RNA–Protein interactions for RNA: ENST00000375820.8

COL4A1-201, Transcript of collagen type IV alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL4A1, Length 6,532 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A1-201ENST00000375820 KIR2DL5BA0A0G2JN68 375 aa10.47□□□□□ -0.73
COL4A1-201ENST00000375820 KIR2DL5BA0A0G2JPC4 375 aa10.47□□□□□ -0.73
COL4A1-201ENST00000375820 SEC61GP60059 68 aa10.47□□□□□ -0.73
COL4A1-201ENST00000375820 KIR2DL5AQ8N109 375 aa10.47□□□□□ -0.73
COL4A1-201ENST00000375820 LINC01548A6NM66 108 aa10.46□□□□□ -0.73
COL4A1-201ENST00000375820 SLPIP03973 132 aa10.46□□□□□ -0.73
COL4A1-201ENST00000375820 KLK5Q9Y337 293 aaPredicted RBP10.46□□□□□ -0.73
COL4A1-201ENST00000375820 LOXL1Q08397 574 aaPredicted RBP10.46□□□□□ -0.73
COL4A1-201ENST00000375820 MLST8Q9BVC4 326 aa10.46□□□□□ -0.73
COL4A1-201ENST00000375820 ATOX1O00244 68 aa10.46□□□□□ -0.74
COL4A1-201ENST00000375820 SPANXDQ9BXN6 97 aa10.46□□□□□ -0.74
COL4A1-201ENST00000375820 LYPD6Q86Y78 171 aa10.46□□□□□ -0.74
COL4A1-201ENST00000375820 TNCP24821 2201 aa10.45□□□□□ -0.74
COL4A1-201ENST00000375820 DNAJC9-AS1A6NH13 148 aa10.45□□□□□ -0.74
COL4A1-201ENST00000375820 RNASE8Q8TDE3 154 aaKnown RBP10.45□□□□□ -0.74
COL4A1-201ENST00000375820 FOXI1Q12951 378 aa10.45□□□□□ -0.74
COL4A1-201ENST00000375820 B9D2Q9BPU9 175 aa10.45□□□□□ -0.74
COL4A1-201ENST00000375820 IGLV2-33A0A075B6J2 118 aaPredicted RBP10.45□□□□□ -0.74
COL4A1-201ENST00000375820 TEN1Q86WV5 123 aa10.45□□□□□ -0.74
COL4A1-201ENST00000375820 NLRC5Q86WI3 1866 aa10.45□□□□□ -0.74
COL4A1-201ENST00000375820 GPHB5Q86YW7 130 aa10.45□□□□□ -0.74
COL4A1-201ENST00000375820 ODF3L1Q8IXM7 274 aa10.45□□□□□ -0.74
COL4A1-201ENST00000375820 PKIGQ9Y2B9 76 aa10.45□□□□□ -0.74
COL4A1-201ENST00000375820 MAP6D1Q9H9H5 199 aa10.44□□□□□ -0.74
COL4A1-201ENST00000375820 CACNA1HO95180 2353 aa10.44□□□□□ -0.74
COL4A1-201ENST00000375820 COX7BP24311 80 aa10.44□□□□□ -0.74
COL4A1-201ENST00000375820 Q6ZTI0 123 aa10.44□□□□□ -0.74
COL4A1-201ENST00000375820 C11orf45Q8TAV5 145 aa10.44□□□□□ -0.74
COL4A1-201ENST00000375820 TMEM263Q8WUH6 116 aaKnown RBP10.44□□□□□ -0.74
COL4A1-201ENST00000375820 TAX1BP3O14907 124 aa10.43□□□□□ -0.74
COL4A1-201ENST00000375820 E9PLD3 99 aa10.43□□□□□ -0.74
COL4A1-201ENST00000375820 DCANP1Q8TF63 244 aa10.43□□□□□ -0.74
COL4A1-201ENST00000375820 KIF26AQ9ULI4 1882 aaPredicted RBP10.43□□□□□ -0.74
COL4A1-201ENST00000375820 IGHV1-58A0A0C4DH39 117 aa10.43□□□□□ -0.74
COL4A1-201ENST00000375820 NDUFC2O95298 119 aa10.43□□□□□ -0.74
COL4A1-201ENST00000375820 TP73-AS1Q9UF72 201 aa10.43□□□□□ -0.74
COL4A1-201ENST00000375820 TRBV10-2A0A0K0K1G8 114 aa10.43□□□□□ -0.74
COL4A1-201ENST00000375820 IGLV2-14P01704 120 aa10.43□□□□□ -0.74
COL4A1-201ENST00000375820 ANAPC1Q9H1A4 1944 aa10.43□□□□□ -0.74
COL4A1-201ENST00000375820 UPK3BQ9BT76 320 aa10.42□□□□□ -0.74
COL4A1-201ENST00000375820 DENND4CQ5VZ89 1909 aa10.42□□□□□ -0.74
COL4A1-201ENST00000375820 A0A087WZ39 114 aa10.42□□□□□ -0.74
COL4A1-201ENST00000375820 HRCT1Q6UXD1 115 aa10.42□□□□□ -0.74
COL4A1-201ENST00000375820 ODF1Q14990 250 aa10.42□□□□□ -0.74
COL4A1-201ENST00000375820 CASC2Q6XLA1 102 aa10.42□□□□□ -0.74
COL4A1-201ENST00000375820 FAM19A1Q7Z5A9 133 aa10.42□□□□□ -0.74
COL4A1-201ENST00000375820 TRBV6-1A0A0K0K1D8 114 aa10.42□□□□□ -0.74
COL4A1-201ENST00000375820 ZNF80P51504 273 aaPredicted RBP10.42□□□□□ -0.74
COL4A1-201ENST00000375820 SDIM1Q6ZPB5 146 aa10.42□□□□□ -0.74
COL4A1-201ENST00000375820 NOTCH4Q99466 2003 aa10.42□□□□□ -0.74
COL4A1-201ENST00000375820 ADAMTS9Q9P2N4 1935 aa10.41□□□□□ -0.74
COL4A1-201ENST00000375820 MYCNOSP40205 109 aa10.41□□□□□ -0.74
COL4A1-201ENST00000375820 WFDC10BQ8IUB3 73 aa10.41□□□□□ -0.74
COL4A1-201ENST00000375820 FAM19A5Q7Z5A7 132 aaPredicted RBP10.41□□□□□ -0.74
COL4A1-201ENST00000375820 TMEM256-PLSCR3K7ERE1 68 aa10.41□□□□□ -0.74
COL4A1-201ENST00000375820 TCL1BO95988 128 aa10.41□□□□□ -0.74
COL4A1-201ENST00000375820 LINC00482Q8N8I6 264 aa10.41□□□□□ -0.74
COL4A1-201ENST00000375820 IGKV1D-37A0A075B6S9 117 aa10.41□□□□□ -0.74
COL4A1-201ENST00000375820 MSMPQ1L6U9 139 aa10.4□□□□□ -0.74
COL4A1-201ENST00000375820 REG3AQ06141 175 aa10.4□□□□□ -0.74
COL4A1-201ENST00000375820 PRO0255Q9UI72 69 aa10.4□□□□□ -0.74
COL4A1-201ENST00000375820 TNRC6AQ8NDV7 1962 aaKnown RBP10.4□□□□□ -0.74
COL4A1-201ENST00000375820 JMJD7-PLA2G4BH0Y9G9 81 aa10.4□□□□□ -0.74
COL4A1-201ENST00000375820 IGF1P05019 195 aa10.4□□□□□ -0.74
COL4A1-201ENST00000375820 KRTAP27-1Q3LI81 207 aa10.4□□□□□ -0.74
COL4A1-201ENST00000375820 Q8NFD4 153 aa10.4□□□□□ -0.74
COL4A1-201ENST00000375820 A0A0J9YX75 114 aa10.4□□□□□ -0.75
COL4A1-201ENST00000375820 A0A1W2PNU3 283 aaPredicted RBP10.39□□□□□ -0.75
COL4A1-201ENST00000375820 CREBBPQ92793 2442 aa10.39□□□□□ -0.75
COL4A1-201ENST00000375820 CRYGDP07320 174 aa10.39□□□□□ -0.75
COL4A1-201ENST00000375820 FAM222AQ5U5X8 452 aa10.39□□□□□ -0.75
COL4A1-201ENST00000375820 J3KT08 172 aa10.39□□□□□ -0.75
COL4A1-201ENST00000375820 M0R2N4 97 aa10.39□□□□□ -0.75
COL4A1-201ENST00000375820 LINC00467Q9BRT7 94 aa10.39□□□□□ -0.75
COL4A1-201ENST00000375820 IGFL2Q6UWQ7 119 aa10.38□□□□□ -0.75
COL4A1-201ENST00000375820 CTRLP40313 264 aa10.38□□□□□ -0.75
COL4A1-201ENST00000375820 CCDC140Q96MF4 163 aa10.38□□□□□ -0.75
COL4A1-201ENST00000375820 IGLV2-18A0A075B6J9 118 aa10.38□□□□□ -0.75
COL4A1-201ENST00000375820 ZFAND2AQ8N6M9 145 aa10.38□□□□□ -0.75
COL4A1-201ENST00000375820 BPY2O14599 106 aa10.38□□□□□ -0.75
COL4A1-201ENST00000375820 C19orf84I3L1E1 186 aa10.38□□□□□ -0.75
COL4A1-201ENST00000375820 CXCL5P42830 114 aa10.38□□□□□ -0.75
COL4A1-201ENST00000375820 NDUFA11Q86Y39 141 aa10.38□□□□□ -0.75
COL4A1-201ENST00000375820 C20orf203Q8NBC4 194 aa10.38□□□□□ -0.75
COL4A1-201ENST00000375820 XAGE1AQ9HD64 81 aa10.38□□□□□ -0.75
COL4A1-201ENST00000375820 K7EMT4 169 aa10.37□□□□□ -0.75
COL4A1-201ENST00000375820 LINC00322Q6ZN03 302 aaPredicted RBP10.37□□□□□ -0.75
COL4A1-201ENST00000375820 INAFM1C9JVW0 142 aa10.37□□□□□ -0.75
COL4A1-201ENST00000375820 PPDPFQ9H3Y8 114 aa10.37□□□□□ -0.75
COL4A1-201ENST00000375820 OBSL1O75147 1896 aa10.37□□□□□ -0.75
COL4A1-201ENST00000375820 LINC00526Q96FQ7 95 aa10.37□□□□□ -0.75
COL4A1-201ENST00000375820 TEX49A0A1B0GTD5 131 aa10.37□□□□□ -0.75
COL4A1-201ENST00000375820 PROK1P58294 105 aa10.37□□□□□ -0.75
COL4A1-201ENST00000375820 IGLV1-47P01700 117 aa10.36□□□□□ -0.75
COL4A1-201ENST00000375820 PIK3CD-AS1Q5SR53 167 aa10.36□□□□□ -0.75
COL4A1-201ENST00000375820 CHCHD10Q8WYQ3 142 aaPredicted RBP10.36□□□□□ -0.75
COL4A1-201ENST00000375820 C20orf173Q96LM9 149 aa10.36□□□□□ -0.75
COL4A1-201ENST00000375820 A6NDX4 124 aa10.36□□□□□ -0.75
COL4A1-201ENST00000375820 MIAQ16674 131 aa10.36□□□□□ -0.75
COL4A1-201ENST00000375820 A0A0J9YXY3 114 aa10.36□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 111.8 ms