RNA–Protein interactions for RNA: ENST00000376230.7

ZNF550-203, Transcript of zinc finger protein 550, humanhuman

TSL 1 (best)

Gene ZNF550, Length 3,719 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF550-203ENST00000376230 EBI3Q14213 229 aa7.59□□□□□ -1.19
ZNF550-203ENST00000376230 CLUHP3Q96NS8 147 aa7.59□□□□□ -1.19
ZNF550-203ENST00000376230 SMIM2Q9BVW6 85 aa7.59□□□□□ -1.19
ZNF550-203ENST00000376230 U3KQK5 164 aa7.59□□□□□ -1.19
ZNF550-203ENST00000376230 F8W1H4 67 aa7.58□□□□□ -1.2
ZNF550-203ENST00000376230 TRAV2A0A0B4J234 112 aa7.58□□□□□ -1.2
ZNF550-203ENST00000376230 F8VRH5 84 aa7.58□□□□□ -1.2
ZNF550-203ENST00000376230 RRN3P1Q2M238 152 aa7.58□□□□□ -1.2
ZNF550-203ENST00000376230 SMR3AQ99954 134 aa7.58□□□□□ -1.2
ZNF550-203ENST00000376230 MUC4Q99102 2169 aa7.58□□□□□ -1.2
ZNF550-203ENST00000376230 A0A096LPF7 62 aa7.58□□□□□ -1.2
ZNF550-203ENST00000376230 PLNP26678 52 aa7.58□□□□□ -1.2
ZNF550-203ENST00000376230 STHQ8IWL8 128 aa7.58□□□□□ -1.2
ZNF550-203ENST00000376230 TMEM61Q8N0U2 210 aa7.58□□□□□ -1.2
ZNF550-203ENST00000376230 SPANXB1Q9NS25 103 aaPredicted RBP7.58□□□□□ -1.2
ZNF550-203ENST00000376230 TOMM7Q9P0U1 55 aa7.58□□□□□ -1.2
ZNF550-203ENST00000376230 TRGV2A0A075B6R0 118 aa7.57□□□□□ -1.2
ZNF550-203ENST00000376230 PLEKHB2Q96CS7 222 aa7.57□□□□□ -1.2
ZNF550-203ENST00000376230 TMEM238LA0A1B0GVL6 79 aa7.57□□□□□ -1.2
ZNF550-203ENST00000376230 A6NJY4 79 aa7.57□□□□□ -1.2
ZNF550-203ENST00000376230 GATD1Q8NB37 220 aa7.57□□□□□ -1.2
ZNF550-203ENST00000376230 ATP6V0BQ99437 205 aa7.57□□□□□ -1.2
ZNF550-203ENST00000376230 C11orf68Q9H3H3 251 aaKnown RBP7.57□□□□□ -1.2
ZNF550-203ENST00000376230 VPREB3Q9UKI3 123 aa7.57□□□□□ -1.2
ZNF550-203ENST00000376230 F8P00451 2351 aa7.57□□□□□ -1.2
ZNF550-203ENST00000376230 LGALS3P17931 250 aaKnown RBP7.57□□□□□ -1.2
ZNF550-203ENST00000376230 ZFAND2AQ8N6M9 145 aa7.56□□□□□ -1.2
ZNF550-203ENST00000376230 ESM1Q9NQ30 184 aa7.56□□□□□ -1.2
ZNF550-203ENST00000376230 E9PLD3 99 aa7.56□□□□□ -1.2
ZNF550-203ENST00000376230 DEFB130BP0DP73 79 aa7.56□□□□□ -1.2
ZNF550-203ENST00000376230 DEFB130AP0DP74 79 aa7.56□□□□□ -1.2
ZNF550-203ENST00000376230 CD28P10747 220 aa7.56□□□□□ -1.2
ZNF550-203ENST00000376230 HERVK_113P61574 105 aa7.56□□□□□ -1.2
ZNF550-203ENST00000376230 LINC01559Q495D7 138 aa7.56□□□□□ -1.2
ZNF550-203ENST00000376230 DLX4Q92988 240 aaPredicted RBP7.56□□□□□ -1.2
ZNF550-203ENST00000376230 WFDC10AQ9H1F0 79 aa7.56□□□□□ -1.2
ZNF550-203ENST00000376230 VCX2Q9H322 139 aa7.56□□□□□ -1.2
ZNF550-203ENST00000376230 TRBV6-1A0A0K0K1D8 114 aa7.56□□□□□ -1.2
ZNF550-203ENST00000376230 PF4P02776 101 aa7.56□□□□□ -1.2
ZNF550-203ENST00000376230 ORMDL2Q53FV1 153 aa7.56□□□□□ -1.2
ZNF550-203ENST00000376230 GEMIN7Q9H840 131 aaKnown RBP7.56□□□□□ -1.2
ZNF550-203ENST00000376230 TRAV26-1A0A087WT03 109 aa7.55□□□□□ -1.2
ZNF550-203ENST00000376230 TRAV13-1A0A0B4J241 112 aa7.55□□□□□ -1.2
ZNF550-203ENST00000376230 IGKV2D-29A0A075B6S2 120 aaPredicted RBP7.55□□□□□ -1.2
ZNF550-203ENST00000376230 IGKV2-29A2NJV5 120 aaPredicted RBP7.55□□□□□ -1.2
ZNF550-203ENST00000376230 SUMO4Q6EEV6 95 aa7.55□□□□□ -1.2
ZNF550-203ENST00000376230 ZNF843Q8N446 348 aa7.55□□□□□ -1.2
ZNF550-203ENST00000376230 MGAM2Q2M2H8 2515 aa7.55□□□□□ -1.2
ZNF550-203ENST00000376230 IGHV1OR15-1A0A075B7D0 117 aa7.55□□□□□ -1.2
ZNF550-203ENST00000376230 DEFB113Q30KQ7 82 aa7.55□□□□□ -1.2
ZNF550-203ENST00000376230 HIGD1BQ9P298 99 aa7.55□□□□□ -1.2
ZNF550-203ENST00000376230 LGALS1P09382 135 aaKnown RBP7.54□□□□□ -1.2
ZNF550-203ENST00000376230 TM2D2Q9BX73 214 aa7.54□□□□□ -1.2
ZNF550-203ENST00000376230 DEFB4AO15263 64 aa7.54□□□□□ -1.2
ZNF550-203ENST00000376230 MT-ATP8P03928 68 aa7.54□□□□□ -1.2
ZNF550-203ENST00000376230 C9orf47Q6ZRZ4 202 aa7.54□□□□□ -1.2
ZNF550-203ENST00000376230 GAGE12JA6NER3 117 aa7.53□□□□□ -1.2
ZNF550-203ENST00000376230 C9JAW5 83 aa7.53□□□□□ -1.2
ZNF550-203ENST00000376230 TMEM262E9PQX1 116 aa7.53□□□□□ -1.2
ZNF550-203ENST00000376230 GAGE4Q13068 117 aa7.53□□□□□ -1.2
ZNF550-203ENST00000376230 GAGE5Q13069 117 aa7.53□□□□□ -1.2
ZNF550-203ENST00000376230 NRACQ8N912 160 aa7.53□□□□□ -1.2
ZNF550-203ENST00000376230 RASL10AQ92737 203 aa7.53□□□□□ -1.2
ZNF550-203ENST00000376230 BAALCQ8WXS3 180 aa7.53□□□□□ -1.2
ZNF550-203ENST00000376230 GAGE7O76087 117 aa7.53□□□□□ -1.2
ZNF550-203ENST00000376230 GAGE12FP0CL80 117 aa7.53□□□□□ -1.2
ZNF550-203ENST00000376230 GAGE12GP0CL81 117 aa7.53□□□□□ -1.2
ZNF550-203ENST00000376230 GAGE12IP0CL82 117 aa7.53□□□□□ -1.2
ZNF550-203ENST00000376230 ZNF48Q96MX3 618 aaPredicted RBP7.53□□□□□ -1.2
ZNF550-203ENST00000376230 BSNQ9UPA5 3926 aa7.53□□□□□ -1.2
ZNF550-203ENST00000376230 C11orf86A6NJI1 115 aa7.52□□□□□ -1.21
ZNF550-203ENST00000376230 A8MWV9 139 aa7.52□□□□□ -1.21
ZNF550-203ENST00000376230 VCYO14598 125 aa7.52□□□□□ -1.21
ZNF550-203ENST00000376230 IGHV4-31P0DP07 118 aa7.52□□□□□ -1.21
ZNF550-203ENST00000376230 CITED2Q99967 270 aaPredicted RBP7.52□□□□□ -1.21
ZNF550-203ENST00000376230 PEMTQ9UBM1 199 aa7.52□□□□□ -1.21
ZNF550-203ENST00000376230 A0A0J9YXV3 536 aa7.52□□□□□ -1.21
ZNF550-203ENST00000376230 LINC01619G3V211 115 aa7.52□□□□□ -1.21
ZNF550-203ENST00000376230 FOXI1Q12951 378 aa7.52□□□□□ -1.21
ZNF550-203ENST00000376230 GPHB5Q86YW7 130 aa7.52□□□□□ -1.21
ZNF550-203ENST00000376230 DAND5Q8N907 189 aa7.52□□□□□ -1.21
ZNF550-203ENST00000376230 ZNRF2Q8NHG8 242 aa7.52□□□□□ -1.21
ZNF550-203ENST00000376230 DSCR9P59020 149 aa7.51□□□□□ -1.21
ZNF550-203ENST00000376230 RNASE3P12724 160 aaKnown RBP7.51□□□□□ -1.21
ZNF550-203ENST00000376230 ANAPC13Q9BS18 74 aa7.51□□□□□ -1.21
ZNF550-203ENST00000376230 MAST4O15021 2626 aa7.51□□□□□ -1.21
ZNF550-203ENST00000376230 MXRA5Q9NR99 2828 aa7.51□□□□□ -1.21
ZNF550-203ENST00000376230 TRBV20-1A0A075B6N2 111 aa7.51□□□□□ -1.21
ZNF550-203ENST00000376230 A8MZ25 164 aa7.51□□□□□ -1.21
ZNF550-203ENST00000376230 CLPSL2Q6UWE3 100 aa7.51□□□□□ -1.21
ZNF550-203ENST00000376230 TRPT1Q86TN4 253 aaKnown RBP7.51□□□□□ -1.21
ZNF550-203ENST00000376230 TSPAN13O95857 204 aa7.5□□□□□ -1.21
ZNF550-203ENST00000376230 CRYBA4P53673 196 aa7.5□□□□□ -1.21
ZNF550-203ENST00000376230 MRAP2Q96G30 205 aa7.5□□□□□ -1.21
ZNF550-203ENST00000376230 Q9UF83 564 aa7.5□□□□□ -1.21
ZNF550-203ENST00000376230 PLA2G2AP14555 144 aa7.5□□□□□ -1.21
ZNF550-203ENST00000376230 MEIG1Q5JSS6 88 aa7.5□□□□□ -1.21
ZNF550-203ENST00000376230 ZMAT4Q9H898 229 aa7.5□□□□□ -1.21
ZNF550-203ENST00000376230 LYRM7Q5U5X0 104 aa7.5□□□□□ -1.21
ZNF550-203ENST00000376230 SETXQ7Z333 2677 aaKnown RBP7.49□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 137.5 ms