RNA–Protein interactions for RNA: ENST00000376636.7

VPS13A-205, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13A, Length 11,145 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-205ENST00000376636 MED14OSP0DP75 135 aa9.06□□□□□ -0.96
VPS13A-205ENST00000376636 LOXP28300 417 aaPredicted RBP9.06□□□□□ -0.96
VPS13A-205ENST00000376636 B3GALT5-AS1P59052 145 aa9.06□□□□□ -0.96
VPS13A-205ENST00000376636 BLCAPP62952 87 aa9.06□□□□□ -0.96
VPS13A-205ENST00000376636 IMUPQ9GZP8 106 aa9.06□□□□□ -0.96
VPS13A-205ENST00000376636 IGLV2-23P01705 113 aa9.06□□□□□ -0.96
VPS13A-205ENST00000376636 TPSG1Q9NRR2 321 aa9.06□□□□□ -0.96
VPS13A-205ENST00000376636 TCL1BO95988 128 aa9.05□□□□□ -0.96
VPS13A-205ENST00000376636 Q6ZS92 163 aa9.05□□□□□ -0.96
VPS13A-205ENST00000376636 Q0VFX4 171 aa9.05□□□□□ -0.96
VPS13A-205ENST00000376636 C15orf65H3BRN8 121 aa9.05□□□□□ -0.96
VPS13A-205ENST00000376636 GP9P14770 177 aa9.05□□□□□ -0.96
VPS13A-205ENST00000376636 FAM19A3Q7Z5A8 133 aa9.05□□□□□ -0.96
VPS13A-205ENST00000376636 KAAG1Q9UBP8 84 aa9.05□□□□□ -0.96
VPS13A-205ENST00000376636 PIK3CD-AS1Q5SR53 167 aa9.05□□□□□ -0.96
VPS13A-205ENST00000376636 RPL39P62891 51 aaKnown RBP9.04□□□□□ -0.96
VPS13A-205ENST00000376636 LYPD6Q86Y78 171 aa9.04□□□□□ -0.96
VPS13A-205ENST00000376636 HIVEP2P31629 2446 aa9.04□□□□□ -0.96
VPS13A-205ENST00000376636 ENHOQ6UWT2 76 aa9.04□□□□□ -0.96
VPS13A-205ENST00000376636 IGLC6P0CF74 106 aa9.04□□□□□ -0.96
VPS13A-205ENST00000376636 NPBQ8NG41 125 aa9.04□□□□□ -0.96
VPS13A-205ENST00000376636 TIMM17BO60830 172 aa9.04□□□□□ -0.96
VPS13A-205ENST00000376636 CTRLP40313 264 aa9.03□□□□□ -0.96
VPS13A-205ENST00000376636 ODF1Q14990 250 aa9.03□□□□□ -0.96
VPS13A-205ENST00000376636 IGLV3-9A0A075B6K5 115 aa9.03□□□□□ -0.96
VPS13A-205ENST00000376636 SP5Q6BEB4 398 aaPredicted RBP9.03□□□□□ -0.96
VPS13A-205ENST00000376636 IL17DQ8TAD2 202 aa9.03□□□□□ -0.96
VPS13A-205ENST00000376636 CCDC168Q8NDH2 2452 aa9.03□□□□□ -0.96
VPS13A-205ENST00000376636 TMEM263Q8WUH6 116 aaKnown RBP9.03□□□□□ -0.96
VPS13A-205ENST00000376636 Q8N9L7 120 aa9.03□□□□□ -0.96
VPS13A-205ENST00000376636 MDFICQ9P1T7 246 aa9.03□□□□□ -0.96
VPS13A-205ENST00000376636 MRPS36P82909 103 aaKnown RBP9.03□□□□□ -0.96
VPS13A-205ENST00000376636 RETNQ9HD89 108 aa9.03□□□□□ -0.96
VPS13A-205ENST00000376636 UFSP1Q6NVU6 142 aa9.02□□□□□ -0.96
VPS13A-205ENST00000376636 IGHV4-59P01825 116 aa9.02□□□□□ -0.97
VPS13A-205ENST00000376636 ARTNQ5T4W7 220 aa9.02□□□□□ -0.97
VPS13A-205ENST00000376636 RNF144BQ7Z419 303 aa9.02□□□□□ -0.97
VPS13A-205ENST00000376636 TMEM105Q8N8V8 129 aa9.02□□□□□ -0.97
VPS13A-205ENST00000376636 PTPRBP23467 1997 aa9.02□□□□□ -0.97
VPS13A-205ENST00000376636 APRG1Q8IVJ8 170 aa9.02□□□□□ -0.97
VPS13A-205ENST00000376636 GATA1P15976 413 aaPredicted RBP9.02□□□□□ -0.97
VPS13A-205ENST00000376636 MAPK1IP1LQ8NDC0 245 aa9.01□□□□□ -0.97
VPS13A-205ENST00000376636 SERP2Q8N6R1 65 aa9.01□□□□□ -0.97
VPS13A-205ENST00000376636 GPHB5Q86YW7 130 aa9.01□□□□□ -0.97
VPS13A-205ENST00000376636 ANKHD1Q8IWZ3 2542 aaKnown RBP9.01□□□□□ -0.97
VPS13A-205ENST00000376636 CRIPAKQ8N1N5 446 aa9.01□□□□□ -0.97
VPS13A-205ENST00000376636 H7C423 109 aa9.01□□□□□ -0.97
VPS13A-205ENST00000376636 ABCA2Q9BZC7 2435 aa9□□□□□ -0.97
VPS13A-205ENST00000376636 NOTCH4Q99466 2003 aa9□□□□□ -0.97
VPS13A-205ENST00000376636 KLK12Q9UKR0 248 aa9□□□□□ -0.97
VPS13A-205ENST00000376636 TDRG1Q3Y452 100 aa9□□□□□ -0.97
VPS13A-205ENST00000376636 TRBV10-1A0A0K0K1A3 114 aa8.99□□□□□ -0.97
VPS13A-205ENST00000376636 DEFB136Q30KP8 78 aa8.99□□□□□ -0.97
VPS13A-205ENST00000376636 RNF138Q8WVD3 245 aa8.99□□□□□ -0.97
VPS13A-205ENST00000376636 PTH2Q96A98 100 aa8.99□□□□□ -0.97
VPS13A-205ENST00000376636 C9orf85Q96MD7 179 aa8.99□□□□□ -0.97
VPS13A-205ENST00000376636 MT-ATP8P03928 68 aa8.99□□□□□ -0.97
VPS13A-205ENST00000376636 PMAIP1Q13794 54 aa8.99□□□□□ -0.97
VPS13A-205ENST00000376636 CUL9Q8IWT3 2517 aa8.98□□□□□ -0.97
VPS13A-205ENST00000376636 SLURP1P55000 103 aa8.98□□□□□ -0.97
VPS13A-205ENST00000376636 CDPF1Q6NVV7 123 aa8.98□□□□□ -0.97
VPS13A-205ENST00000376636 SPRY4Q9C004 299 aa8.98□□□□□ -0.97
VPS13A-205ENST00000376636 IGFL3Q6UXB1 125 aa8.97□□□□□ -0.97
VPS13A-205ENST00000376636 HIGD2AQ9BW72 106 aa8.97□□□□□ -0.97
VPS13A-205ENST00000376636 ZNF706Q9Y5V0 76 aaPredicted RBP8.97□□□□□ -0.97
VPS13A-205ENST00000376636 NFE4Q86UQ8 179 aa8.97□□□□□ -0.97
VPS13A-205ENST00000376636 CCKP06307 115 aa8.96□□□□□ -0.97
VPS13A-205ENST00000376636 GTSF1Q8WW33 167 aa8.96□□□□□ -0.97
VPS13A-205ENST00000376636 IGLV1-44P01699 117 aa8.96□□□□□ -0.98
VPS13A-205ENST00000376636 C4orf3Q8WVX3 66 aa8.96□□□□□ -0.98
VPS13A-205ENST00000376636 P0DMU3 169 aa8.96□□□□□ -0.98
VPS13A-205ENST00000376636 FAM231AP0DMU4 169 aa8.96□□□□□ -0.98
VPS13A-205ENST00000376636 FAM231CP0DMU5 169 aa8.96□□□□□ -0.98
VPS13A-205ENST00000376636 Q6ZR03 302 aa8.96□□□□□ -0.98
VPS13A-205ENST00000376636 C17orf82Q86X59 251 aaPredicted RBP8.96□□□□□ -0.98
VPS13A-205ENST00000376636 VWCEQ96DN2 955 aa8.96□□□□□ -0.98
VPS13A-205ENST00000376636 K7ENP7 123 aa8.96□□□□□ -0.98
VPS13A-205ENST00000376636 IGLV11-55A0A075B6I3 123 aa8.95□□□□□ -0.98
VPS13A-205ENST00000376636 ZFAND2AQ8N6M9 145 aa8.95□□□□□ -0.98
VPS13A-205ENST00000376636 PRO0255Q9UI72 69 aa8.95□□□□□ -0.98
VPS13A-205ENST00000376636 LRP4O75096 1905 aa8.95□□□□□ -0.98
VPS13A-205ENST00000376636 LINC00173Q6ZV60 143 aa8.95□□□□□ -0.98
VPS13A-205ENST00000376636 Q8N9W7 124 aa8.95□□□□□ -0.98
VPS13A-205ENST00000376636 PTPRSQ13332 1948 aa8.95□□□□□ -0.98
VPS13A-205ENST00000376636 J3QKU1 62 aa8.95□□□□□ -0.98
VPS13A-205ENST00000376636 TRBV6-1A0A0K0K1D8 114 aa8.94□□□□□ -0.98
VPS13A-205ENST00000376636 INSL3P51460 131 aa8.94□□□□□ -0.98
VPS13A-205ENST00000376636 FAM222AQ5U5X8 452 aa8.94□□□□□ -0.98
VPS13A-205ENST00000376636 SPATA12Q7Z6I5 190 aa8.94□□□□□ -0.98
VPS13A-205ENST00000376636 RAI1Q7Z5J4 1906 aaPredicted RBP8.94□□□□□ -0.98
VPS13A-205ENST00000376636 I3L2K1 104 aa8.94□□□□□ -0.98
VPS13A-205ENST00000376636 FHL1Q13642 323 aa8.94□□□□□ -0.98
VPS13A-205ENST00000376636 CACNA1AO00555 2505 aa8.94□□□□□ -0.98
VPS13A-205ENST00000376636 ACACBO00763 2458 aa8.94□□□□□ -0.98
VPS13A-205ENST00000376636 LRRC75A-AS1Q8N1F1 130 aa8.93□□□□□ -0.98
VPS13A-205ENST00000376636 C1orf147Q96MC9 270 aaPredicted RBP8.93□□□□□ -0.98
VPS13A-205ENST00000376636 A0A087WZ39 114 aa8.93□□□□□ -0.98
VPS13A-205ENST00000376636 CENPVL3A0A0U1RRI6 287 aa8.93□□□□□ -0.98
VPS13A-205ENST00000376636 C2orf70A6NJV1 201 aa8.93□□□□□ -0.98
VPS13A-205ENST00000376636 IBA57-AS1B1ANH7 110 aa8.93□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 72.9 ms