST00000377349 CLPSL2Q6UWE3 100 aa12.57□□□□□ -0.4
CBWD3-204ENST00000377349 Q8N976 141 aa12.57□□□□□ -0.4
CBWD3-204ENST00000377349 C1orf43Q9BWL3 253 aa12.57□□□□□ -0.4
CBWD3-204ENST00000377349 TRBV20OR9-2A0A075B6H5 130 aa12.56□□□□□ -0.4
CBWD3-204ENST00000377349 C19orf71A6NCJ1 209 aa12.56□□□□□ -0.4
CBWD3-204ENST00000377349 HLA-DQA1P01909 254 aa12.56□□□□□ -0.4
CBWD3-204ENST00000377349 IGLC6P0CF74 106 aa12.56□□□□□ -0.4
CBWD3-204ENST00000377349 CACNG7P62955 275 aa12.56□□□□□ -0.4
CBWD3-204ENST00000377349 Q0VG73 95 aa12.56□□□□□ -0.4
CBWD3-204ENST00000377349 KIF25-AS1Q9Y6Z4 181 aa12.56□□□□□ -0.4
CBWD3-204ENST00000377349 SUMO4Q6EEV6 95 aa12.55□□□□□ -0.4
CBWD3-204ENST00000377349 LYZL1Q6UWQ5 148 aa12.55□□□□□ -0.4
CBWD3-204ENST00000377349 SCXQ7RTU7 201 aa12.55□□□□□ -0.4
CBWD3-204ENST00000377349 BIN3Q9NQY0 253 aa12.55□□□□□ -0.4
CBWD3-204ENST00000377349 H7C1H1 209 aa12.54□□□□□ -0.4
CBWD3-204ENST00000377349 CEBPGP53567 150 aa12.54□□□□□ -0.4
CBWD3-204ENST00000377349 ALKAL2Q6UX46 152 aa12.54□□□□□ -0.4
CBWD3-204ENST00000377349 Q6ZNX1 250 aa12.54□□□□□ -0.4
CBWD3-204ENST00000377349 DEFB104AQ8WTQ1 72 aa12.54□□□□□ -0.4
CBWD3-204ENST00000377349 SMIM12Q96EX1 92 aa12.54□□□□□ -0.4
CBWD3-204ENST00000377349 TRBV25-1A0A075B6N4 114 aa12.54□□□□□ -0.4
CBWD3-204ENST00000377349 NKX2-5P52952 324 aaPredicted RBP12.54□□□□□ -0.4
CBWD3-204ENST00000377349 TMEM97Q5BJF2 176 aa12.54□□□□□ -0.4
CBWD3-204ENST00000377349 NTM-AS1Q6ZSK4 140 aa12.54□□□□□ -0.4
CBWD3-204ENST00000377349 C9orf62Q8N4C0 152 aa12.54□□□□□ -0.4
CBWD3-204ENST00000377349 TRGC1P0CF51 173 aa12.53□□□□□ -0.4
CBWD3-204ENST00000377349 PKIAP61925 76 aa12.53□□□□□ -0.4
CBWD3-204ENST00000377349 ATRAIDQ6UW56 229 aa12.53□□□□□ -0.4
CBWD3-204ENST00000377349 ENHOQ6UWT2 76 aa12.53□□□□□ -0.4
CBWD3-204ENST00000377349 NUDT10Q8NFP7 164 aa12.53□□□□□ -0.4
CBWD3-204ENST00000377349 NUDT11Q96G61 164 aa12.53□□□□□ -0.4
CBWD3-204ENST00000377349 RNASE7Q9H1E1 156 aaKnown RBP12.53□□□□□ -0.4
CBWD3-204ENST00000377349 F2Z2F3 143 aa12.52□□□□□ -0.41
CBWD3-204ENST00000377349 M0QY20 66 aa12.52□□□□□ -0.41
CBWD3-204ENST00000377349 TWIST1Q15672 202 aa12.52□□□□□ -0.41
CBWD3-204ENST00000377349 IGHV1-24A0A0C4DH33 117 aa12.51□□□□□ -0.41
CBWD3-204ENST00000377349 NTF3P20783 257 aa12.51□□□□□ -0.41
CBWD3-204ENST00000377349 TAGLN2P37802 199 aaKnown RBP12.51□□□□□ -0.41
CBWD3-204ENST00000377349 RPP21Q9H633 154 aaKnown RBP12.51□□□□□ -0.41
CBWD3-204ENST00000377349 RBX1P62877 108 aa12.5□□□□□ -0.41
CBWD3-204ENST00000377349 RASL11AQ6T310 242 aa12.5□□□□□ -0.41
CBWD3-204ENST00000377349 LINC00269Q8N2A0 174 aa12.5□□□□□ -0.41
CBWD3-204ENST00000377349 DPH3P1Q9H4G8 78 aa12.5□□□□□ -0.41
CBWD3-204ENST00000377349 K7EN84 100 aa12.49□□□□□ -0.41
CBWD3-204ENST00000377349 CHAC1Q9BUX1 264 aa12.49□□□□□ -0.41
CBWD3-204ENST00000377349 BLOC1S1P78537 153 aa12.48□□□□□ -0.41
CBWD3-204ENST00000377349 C14orf177Q52M58 125 aa12.48□□□□□ -0.41
CBWD3-204ENST00000377349 OCC1Q8TAD7 63 aa12.48□□□□□ -0.41
CBWD3-204ENST00000377349 IGLV10-54A0A075B6I4 117 aa12.47□□□□□ -0.41
CBWD3-204ENST00000377349 CTRLP40313 264 aa12.47□□□□□ -0.41
CBWD3-204ENST00000377349 MIAQ16674 131 aa12.47□□□□□ -0.41
CBWD3-204ENST00000377349 TRAV26-2A0A0B4J265 109 aa12.46□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms