RNA–Protein interactions for RNA: ENST00000374732.7

USP48-203, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 2 BASIC

Gene USP48, Length 3,037 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-203ENST00000374732 IGKV1-6A0A0C4DH72 117 aa5.75□□□□□ -1.49
USP48-203ENST00000374732 IGKV1D-33P01593 117 aa5.75□□□□□ -1.49
USP48-203ENST00000374732 IGKV1-33P01594 117 aa5.75□□□□□ -1.49
USP48-203ENST00000374732 SYCNQ0VAF6 134 aa5.75□□□□□ -1.49
USP48-203ENST00000374732 SND1-IT1Q9HBX3 110 aa5.75□□□□□ -1.49
USP48-203ENST00000374732 DKK2Q9UBU2 259 aa5.75□□□□□ -1.49
USP48-203ENST00000374732 DSCAML1Q8TD84 2053 aa5.75□□□□□ -1.49
USP48-203ENST00000374732 IGKV3-15P01624 115 aa5.75□□□□□ -1.49
USP48-203ENST00000374732 ZNF497Q6ZNH5 498 aa5.75□□□□□ -1.49
USP48-203ENST00000374732 SCO2A0A1W2PP80 73 aa5.74□□□□□ -1.49
USP48-203ENST00000374732 SH2D1AO60880 128 aa5.74□□□□□ -1.49
USP48-203ENST00000374732 NRACQ8N912 160 aa5.74□□□□□ -1.49
USP48-203ENST00000374732 CD24P25063 80 aa5.74□□□□□ -1.49
USP48-203ENST00000374732 KLKP1Q107X0 134 aa5.74□□□□□ -1.49
USP48-203ENST00000374732 ZGRF1Q86YA3 2104 aa5.74□□□□□ -1.49
USP48-203ENST00000374732 FDCSPQ8NFU4 85 aa5.74□□□□□ -1.49
USP48-203ENST00000374732 PRSS3P2Q8NHM4 247 aa5.74□□□□□ -1.49
USP48-203ENST00000374732 FREM1Q5H8C1 2179 aa5.74□□□□□ -1.49
USP48-203ENST00000374732 NDUFA12Q9UI09 145 aa5.74□□□□□ -1.49
USP48-203ENST00000374732 RTTNQ86VV8 2226 aa5.74□□□□□ -1.49
USP48-203ENST00000374732 ZDBF2Q9HCK1 2354 aa5.73□□□□□ -1.49
USP48-203ENST00000374732 IGKV3D-7A0A0C4DH55 119 aa5.73□□□□□ -1.49
USP48-203ENST00000374732 C16orf90A8MZG2 172 aa5.73□□□□□ -1.49
USP48-203ENST00000374732 IGLV1-44P01699 117 aa5.73□□□□□ -1.49
USP48-203ENST00000374732 Q1T7F1 81 aa5.73□□□□□ -1.49
USP48-203ENST00000374732 ORMDL3Q8N138 153 aa5.73□□□□□ -1.49
USP48-203ENST00000374732 RMI2Q96E14 147 aa5.73□□□□□ -1.49
USP48-203ENST00000374732 CCL28Q9NRJ3 127 aa5.73□□□□□ -1.49
USP48-203ENST00000374732 SNURFQ9Y675 71 aa5.73□□□□□ -1.49
USP48-203ENST00000374732 SCXQ7RTU7 201 aa5.73□□□□□ -1.49
USP48-203ENST00000374732 INTS1Q8N201 2190 aaKnown RBP5.73□□□□□ -1.49
USP48-203ENST00000374732 WDR87Q6ZQQ6 2873 aa5.73□□□□□ -1.49
USP48-203ENST00000374732 IGLV2-8P01709 118 aa5.72□□□□□ -1.49
USP48-203ENST00000374732 SEC61BP60468 96 aaKnown RBP5.72□□□□□ -1.49
USP48-203ENST00000374732 DYNAPQ8N1N2 210 aa5.72□□□□□ -1.49
USP48-203ENST00000374732 KLF14Q8TD94 323 aaPredicted RBP5.72□□□□□ -1.49
USP48-203ENST00000374732 C9JCJ5 164 aa5.72□□□□□ -1.49
USP48-203ENST00000374732 H7C423 109 aa5.72□□□□□ -1.49
USP48-203ENST00000374732 LEPROTO15243 131 aa5.72□□□□□ -1.49
USP48-203ENST00000374732 CD28P10747 220 aa5.72□□□□□ -1.49
USP48-203ENST00000374732 PATE2Q6UY27 113 aa5.72□□□□□ -1.49
USP48-203ENST00000374732 TIMM21Q9BVV7 248 aa5.72□□□□□ -1.49
USP48-203ENST00000374732 IGLV2-14P01704 120 aa5.72□□□□□ -1.49
USP48-203ENST00000374732 BAALC-AS2P0C853 105 aa5.72□□□□□ -1.49
USP48-203ENST00000374732 RPRMLQ8N4K4 120 aa5.72□□□□□ -1.49
USP48-203ENST00000374732 C9orf106Q8NAJ2 232 aa5.72□□□□□ -1.49
USP48-203ENST00000374732 PRO1854Q9UHT4 67 aa5.72□□□□□ -1.49
USP48-203ENST00000374732 NDUFC1O43677 76 aa5.71□□□□□ -1.5
USP48-203ENST00000374732 FBXL19-AS1Q494R0 122 aa5.71□□□□□ -1.5
USP48-203ENST00000374732 USP24Q9UPU5 2620 aa5.71□□□□□ -1.5
USP48-203ENST00000374732 SHANK1Q9Y566 2161 aa5.71□□□□□ -1.5
USP48-203ENST00000374732 IGHV3OR16-13A0A075B7E8 117 aa5.71□□□□□ -1.5
USP48-203ENST00000374732 ZNHIT1O43257 154 aa5.71□□□□□ -1.5
USP48-203ENST00000374732 CFAP54Q96N23 3096 aa5.7□□□□□ -1.5
USP48-203ENST00000374732 ARHGAP32A7KAX9 2087 aa5.7□□□□□ -1.5
USP48-203ENST00000374732 TMEM223A0PJW6 202 aa5.7□□□□□ -1.5
USP48-203ENST00000374732 LINC00473A8K010 186 aa5.7□□□□□ -1.5
USP48-203ENST00000374732 B4DSR2 109 aa5.7□□□□□ -1.5
USP48-203ENST00000374732 Q6ZRP5 223 aa5.7□□□□□ -1.5
USP48-203ENST00000374732 TXNDC17Q9BRA2 123 aa5.7□□□□□ -1.5
USP48-203ENST00000374732 EIF4EBP1Q13541 118 aaPredicted RBP5.7□□□□□ -1.5
USP48-203ENST00000374732 CNEP1R1Q8N9A8 125 aa5.7□□□□□ -1.5
USP48-203ENST00000374732 FRYLO94915 3013 aa5.7□□□□□ -1.5
USP48-203ENST00000374732 IGLV3-9A0A075B6K5 115 aa5.69□□□□□ -1.5
USP48-203ENST00000374732 TRAV3A0A0B4J244 114 aa5.69□□□□□ -1.5
USP48-203ENST00000374732 H7C2G1 150 aa5.69□□□□□ -1.5
USP48-203ENST00000374732 EIF4EBP3O60516 100 aaPredicted RBP5.69□□□□□ -1.5
USP48-203ENST00000374732 DEFB109BQ30KR1 87 aa5.69□□□□□ -1.5
USP48-203ENST00000374732 ZNF580Q9UK33 172 aa5.69□□□□□ -1.5
USP48-203ENST00000374732 PHLDA3Q9Y5J5 127 aa5.69□□□□□ -1.5
USP48-203ENST00000374732 DMDP11532 3685 aa5.69□□□□□ -1.5
USP48-203ENST00000374732 VPS13AQ96RL7 3174 aa5.69□□□□□ -1.5
USP48-203ENST00000374732 IGHV1-18A0A0C4DH31 117 aa5.69□□□□□ -1.5
USP48-203ENST00000374732 HCG22E2RYF7 251 aa5.69□□□□□ -1.5
USP48-203ENST00000374732 CDK2AP2O75956 126 aa5.69□□□□□ -1.5
USP48-203ENST00000374732 IGKV1-39P01597 117 aa5.69□□□□□ -1.5
USP48-203ENST00000374732 IGKV1D-39P04432 117 aa5.69□□□□□ -1.5
USP48-203ENST00000374732 SPINK2P20155 84 aa5.69□□□□□ -1.5
USP48-203ENST00000374732 C8orf49Q96NF6 230 aa5.69□□□□□ -1.5
USP48-203ENST00000374732 UBE2D4Q9Y2X8 147 aa5.69□□□□□ -1.5
USP48-203ENST00000374732 P0C879 139 aa5.68□□□□□ -1.5
USP48-203ENST00000374732 CFC1BP0CG36 223 aa5.68□□□□□ -1.5
USP48-203ENST00000374732 CFC1P0CG37 223 aa5.68□□□□□ -1.5
USP48-203ENST00000374732 TMEM141Q96I45 108 aa5.68□□□□□ -1.5
USP48-203ENST00000374732 PRAC1Q96KF2 57 aa5.68□□□□□ -1.5
USP48-203ENST00000374732 C11orf21Q9P2W6 132 aa5.68□□□□□ -1.5
USP48-203ENST00000374732 AHCTF1Q8WYP5 2266 aa5.68□□□□□ -1.5
USP48-203ENST00000374732 TRAV23DV6A0A075B6W5 121 aa5.68□□□□□ -1.5
USP48-203ENST00000374732 TRAV22A0A0B4J277 110 aa5.68□□□□□ -1.5
USP48-203ENST00000374732 IGHV3-13P01766 116 aa5.68□□□□□ -1.5
USP48-203ENST00000374732 PLGLAQ15195 96 aa5.68□□□□□ -1.5
USP48-203ENST00000374732 Q8N6K4 173 aa5.68□□□□□ -1.5
USP48-203ENST00000374732 ZNF525Q8N782 197 aa5.68□□□□□ -1.5
USP48-203ENST00000374732 TET2Q6N021 2002 aaPredicted RBP5.68□□□□□ -1.5
USP48-203ENST00000374732 TRGV8A0A0C4DH27 118 aa5.67□□□□□ -1.5
USP48-203ENST00000374732 MRPL51Q4U2R6 128 aaKnown RBP5.67□□□□□ -1.5
USP48-203ENST00000374732 Q6JHZ5 121 aa5.67□□□□□ -1.5
USP48-203ENST00000374732 FAM168AQ92567 244 aa5.67□□□□□ -1.5
USP48-203ENST00000374732 ZNF702PQ9H963 129 aa5.67□□□□□ -1.5
USP48-203ENST00000374732 A0A096LNJ9 63 aa5.67□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 7.3 ms