RNA–Protein interactions for RNA: ENST00000374198.4

PRPF4-201, Transcript of pre-mRNA processing factor 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PRPF4, Length 2,787 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4-201ENST00000374198 FAM27E3Q08E93 113 aa9.69□□□□□ -0.86
PRPF4-201ENST00000374198 TENM4Q6N022 2769 aa9.69□□□□□ -0.86
PRPF4-201ENST00000374198 IGHV4OR15-8A0A075B7B6 117 aa9.69□□□□□ -0.86
PRPF4-201ENST00000374198 A0A087WW49 117 aa9.69□□□□□ -0.86
PRPF4-201ENST00000374198 OR13C6PQ8NH95 151 aa9.69□□□□□ -0.86
PRPF4-201ENST00000374198 UBR5O95071 2799 aaPredicted RBP9.68□□□□□ -0.86
PRPF4-201ENST00000374198 VCYO14598 125 aa9.68□□□□□ -0.86
PRPF4-201ENST00000374198 NDPQ00604 133 aa9.68□□□□□ -0.86
PRPF4-201ENST00000374198 LINC00643Q86TS7 51 aa9.68□□□□□ -0.86
PRPF4-201ENST00000374198 TMEM219Q86XT9 240 aa9.68□□□□□ -0.86
PRPF4-201ENST00000374198 SPANXCQ9NY87 97 aa9.68□□□□□ -0.86
PRPF4-201ENST00000374198 SPENQ96T58 3664 aaKnown RBP9.68□□□□□ -0.86
PRPF4-201ENST00000374198 IGHV3OR16-13A0A075B7E8 117 aa9.68□□□□□ -0.86
PRPF4-201ENST00000374198 IGHV3-74A0A0B4J1X5 117 aa9.68□□□□□ -0.86
PRPF4-201ENST00000374198 SMCR5Q8TEV8 140 aa9.68□□□□□ -0.86
PRPF4-201ENST00000374198 EDA2RQ9HAV5 297 aa9.68□□□□□ -0.86
PRPF4-201ENST00000374198 COX7CP15954 63 aa9.67□□□□□ -0.86
PRPF4-201ENST00000374198 LITAFQ99732 161 aa9.67□□□□□ -0.86
PRPF4-201ENST00000374198 POLEQ07864 2286 aa9.67□□□□□ -0.86
PRPF4-201ENST00000374198 PRSS2P07478 247 aa9.67□□□□□ -0.86
PRPF4-201ENST00000374198 GAGE2AQ6NT46 116 aa9.67□□□□□ -0.86
PRPF4-201ENST00000374198 LENEPQ9Y5L5 61 aa9.67□□□□□ -0.86
PRPF4-201ENST00000374198 TRAV21A0A0B4J279 112 aa9.66□□□□□ -0.86
PRPF4-201ENST00000374198 CLPSL1A2RUU4 121 aa9.66□□□□□ -0.86
PRPF4-201ENST00000374198 MED14OSP0DP75 135 aa9.66□□□□□ -0.86
PRPF4-201ENST00000374198 LINC00315P59091 139 aa9.66□□□□□ -0.86
PRPF4-201ENST00000374198 HIVEP3Q5T1R4 2406 aa9.66□□□□□ -0.86
PRPF4-201ENST00000374198 TRAV8-3A0A0A6YYJ7 113 aa9.66□□□□□ -0.86
PRPF4-201ENST00000374198 I3L3M4 83 aa9.66□□□□□ -0.86
PRPF4-201ENST00000374198 EEF1AKMT3Q96AZ1 226 aa9.66□□□□□ -0.86
PRPF4-201ENST00000374198 OPRPNQ99935 248 aaPredicted RBP9.66□□□□□ -0.86
PRPF4-201ENST00000374198 KIF25-AS1Q9Y6Z4 181 aa9.66□□□□□ -0.86
PRPF4-201ENST00000374198 FLNCQ14315 2725 aa9.66□□□□□ -0.86
PRPF4-201ENST00000374198 CCL21O00585 134 aa9.65□□□□□ -0.86
PRPF4-201ENST00000374198 PF4V1P10720 104 aa9.65□□□□□ -0.86
PRPF4-201ENST00000374198 CRYGAP11844 174 aa9.65□□□□□ -0.86
PRPF4-201ENST00000374198 ZFAND2AQ8N6M9 145 aa9.65□□□□□ -0.86
PRPF4-201ENST00000374198 ZNF580Q9UK33 172 aa9.65□□□□□ -0.86
PRPF4-201ENST00000374198 IGHV1-69P01742 117 aa9.65□□□□□ -0.86
PRPF4-201ENST00000374198 Q6ZSV7 163 aa9.65□□□□□ -0.86
PRPF4-201ENST00000374198 DOPEY2Q9Y3R5 2298 aa9.65□□□□□ -0.86
PRPF4-201ENST00000374198 LRRK2Q5S007 2527 aa9.64□□□□□ -0.87
PRPF4-201ENST00000374198 IGHV3-49A0A0A0MS15 119 aa9.64□□□□□ -0.87
PRPF4-201ENST00000374198 C2orf48Q96LS8 159 aa9.64□□□□□ -0.87
PRPF4-201ENST00000374198 FAM215AQ9Y5M1 114 aa9.64□□□□□ -0.87
PRPF4-201ENST00000374198 ADARB2-AS1A8MUL3 147 aa9.64□□□□□ -0.87
PRPF4-201ENST00000374198 GNRH2O43555 120 aa9.64□□□□□ -0.87
PRPF4-201ENST00000374198 RNASE3P12724 160 aaKnown RBP9.64□□□□□ -0.87
PRPF4-201ENST00000374198 DCANP1Q8TF63 244 aa9.64□□□□□ -0.87
PRPF4-201ENST00000374198 DPM3Q9P2X0 92 aa9.64□□□□□ -0.87
PRPF4-201ENST00000374198 RELNP78509 3460 aa9.64□□□□□ -0.87
PRPF4-201ENST00000374198 CXCL5P42830 114 aa9.63□□□□□ -0.87
PRPF4-201ENST00000374198 ADAMTSL4-AS1Q5T5F5 129 aa9.63□□□□□ -0.87
PRPF4-201ENST00000374198 SUMO4Q6EEV6 95 aa9.63□□□□□ -0.87
PRPF4-201ENST00000374198 C5orf38Q86SI9 138 aa9.63□□□□□ -0.87
PRPF4-201ENST00000374198 TRBV27A0A0K0K1C4 114 aa9.63□□□□□ -0.87
PRPF4-201ENST00000374198 SDIM1Q6ZPB5 146 aa9.63□□□□□ -0.87
PRPF4-201ENST00000374198 C16orf92Q96LL3 132 aa9.63□□□□□ -0.87
PRPF4-201ENST00000374198 USP9XQ93008 2570 aaPredicted RBP9.63□□□□□ -0.87
PRPF4-201ENST00000374198 C15orf32Q32M92 178 aa9.63□□□□□ -0.87
PRPF4-201ENST00000374198 RNASE6Q93091 150 aaKnown RBP9.63□□□□□ -0.87
PRPF4-201ENST00000374198 LINC00477Q96M19 166 aa9.63□□□□□ -0.87
PRPF4-201ENST00000374198 A0A0J9YXV3 536 aa9.62□□□□□ -0.87
PRPF4-201ENST00000374198 NXPH4O95158 308 aa9.62□□□□□ -0.87
PRPF4-201ENST00000374198 IGHV3-30-3P0DP02 117 aa9.62□□□□□ -0.87
PRPF4-201ENST00000374198 TRAV41A0A0B4J266 112 aa9.62□□□□□ -0.87
PRPF4-201ENST00000374198 BSPH1Q075Z2 132 aa9.62□□□□□ -0.87
PRPF4-201ENST00000374198 TMEM61Q8N0U2 210 aa9.62□□□□□ -0.87
PRPF4-201ENST00000374198 C20orf173Q96LM9 149 aa9.62□□□□□ -0.87
PRPF4-201ENST00000374198 MIAQ16674 131 aa9.61□□□□□ -0.87
PRPF4-201ENST00000374198 DUX5Q96PT3 197 aa9.61□□□□□ -0.87
PRPF4-201ENST00000374198 OVOL1O14753 267 aa9.61□□□□□ -0.87
PRPF4-201ENST00000374198 ITLN2Q8WWU7 325 aaPredicted RBP9.61□□□□□ -0.87
PRPF4-201ENST00000374198 JPT2Q9H910 190 aa9.61□□□□□ -0.87
PRPF4-201ENST00000374198 DYNLRB1Q9NP97 96 aa9.61□□□□□ -0.87
PRPF4-201ENST00000374198 F5H697 171 aa9.6□□□□□ -0.87
PRPF4-201ENST00000374198 RNASE4P34096 147 aaKnown RBP9.6□□□□□ -0.87
PRPF4-201ENST00000374198 SPTBN1Q01082 2364 aaKnown RBP9.6□□□□□ -0.87
PRPF4-201ENST00000374198 ROS1P08922 2347 aa9.6□□□□□ -0.87
PRPF4-201ENST00000374198 hADV29S1A0JD25 119 aa9.6□□□□□ -0.87
PRPF4-201ENST00000374198 NPC2P61916 151 aa9.6□□□□□ -0.87
PRPF4-201ENST00000374198 VMO1Q7Z5L0 202 aa9.6□□□□□ -0.87
PRPF4-201ENST00000374198 TIMM21Q9BVV7 248 aa9.6□□□□□ -0.87
PRPF4-201ENST00000374198 FLNBO75369 2602 aaKnown RBP9.6□□□□□ -0.87
PRPF4-201ENST00000374198 SPTAN1Q13813 2472 aaKnown RBP9.6□□□□□ -0.87
PRPF4-201ENST00000374198 HECTD1Q9ULT8 2610 aa9.59□□□□□ -0.87
PRPF4-201ENST00000374198 TRBV6-5A0A0K0K1A5 114 aa9.59□□□□□ -0.87
PRPF4-201ENST00000374198 TRACP01848 142 aa9.59□□□□□ -0.87
PRPF4-201ENST00000374198 NSUN5P1Q3KNT7 163 aa9.59□□□□□ -0.87
PRPF4-201ENST00000374198 C9orf139Q6ZV77 190 aa9.59□□□□□ -0.87
PRPF4-201ENST00000374198 PTPN13Q12923 2485 aa9.59□□□□□ -0.87
PRPF4-201ENST00000374198 A0A087WWL8 130 aa9.59□□□□□ -0.87
PRPF4-201ENST00000374198 ATOX1O00244 68 aa9.59□□□□□ -0.87
PRPF4-201ENST00000374198 HIST1H4AP62805 103 aaKnown RBP9.59□□□□□ -0.87
PRPF4-201ENST00000374198 PEMTQ9UBM1 199 aa9.59□□□□□ -0.87
PRPF4-201ENST00000374198 RHOHQ15669 191 aa9.58□□□□□ -0.88
PRPF4-201ENST00000374198 CLEC19AQ6UXS0 136 aa9.58□□□□□ -0.88
PRPF4-201ENST00000374198 U3KQE9 123 aa9.58□□□□□ -0.88
PRPF4-201ENST00000374198 IGHV7-81A0A0B4J1V7 117 aa9.58□□□□□ -0.88
PRPF4-201ENST00000374198 ADORA2A-AS1P86434 159 aa9.58□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 127.7 ms