RNA–Protein interactions for RNA: ENST00000374877.7

CCDC40-203, Transcript of coiled-coil domain containing 40, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CCDC40, Length 3,544 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-203ENST00000374877 MAP1AP78559 2803 aaPredicted RBP8.28□□□□□ -1.08
CCDC40-203ENST00000374877 TRAV12-3A0A0B4J271 114 aa8.28□□□□□ -1.08
CCDC40-203ENST00000374877 FAM19A4Q96LR4 140 aa8.28□□□□□ -1.08
CCDC40-203ENST00000374877 SLC25A20O43772 301 aa8.28□□□□□ -1.08
CCDC40-203ENST00000374877 PF4V1P10720 104 aa8.28□□□□□ -1.08
CCDC40-203ENST00000374877 LY6EQ16553 131 aa8.28□□□□□ -1.08
CCDC40-203ENST00000374877 Q1RN00 199 aa8.28□□□□□ -1.08
CCDC40-203ENST00000374877 ZNF876PQ49A33 203 aa8.28□□□□□ -1.08
CCDC40-203ENST00000374877 BRD3OSQ6XYD6 125 aa8.28□□□□□ -1.08
CCDC40-203ENST00000374877 TRPT1Q86TN4 253 aaKnown RBP8.28□□□□□ -1.08
CCDC40-203ENST00000374877 ZNF56Q15929 161 aa8.27□□□□□ -1.09
CCDC40-203ENST00000374877 CRIP2P52943 208 aaPredicted RBP8.27□□□□□ -1.09
CCDC40-203ENST00000374877 RNF183Q96D59 192 aa8.27□□□□□ -1.09
CCDC40-203ENST00000374877 Q96MF0 132 aa8.27□□□□□ -1.09
CCDC40-203ENST00000374877 VCX2Q9H322 139 aa8.27□□□□□ -1.09
CCDC40-203ENST00000374877 NXPH4O95158 308 aa8.26□□□□□ -1.09
CCDC40-203ENST00000374877 POM121L12Q8N7R1 296 aa8.26□□□□□ -1.09
CCDC40-203ENST00000374877 AMELXQ99217 191 aa8.26□□□□□ -1.09
CCDC40-203ENST00000374877 CELSR1Q9NYQ6 3014 aa8.26□□□□□ -1.09
CCDC40-203ENST00000374877 IGKV3-20P01619 116 aa8.26□□□□□ -1.09
CCDC40-203ENST00000374877 IGHV4-31P0DP07 118 aa8.26□□□□□ -1.09
CCDC40-203ENST00000374877 RPL32P62910 135 aaKnown RBP8.26□□□□□ -1.09
CCDC40-203ENST00000374877 SBSPONQ8IVN8 264 aa8.26□□□□□ -1.09
CCDC40-203ENST00000374877 ANAPC13Q9BS18 74 aa8.26□□□□□ -1.09
CCDC40-203ENST00000374877 APRG1Q8IVJ8 170 aa8.26□□□□□ -1.09
CCDC40-203ENST00000374877 ERG28Q9UKR5 140 aa8.26□□□□□ -1.09
CCDC40-203ENST00000374877 FBN2P35556 2912 aa8.26□□□□□ -1.09
CCDC40-203ENST00000374877 ZFHX3Q15911 3703 aa8.26□□□□□ -1.09
CCDC40-203ENST00000374877 TENM4Q6N022 2769 aa8.25□□□□□ -1.09
CCDC40-203ENST00000374877 EDN2P20800 178 aa8.25□□□□□ -1.09
CCDC40-203ENST00000374877 C19orf54Q5BKX5 351 aa8.25□□□□□ -1.09
CCDC40-203ENST00000374877 TRBV27A0A0K0K1C4 114 aa8.25□□□□□ -1.09
CCDC40-203ENST00000374877 TMEM262E9PQX1 116 aa8.25□□□□□ -1.09
CCDC40-203ENST00000374877 ZFAND6Q6FIF0 208 aa8.25□□□□□ -1.09
CCDC40-203ENST00000374877 TEX29Q8N6K0 151 aa8.25□□□□□ -1.09
CCDC40-203ENST00000374877 KLLNB2CW77 178 aa8.24□□□□□ -1.09
CCDC40-203ENST00000374877 IGHV3-33P01772 117 aa8.24□□□□□ -1.09
CCDC40-203ENST00000374877 MUSTN1Q8IVN3 82 aa8.24□□□□□ -1.09
CCDC40-203ENST00000374877 TRAV12-2A0A075B6T6 113 aa8.24□□□□□ -1.09
CCDC40-203ENST00000374877 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP8.24□□□□□ -1.094e-7■■■■□ 19.8
CCDC40-203ENST00000374877 SORL1Q92673 2214 aa8.24□□□□□ -1.09
CCDC40-203ENST00000374877 LEPROTO15243 131 aa8.24□□□□□ -1.09
CCDC40-203ENST00000374877 EIF4EBP3O60516 100 aaPredicted RBP8.24□□□□□ -1.09
CCDC40-203ENST00000374877 MDFICQ9P1T7 246 aa8.24□□□□□ -1.09
CCDC40-203ENST00000374877 TRBV7-9A0A0J9YWB2 115 aa8.23□□□□□ -1.09
CCDC40-203ENST00000374877 IGHV4-38-2P0DP08 117 aa8.23□□□□□ -1.09
CCDC40-203ENST00000374877 NTN5Q8WTR8 489 aaPredicted RBP8.23□□□□□ -1.09
CCDC40-203ENST00000374877 DAZ1Q9NQZ3 744 aaKnown RBP8.23□□□□□ -1.09
CCDC40-203ENST00000374877 ZNF580Q9UK33 172 aa8.23□□□□□ -1.09
CCDC40-203ENST00000374877 DOPEY2Q9Y3R5 2298 aa8.23□□□□□ -1.09
CCDC40-203ENST00000374877 ABCA2Q9BZC7 2435 aa8.23□□□□□ -1.09
CCDC40-203ENST00000374877 A0A0J9YXV3 536 aa8.23□□□□□ -1.09
CCDC40-203ENST00000374877 TMEM223A0PJW6 202 aa8.23□□□□□ -1.09
CCDC40-203ENST00000374877 ADARB2-AS1A8MUL3 147 aa8.23□□□□□ -1.09
CCDC40-203ENST00000374877 LGALS9O00182 355 aa8.23□□□□□ -1.09
CCDC40-203ENST00000374877 TMEM263Q8WUH6 116 aaKnown RBP8.23□□□□□ -1.09
CCDC40-203ENST00000374877 FSHBP01225 129 aa8.23□□□□□ -1.09
CCDC40-203ENST00000374877 USMG5Q96IX5 58 aa8.23□□□□□ -1.09
CCDC40-203ENST00000374877 SPG11Q96JI7 2443 aa8.22□□□□□ -1.09
CCDC40-203ENST00000374877 ELANEP08246 267 aa8.22□□□□□ -1.09
CCDC40-203ENST00000374877 ZNF22P17026 224 aaPredicted RBP8.22□□□□□ -1.09
CCDC40-203ENST00000374877 ID1P41134 155 aa8.22□□□□□ -1.09
CCDC40-203ENST00000374877 UTP20O75691 2785 aaKnown RBP8.22□□□□□ -1.09
CCDC40-203ENST00000374877 PTPN13Q12923 2485 aa8.22□□□□□ -1.09
CCDC40-203ENST00000374877 AVPP01185 164 aa8.22□□□□□ -1.09
CCDC40-203ENST00000374877 TRBV6-5A0A0K0K1A5 114 aa8.21□□□□□ -1.09
CCDC40-203ENST00000374877 M0QY20 66 aa8.21□□□□□ -1.09
CCDC40-203ENST00000374877 RHODO00212 210 aa8.21□□□□□ -1.09
CCDC40-203ENST00000374877 PRSS2P07478 247 aa8.21□□□□□ -1.09
CCDC40-203ENST00000374877 BLCAPP62952 87 aa8.21□□□□□ -1.09
CCDC40-203ENST00000374877 WFDC11Q8NEX6 87 aa8.21□□□□□ -1.09
CCDC40-203ENST00000374877 CREBBPQ92793 2442 aa8.21□□□□□ -1.09
CCDC40-203ENST00000374877 P0DMU3 169 aa8.21□□□□□ -1.1
CCDC40-203ENST00000374877 FAM231AP0DMU4 169 aa8.21□□□□□ -1.1
CCDC40-203ENST00000374877 FAM231CP0DMU5 169 aa8.21□□□□□ -1.1
CCDC40-203ENST00000374877 SPXQ9BT56 116 aa8.21□□□□□ -1.1
CCDC40-203ENST00000374877 HELZ2Q9BYK8 2649 aaKnown RBP8.21□□□□□ -1.1
CCDC40-203ENST00000374877 A0A0B4J2C4 111 aa8.21□□□□□ -1.1
CCDC40-203ENST00000374877 H3BUX3 64 aa8.21□□□□□ -1.1
CCDC40-203ENST00000374877 SNCGO76070 127 aa8.21□□□□□ -1.1
CCDC40-203ENST00000374877 ATXN8Q156A1 80 aa8.21□□□□□ -1.1
CCDC40-203ENST00000374877 MAPK1IP1LQ8NDC0 245 aa8.21□□□□□ -1.1
CCDC40-203ENST00000374877 TRAV16A0A0A6YYK6 109 aaPredicted RBP8.2□□□□□ -1.1
CCDC40-203ENST00000374877 IGHV3-16A0A0C4DH30 117 aa8.2□□□□□ -1.1
CCDC40-203ENST00000374877 RHOHQ15669 191 aa8.2□□□□□ -1.1
CCDC40-203ENST00000374877 NSUN5P1Q3KNT7 163 aa8.2□□□□□ -1.1
CCDC40-203ENST00000374877 Q8N1Y9 231 aa8.2□□□□□ -1.1
CCDC40-203ENST00000374877 GAGE2BQ13066 116 aa8.2□□□□□ -1.1
CCDC40-203ENST00000374877 LINC01620Q4KN68 170 aa8.2□□□□□ -1.1
CCDC40-203ENST00000374877 GAGE2EQ4V326 116 aa8.2□□□□□ -1.1
CCDC40-203ENST00000374877 C20orf203Q8NBC4 194 aa8.2□□□□□ -1.1
CCDC40-203ENST00000374877 GAGE2DQ9UEU5 116 aa8.2□□□□□ -1.1
CCDC40-203ENST00000374877 SS18L2Q9UHA2 77 aa8.2□□□□□ -1.1
CCDC40-203ENST00000374877 NAV2Q8IVL1 2488 aa8.19□□□□□ -1.1
CCDC40-203ENST00000374877 A0A0J9YXY3 114 aa8.19□□□□□ -1.1
CCDC40-203ENST00000374877 TEX49A0A1B0GTD5 131 aa8.19□□□□□ -1.1
CCDC40-203ENST00000374877 SPINK13Q1W4C9 94 aa8.19□□□□□ -1.1
CCDC40-203ENST00000374877 DCANP1Q8TF63 244 aa8.19□□□□□ -1.1
CCDC40-203ENST00000374877 ANKRD17O75179 2603 aaKnown RBP8.19□□□□□ -1.1
CCDC40-203ENST00000374877 IGLV4-3A0A075B6K6 122 aa8.19□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 154.7 ms